Result of FASTA (ccds) for
pFN21AE2781
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2781, 126 aa
1>>>pF1KE2781 126 - 126 aa - 126 aa
Library: human.CCDS.faa
18921897 residues in 33420 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1149+/-0.000692; mu= 12.9004+/- 0.042
mean_var=74.1199+/-14.346, 0's: 0 Z-trim(110.8): 26 B-trim: 286 in 1/51
Lambda= 0.148973
statistics sampled from 11983 (12008) to 11983 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.733), E-opt: 0.2 (0.359), width: 16
Scan time: 0.910
The best scores are: opt bits E(33420)
CCDS1574.1 H2BU1 gene_id:128312|Hs109|chr1 ( 126) 789 177.7 1.6e-45
CCDS4640.1 H2BC17 gene_id:8348|Hs109|chr6 ( 126) 771 173.9 2.4e-44
CCDS4601.1 H2BC9 gene_id:8345|Hs109|chr6 ( 126) 770 173.7 2.8e-44
CCDS4633.1 H2BC15 gene_id:8341|Hs109|chr6 ( 126) 768 173.2 3.8e-44
CCDS4575.1 H2BC3 gene_id:3018|Hs109|chr6 ( 126) 768 173.2 3.8e-44
CCDS4587.1 H2BC5 gene_id:3017|Hs109|chr6 ( 126) 765 172.6 5.9e-44
CCDS936.1 H2BC21 gene_id:8349|Hs109|chr1 ( 126) 765 172.6 5.9e-44
CCDS30846.1 H2BC18 gene_id:440689|Hs109|chr1 ( 126) 765 172.6 5.9e-44
CCDS53359.1 H2BC18 gene_id:440689|Hs109|chr1 ( 134) 765 172.6 6.2e-44
CCDS4592.1 H2BC7 gene_id:8343|Hs109|chr6 ( 126) 764 172.4 6.8e-44
CCDS4594.1 H2BC8 gene_id:8339|Hs109|chr6 ( 126) 764 172.4 6.8e-44
CCDS4588.1 H2BC6 gene_id:8344|Hs109|chr6 ( 126) 764 172.4 6.8e-44
CCDS4603.1 H2BC10 gene_id:8346|Hs109|chr6 ( 126) 764 172.4 6.8e-44
CCDS4584.1 H2BC4 gene_id:8347|Hs109|chr6 ( 126) 764 172.4 6.8e-44
CCDS4618.1 H2BC11 gene_id:8970|Hs109|chr6 ( 126) 761 171.7 1.1e-43
CCDS4621.1 H2BC12 gene_id:85236|Hs109|chr6 ( 126) 760 171.5 1.2e-43
CCDS4625.1 H2BC13 gene_id:8340|Hs109|chr6 ( 126) 755 170.4 2.6e-43
CCDS4629.1 H2BC14 gene_id:8342|Hs109|chr6 ( 126) 750 169.4 5.5e-43
CCDS4563.1 H2BC1 gene_id:255626|Hs109|chr6 ( 127) 667 151.5 1.3e-37
CCDS55468.1 H2BW2 gene_id:286436|Hs109|chrX ( 154) 319 76.8 4.9e-15
CCDS35362.1 H2BW1 gene_id:158983|Hs109|chrX ( 175) 296 71.9 1.7e-13
>>CCDS1574.1 H2BU1 gene_id:128312|Hs109|chr1 (126 aa)
initn: 789 init1: 789 opt: 789 Z-score: 930.7 bits: 177.7 E(33420): 1.6e-45
Smith-Waterman score: 789; 100.0% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE2 MPDPSKSAPAPKKGSKKAVTKAQKKDGKKRKRGRKESYSIYVYKVLKQVHPDTGISSKAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 MPDPSKSAPAPKKGSKKAVTKAQKKDGKKRKRGRKESYSIYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 GIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE2 KYTSSK
::::::
CCDS15 KYTSSK
>>CCDS4640.1 H2BC17 gene_id:8348|Hs109|chr6 (126 aa)
initn: 771 init1: 771 opt: 771 Z-score: 909.8 bits: 173.9 E(33420): 2.4e-44
Smith-Waterman score: 771; 96.8% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE2 MPDPSKSAPAPKKGSKKAVTKAQKKDGKKRKRGRKESYSIYVYKVLKQVHPDTGISSKAM
::::.:::::::::::::::::::::::::::.:::::::::::::::::::::::::::
CCDS46 MPDPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVT
:::::::::::::::.::::::::::::::::::.:::::::::::::::::::::::::
CCDS46 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE2 KYTSSK
::::::
CCDS46 KYTSSK
>>CCDS4601.1 H2BC9 gene_id:8345|Hs109|chr6 (126 aa)
initn: 770 init1: 770 opt: 770 Z-score: 908.6 bits: 173.7 E(33420): 2.8e-44
Smith-Waterman score: 770; 96.0% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE2 MPDPSKSAPAPKKGSKKAVTKAQKKDGKKRKRGRKESYSIYVYKVLKQVHPDTGISSKAM
::::.:::::::::::::::::::::::::::.::::::.::::::::::::::::::::
CCDS46 MPDPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVT
:::::::::::::::.::::::::::::::::::.:::::::::::::::::::::::::
CCDS46 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE2 KYTSSK
::::::
CCDS46 KYTSSK
>>CCDS4633.1 H2BC15 gene_id:8341|Hs109|chr6 (126 aa)
initn: 768 init1: 768 opt: 768 Z-score: 906.3 bits: 173.2 E(33420): 3.8e-44
Smith-Waterman score: 768; 96.0% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE2 MPDPSKSAPAPKKGSKKAVTKAQKKDGKKRKRGRKESYSIYVYKVLKQVHPDTGISSKAM
::.:::::::::::::::::::::::::::::.::::::.::::::::::::::::::::
CCDS46 MPEPSKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVT
:::::::::::::::.::::::::::::::::::.:::::::::::::::::::::::::
CCDS46 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE2 KYTSSK
::::::
CCDS46 KYTSSK
>>CCDS4575.1 H2BC3 gene_id:3018|Hs109|chr6 (126 aa)
initn: 768 init1: 768 opt: 768 Z-score: 906.3 bits: 173.2 E(33420): 3.8e-44
Smith-Waterman score: 768; 96.0% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE2 MPDPSKSAPAPKKGSKKAVTKAQKKDGKKRKRGRKESYSIYVYKVLKQVHPDTGISSKAM
::.:::::::::::::::.:::::::::::::.:::::::::::::::::::::::::::
CCDS45 MPEPSKSAPAPKKGSKKAITKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVT
:::::::::::::::.::::::::::::::::::.:::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE2 KYTSSK
::::::
CCDS45 KYTSSK
>>CCDS4587.1 H2BC5 gene_id:3017|Hs109|chr6 (126 aa)
initn: 765 init1: 765 opt: 765 Z-score: 902.8 bits: 172.6 E(33420): 5.9e-44
Smith-Waterman score: 765; 95.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE2 MPDPSKSAPAPKKGSKKAVTKAQKKDGKKRKRGRKESYSIYVYKVLKQVHPDTGISSKAM
::.:.:::::::::::::::::::::::::::.::::::.::::::::::::::::::::
CCDS45 MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVT
:::::::::::::::.::::::::::::::::::.:::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE2 KYTSSK
::::::
CCDS45 KYTSSK
>>CCDS936.1 H2BC21 gene_id:8349|Hs109|chr1 (126 aa)
initn: 765 init1: 765 opt: 765 Z-score: 902.8 bits: 172.6 E(33420): 5.9e-44
Smith-Waterman score: 765; 96.0% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE2 MPDPSKSAPAPKKGSKKAVTKAQKKDGKKRKRGRKESYSIYVYKVLKQVHPDTGISSKAM
::.:.:::::::::::::::::::::::::::.:::::::::::::::::::::::::::
CCDS93 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVT
:::::::::::::::.::::::::::::::::::.:::::::::::::::::::::::::
CCDS93 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE2 KYTSSK
::::::
CCDS93 KYTSSK
>>CCDS30846.1 H2BC18 gene_id:440689|Hs109|chr1 (126 aa)
initn: 765 init1: 765 opt: 765 Z-score: 902.8 bits: 172.6 E(33420): 5.9e-44
Smith-Waterman score: 765; 95.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE2 MPDPSKSAPAPKKGSKKAVTKAQKKDGKKRKRGRKESYSIYVYKVLKQVHPDTGISSKAM
::::.::::::::::::::::.::::::::::.::::::.::::::::::::::::::::
CCDS30 MPDPAKSAPAPKKGSKKAVTKVQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVT
:::::::::::::::.::::::::::::::::::.:::::::::::::::::::::::::
CCDS30 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE2 KYTSSK
::::::
CCDS30 KYTSSK
>>CCDS53359.1 H2BC18 gene_id:440689|Hs109|chr1 (134 aa)
initn: 765 init1: 765 opt: 765 Z-score: 902.5 bits: 172.6 E(33420): 6.2e-44
Smith-Waterman score: 765; 95.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE2 MPDPSKSAPAPKKGSKKAVTKAQKKDGKKRKRGRKESYSIYVYKVLKQVHPDTGISSKAM
::::.::::::::::::::::.::::::::::.::::::.::::::::::::::::::::
CCDS53 MPDPAKSAPAPKKGSKKAVTKVQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVT
:::::::::::::::.::::::::::::::::::.:::::::::::::::::::::::::
CCDS53 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE2 KYTSSK
::::::
CCDS53 KYTSSKLIGPILWK
130
>>CCDS4592.1 H2BC7 gene_id:8343|Hs109|chr6 (126 aa)
initn: 764 init1: 764 opt: 764 Z-score: 901.7 bits: 172.4 E(33420): 6.8e-44
Smith-Waterman score: 764; 95.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE2 MPDPSKSAPAPKKGSKKAVTKAQKKDGKKRKRGRKESYSIYVYKVLKQVHPDTGISSKAM
::.:.:::::::::::::::::::::::::::.::::::.::::::::::::::::::::
CCDS45 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVT
:::::::::::::::.::::::::::::::::::.:::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE2 KYTSSK
::::::
CCDS45 KYTSSK
126 residues in 1 query sequences
18921897 residues in 33420 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Feb 19 20:36:40 2021 done: Fri Feb 19 20:36:40 2021
Total Scan time: 0.910 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]