Result of FASTA (omim) for
pFN21AE3004
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3004, 76 aa
1>>>pF1KE3004 76 - 76 aa - 76 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2279+/-0.000256; mu= 7.9586+/- 0.016
mean_var=58.7190+/-11.614, 0's: 0 Z-trim(120.4): 36 B-trim: 640 in 1/50
Lambda= 0.167373
statistics sampled from 35451 (35493) to 35451 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.81), E-opt: 0.2 (0.416), width: 16
Scan time: 4.200
The best scores are: opt bits E(85289)
NP_001268374 (OMIM: 604932) cAMP-dependent protein ( 76) 493 126.2 4.9e-30
NP_008997 (OMIM: 604932) cAMP-dependent protein ki ( 76) 493 126.2 4.9e-30
NP_861520 (OMIM: 604932) cAMP-dependent protein ki ( 76) 493 126.2 4.9e-30
XP_016883105 (OMIM: 604932) PREDICTED: cAMP-depend ( 76) 493 126.2 4.9e-30
XP_016883104 (OMIM: 604932) PREDICTED: cAMP-depend ( 76) 493 126.2 4.9e-30
XP_016883103 (OMIM: 604932) PREDICTED: cAMP-depend ( 76) 493 126.2 4.9e-30
NP_861521 (OMIM: 604932) cAMP-dependent protein ki ( 76) 493 126.2 4.9e-30
NP_001268373 (OMIM: 604932) cAMP-dependent protein ( 76) 493 126.2 4.9e-30
NP_862822 (OMIM: 606059) cAMP-dependent protein ki ( 76) 141 41.3 0.00019
XP_016869109 (OMIM: 606059) PREDICTED: cAMP-depend ( 76) 141 41.3 0.00019
NP_006814 (OMIM: 606059) cAMP-dependent protein ki ( 76) 141 41.3 0.00019
XP_016869111 (OMIM: 606059) PREDICTED: cAMP-depend ( 76) 141 41.3 0.00019
XP_016869110 (OMIM: 606059) PREDICTED: cAMP-depend ( 76) 141 41.3 0.00019
XP_011534238 (OMIM: 606914) PREDICTED: cAMP-depend ( 78) 119 35.9 0.0076
NP_115860 (OMIM: 606914) cAMP-dependent protein ki ( 78) 119 35.9 0.0076
NP_861460 (OMIM: 606914) cAMP-dependent protein ki ( 78) 119 35.9 0.0076
NP_861459 (OMIM: 606914) cAMP-dependent protein ki ( 78) 119 35.9 0.0076
XP_011534237 (OMIM: 606914) PREDICTED: cAMP-depend ( 78) 119 35.9 0.0076
XP_011534239 (OMIM: 606914) PREDICTED: cAMP-depend ( 78) 119 35.9 0.0076
NP_001257322 (OMIM: 606914) cAMP-dependent protein ( 78) 119 35.9 0.0076
XP_011534233 (OMIM: 606914) PREDICTED: cAMP-depend ( 85) 119 36.0 0.0082
XP_011534236 (OMIM: 606914) PREDICTED: cAMP-depend ( 85) 119 36.0 0.0082
XP_011534232 (OMIM: 606914) PREDICTED: cAMP-depend ( 85) 119 36.0 0.0082
XP_011534235 (OMIM: 606914) PREDICTED: cAMP-depend ( 85) 119 36.0 0.0082
XP_011534234 (OMIM: 606914) PREDICTED: cAMP-depend ( 85) 119 36.0 0.0082
NP_001257323 (OMIM: 606914) cAMP-dependent protein ( 85) 119 36.0 0.0082
NP_001257324 (OMIM: 606914) cAMP-dependent protein ( 85) 119 36.0 0.0082
>>NP_001268374 (OMIM: 604932) cAMP-dependent protein kin (76 aa)
initn: 493 init1: 493 opt: 493 Z-score: 660.3 bits: 126.2 E(85289): 4.9e-30
Smith-Waterman score: 493; 100.0% identity (100.0% similar) in 76 aa overlap (1-76:1-76)
10 20 30 40 50 60
pF1KE3 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
10 20 30 40 50 60
70
pF1KE3 KEAGNQPQSSDGTTSS
::::::::::::::::
NP_001 KEAGNQPQSSDGTTSS
70
>>NP_008997 (OMIM: 604932) cAMP-dependent protein kinase (76 aa)
initn: 493 init1: 493 opt: 493 Z-score: 660.3 bits: 126.2 E(85289): 4.9e-30
Smith-Waterman score: 493; 100.0% identity (100.0% similar) in 76 aa overlap (1-76:1-76)
10 20 30 40 50 60
pF1KE3 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
10 20 30 40 50 60
70
pF1KE3 KEAGNQPQSSDGTTSS
::::::::::::::::
NP_008 KEAGNQPQSSDGTTSS
70
>>NP_861520 (OMIM: 604932) cAMP-dependent protein kinase (76 aa)
initn: 493 init1: 493 opt: 493 Z-score: 660.3 bits: 126.2 E(85289): 4.9e-30
Smith-Waterman score: 493; 100.0% identity (100.0% similar) in 76 aa overlap (1-76:1-76)
10 20 30 40 50 60
pF1KE3 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_861 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
10 20 30 40 50 60
70
pF1KE3 KEAGNQPQSSDGTTSS
::::::::::::::::
NP_861 KEAGNQPQSSDGTTSS
70
>>XP_016883105 (OMIM: 604932) PREDICTED: cAMP-dependent (76 aa)
initn: 493 init1: 493 opt: 493 Z-score: 660.3 bits: 126.2 E(85289): 4.9e-30
Smith-Waterman score: 493; 100.0% identity (100.0% similar) in 76 aa overlap (1-76:1-76)
10 20 30 40 50 60
pF1KE3 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
10 20 30 40 50 60
70
pF1KE3 KEAGNQPQSSDGTTSS
::::::::::::::::
XP_016 KEAGNQPQSSDGTTSS
70
>>XP_016883104 (OMIM: 604932) PREDICTED: cAMP-dependent (76 aa)
initn: 493 init1: 493 opt: 493 Z-score: 660.3 bits: 126.2 E(85289): 4.9e-30
Smith-Waterman score: 493; 100.0% identity (100.0% similar) in 76 aa overlap (1-76:1-76)
10 20 30 40 50 60
pF1KE3 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
10 20 30 40 50 60
70
pF1KE3 KEAGNQPQSSDGTTSS
::::::::::::::::
XP_016 KEAGNQPQSSDGTTSS
70
>>XP_016883103 (OMIM: 604932) PREDICTED: cAMP-dependent (76 aa)
initn: 493 init1: 493 opt: 493 Z-score: 660.3 bits: 126.2 E(85289): 4.9e-30
Smith-Waterman score: 493; 100.0% identity (100.0% similar) in 76 aa overlap (1-76:1-76)
10 20 30 40 50 60
pF1KE3 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
10 20 30 40 50 60
70
pF1KE3 KEAGNQPQSSDGTTSS
::::::::::::::::
XP_016 KEAGNQPQSSDGTTSS
70
>>NP_861521 (OMIM: 604932) cAMP-dependent protein kinase (76 aa)
initn: 493 init1: 493 opt: 493 Z-score: 660.3 bits: 126.2 E(85289): 4.9e-30
Smith-Waterman score: 493; 100.0% identity (100.0% similar) in 76 aa overlap (1-76:1-76)
10 20 30 40 50 60
pF1KE3 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_861 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
10 20 30 40 50 60
70
pF1KE3 KEAGNQPQSSDGTTSS
::::::::::::::::
NP_861 KEAGNQPQSSDGTTSS
70
>>NP_001268373 (OMIM: 604932) cAMP-dependent protein kin (76 aa)
initn: 493 init1: 493 opt: 493 Z-score: 660.3 bits: 126.2 E(85289): 4.9e-30
Smith-Waterman score: 493; 100.0% identity (100.0% similar) in 76 aa overlap (1-76:1-76)
10 20 30 40 50 60
pF1KE3 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
10 20 30 40 50 60
70
pF1KE3 KEAGNQPQSSDGTTSS
::::::::::::::::
NP_001 KEAGNQPQSSDGTTSS
70
>>NP_862822 (OMIM: 606059) cAMP-dependent protein kinase (76 aa)
initn: 133 init1: 123 opt: 141 Z-score: 200.9 bits: 41.3 E(85289): 0.00019
Smith-Waterman score: 141; 32.9% identity (67.1% similar) in 76 aa overlap (1-76:1-76)
10 20 30 40 50 60
pF1KE3 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
: .::..:.:::. :::::::. :: .: . . .:: .. : .. .::. ... .
NP_862 MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGEEDAQRSS
10 20 30 40 50 60
70
pF1KE3 KEAGNQPQSSDGTTSS
: ... :. . . :
NP_862 TEQSGEAQGEAAKSES
70
>>XP_016869109 (OMIM: 606059) PREDICTED: cAMP-dependent (76 aa)
initn: 133 init1: 123 opt: 141 Z-score: 200.9 bits: 41.3 E(85289): 0.00019
Smith-Waterman score: 141; 32.9% identity (67.1% similar) in 76 aa overlap (1-76:1-76)
10 20 30 40 50 60
pF1KE3 MMEVESSYSDFISCDRTGRRNAVPDIQGDSEAVSVRKLAGDMGELALEGAEGQVEGSAPD
: .::..:.:::. :::::::. :: .: . . .:: .. : .. .::. ... .
XP_016 MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGEEDAQRSS
10 20 30 40 50 60
70
pF1KE3 KEAGNQPQSSDGTTSS
: ... :. . . :
XP_016 TEQSGEAQGEAAKSES
70
76 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 13:03:58 2016 done: Sun Nov 6 13:03:59 2016
Total Scan time: 4.200 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]