Result of FASTA (ccds) for
pFN21AE2723
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2723, 302 aa
1>>>pF1KE2723 302 - 302 aa - 302 aa
Library: human.CCDS.faa
18921897 residues in 33420 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0502+/-0.000832; mu= 16.3807+/- 0.050
mean_var=62.3368+/-12.525, 0's: 0 Z-trim(106.2): 81 B-trim: 0 in 0/50
Lambda= 0.162443
statistics sampled from 8886 (8970) to 8886 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.268), width: 16
Scan time: 1.180
The best scores are: opt bits E(33420)
CCDS146.1 DHRS3 gene_id:9249|Hs109|chr1 ( 302) 1979 472.4 1.9e-133
CCDS6167.1 SDR16C5 gene_id:195814|Hs109|chr8 ( 309) 644 159.5 2.9e-39
CCDS83296.1 SDR16C5 gene_id:195814|Hs109|chr8 ( 318) 617 153.2 2.4e-37
CCDS3618.1 HSD17B13 gene_id:345275|Hs109|chr4 ( 300) 597 148.5 5.9e-36
CCDS3619.1 HSD17B11 gene_id:51170|Hs109|chr4 ( 300) 597 148.5 5.9e-36
CCDS6213.1 RDH10 gene_id:157506|Hs109|chr8 ( 341) 556 138.9 5.1e-33
CCDS47097.1 HSD17B13 gene_id:345275|Hs109|chr4 ( 264) 365 94.1 1.2e-19
CCDS83295.1 SDR16C5 gene_id:195814|Hs109|chr8 ( 265) 315 82.4 4.2e-16
CCDS9743.1 DHRS7 gene_id:51635|Hs109|chr14 ( 339) 278 73.8 2.1e-13
CCDS81810.1 DHRS7 gene_id:51635|Hs109|chr14 ( 289) 276 73.3 2.5e-13
CCDS82092.1 DHRS7B gene_id:25979|Hs109|chr17 ( 310) 263 70.3 2.2e-12
CCDS11215.1 DHRS7B gene_id:25979|Hs109|chr17 ( 325) 263 70.3 2.3e-12
CCDS3812.1 CBR4 gene_id:84869|Hs109|chr4 ( 237) 259 69.2 3.4e-12
>>CCDS146.1 DHRS3 gene_id:9249|Hs109|chr1 (302 aa)
initn: 1979 init1: 1979 opt: 1979 Z-score: 2509.5 bits: 472.4 E(33420): 1.9e-133
Smith-Waterman score: 1979; 100.0% identity (100.0% similar) in 302 aa overlap (1-302:1-302)
10 20 30 40 50 60
pF1KE2 MVWKRLGALVMFPLQMIYLVVKAAVGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MVWKRLGALVMFPLQMIYLVVKAAVGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 RGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 RGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITIL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 VNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 AIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 AIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 LKPETVARRTVEAVQLNQALLLLPWTMHALVILKSILPQAALEEIHKFSGTYTCMNTFKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LKPETVARRTVEAVQLNQALLLLPWTMHALVILKSILPQAALEEIHKFSGTYTCMNTFKG
250 260 270 280 290 300
pF1KE2 RT
::
CCDS14 RT
>>CCDS6167.1 SDR16C5 gene_id:195814|Hs109|chr8 (309 aa)
initn: 635 init1: 440 opt: 644 Z-score: 818.5 bits: 159.5 E(33420): 2.9e-39
Smith-Waterman score: 644; 36.2% identity (67.2% similar) in 293 aa overlap (9-298:11-302)
10 20 30 40 50
pF1KE2 MVWKRLGALVMFPLQMIYLVVKAAVGLVLPAKLRDLSRENVLITGGGRGIGRQLAREF
: .: . .. ...: . .:: .... : :::::.: :.:: :: .:
CCDS61 MSFNLQSSKKLFIFLGKSLFSLLEAMIFALLPKPRKNVAGEIVLITGAGSGLGRLLALQF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 AERGARKIVLWGRTEKCLKETTEEIRQMG-TECHYFICDVGNREEVYQTAKAVREKVGDI
:. :. .::: ... .:: . :. : :. : . :: ...: ::..: :...:::.
CCDS61 ARLGSV-LVLWDINKEGNEETCKMAREAGATRVHAYTCDCSQKEGVYRVADQVKKEVGDV
70 80 90 100 110
120 130 140 150 160 170
pF1KE2 TILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVL
.::.:::..: ::...: :. . :: .: ...:: ::::: :. ..::.::..:
CCDS61 SILINNAGIVTGKKFLDCPDELMEKSFDVNFKAHLWTYKAFLPAMIANDHGHLVCISSSA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 ALSAIPGAIDYCTSKASAFAFMESLTLGLL--DCPGVSATTVLPFHTSTEMFQGMRVRFP
.::.. : :::.:: .::.: ::. . . :...: : :: .: ::.: . :
CCDS61 GLSGVNGLADYCASKFAAFGFAESVFVETFVQKQKGIKTTIVCPFFIKTGMFEGCTTGCP
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE2 NLFPPLKPETVARRTVEAVQLNQALLLLPWTMHALVILKSILPQAALEEIHKFSGTYTCM
.:.: :.:. .... :::. .. : .: .. ...:::.:: . : . : :
CCDS61 SLLPILEPKYAVEKIVEAILQEKMYLYMPKLLYFMMFLKSFLPLKTGLLIADYLGILHAM
240 250 260 270 280 290
300
pF1KE2 NTFKGRT
. :
CCDS61 DGFVDQKKKL
300
>>CCDS83296.1 SDR16C5 gene_id:195814|Hs109|chr8 (318 aa)
initn: 616 init1: 440 opt: 617 Z-score: 784.1 bits: 153.2 E(33420): 2.4e-37
Smith-Waterman score: 617; 36.5% identity (69.0% similar) in 271 aa overlap (9-276:11-280)
10 20 30 40 50
pF1KE2 MVWKRLGALVMFPLQMIYLVVKAAVGLVLPAKLRDLSRENVLITGGGRGIGRQLAREF
: .: . .. ...: . .:: .... : :::::.: :.:: :: .:
CCDS83 MSFNLQSSKKLFIFLGKSLFSLLEAMIFALLPKPRKNVAGEIVLITGAGSGLGRLLALQF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 AERGARKIVLWGRTEKCLKETTEEIRQMG-TECHYFICDVGNREEVYQTAKAVREKVGDI
:. :. .::: ... .:: . :. : :. : . :: ...: ::..: :...:::.
CCDS83 ARLGSV-LVLWDINKEGNEETCKMAREAGATRVHAYTCDCSQKEGVYRVADQVKKEVGDV
70 80 90 100 110
120 130 140 150 160 170
pF1KE2 TILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVL
.::.:::..: ::...: :. . :: .: ...:: ::::: :. ..::.::..:
CCDS83 SILINNAGIVTGKKFLDCPDELMEKSFDVNFKAHLWTYKAFLPAMIANDHGHLVCISSSA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 ALSAIPGAIDYCTSKASAFAFMESLTLGLL--DCPGVSATTVLPFHTSTEMFQGMRVRFP
.::.. : :::.:: .::.: ::. . . :...: : :: .: ::.: . :
CCDS83 GLSGVNGLADYCASKFAAFGFAESVFVETFVQKQKGIKTTIVCPFFIKTGMFEGCTTGCP
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE2 NLFPPLKPETVARRTVEAVQLNQALLLLPWTMHALVILKSILPQAALEEIHKFSGTYTCM
.:.: :.:. .... :::. .. : .: .. ...:: .
CCDS83 SLLPILEPKYAVEKIVEAILQEKMYLYMPKLLYFMMFLKRLHLAQDGSECLTEAMWDRAK
240 250 260 270 280 290
300
pF1KE2 NTFKGRT
CCDS83 DPGQAIRNSGLRSHYSLSL
300 310
>>CCDS3618.1 HSD17B13 gene_id:345275|Hs109|chr4 (300 aa)
initn: 514 init1: 403 opt: 597 Z-score: 759.2 bits: 148.5 E(33420): 5.9e-36
Smith-Waterman score: 597; 34.5% identity (70.9% similar) in 275 aa overlap (9-281:7-277)
10 20 30 40 50 60
pF1KE2 MVWKRLGALVMFPLQMIYLVVKAAVGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAE
.... . .:: ... : . .: . .... : :::::.:.::::: . :::.
CCDS36 MNIILEILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLITGAGHGIGRQTTYEFAK
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 RGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITIL
: . .::: ... ..::. : :..:. : .. : .::::.:.. . :...:::.::.
CCDS36 RQS-ILVLWDINKRGVEETAAECRKLGVTAHAYVVDCSNREEIYRSLNQVKKEVGDVTIV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 VNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALS
::::..:. .:... :. . :. ..: ::.:: :::.:: :.: ..:::: . :: .
CCDS36 VNNAGTVYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGHE
120 130 140 150 160 170
190 200 210 220 230
pF1KE2 AIPGAIDYCTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLF
.:: : ::.:: .: .: ..:: : : :.... . : ..: . .. .: :.
CCDS36 GIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTR---LW
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE2 PPLKPETVARRTVEAVQLNQALLLLPWTMHALVILKSILPQAALEEIHKFSGTYTCMNTF
: :. . :.: .... :. ....: .. .. :...::. :
CCDS36 PVLETDEVVRSLIDGILTNKKMIFVPSYINIFLRLQKFLPERASAILNRMQNIQFEAVVG
240 250 260 270 280 290
300
pF1KE2 KGRT
CCDS36 HKIKMK
300
>>CCDS3619.1 HSD17B11 gene_id:51170|Hs109|chr4 (300 aa)
initn: 464 init1: 393 opt: 597 Z-score: 759.2 bits: 148.5 E(33420): 5.9e-36
Smith-Waterman score: 597; 35.9% identity (70.4% similar) in 284 aa overlap (6-287:5-283)
10 20 30 40 50 60
pF1KE2 MVWKRLGALVMFPLQMIYLVVKAAVGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAE
: :...:: .: ... : : .: . .... : :::::.:.:::: : :::
CCDS36 MKFLLDILLLLPL-LIVCSLESFVKLFIPKRRKSVTGEIVLITGAGHGIGRLTAYEFA-
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 RGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITIL
. :.::: ... :.::. . . .:.. : :. : .:::..:..:: :. ..::..::
CCDS36 KLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSIL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 VNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALS
::::.::. ..:. ..: . :. ..:.:..::::::::: : . ..:::: . :. .
CCDS36 VNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV
120 130 140 150 160 170
190 200 210 220 230
pF1KE2 AIPGAIDYCTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLF
..: . ::.:: .: .: ..:: :. :. ::..: . : ..: .... . .:
CCDS36 SVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST---SLG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE2 PPLKPETVARRTVEAVQLNQALLLLPWTMHALVILKSILPQAALEEIHKFSGTYTCMNTF
: :.:: :. : .... .: ....: .. :. :. :::. : ...
CCDS36 PTLEPEEVVNRLMHGILTEQKMIFIPSSIAFLTTLERILPERFLAVLKRKISVKFDAVIG
240 250 260 270 280 290
300
pF1KE2 KGRT
CCDS36 YKMKAQ
300
>>CCDS6213.1 RDH10 gene_id:157506|Hs109|chr8 (341 aa)
initn: 575 init1: 366 opt: 556 Z-score: 706.4 bits: 138.9 E(33420): 5.1e-33
Smith-Waterman score: 628; 37.2% identity (65.4% similar) in 309 aa overlap (19-298:18-324)
10 20 30 40 50 60
pF1KE2 MVWKRLGALVMFPLQMIYLVVKAAVGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAE
.:. :: :: : : .... . ::::.: :.:: .: :::.
CCDS62 MNIVVEFFVVTFKVLWAFVLAAARWLVRP-KEKSVAGQVCLITGAGSGLGRLFALEFAR
10 20 30 40 50
70 80 90
pF1KE2 RGARKIVLWGRTEKCLKETTEEIRQM----------------GTE-----CHY----FIC
: : .::: . . .::. .:.. : : :. . :
CCDS62 RRAL-LVLWDINTQSNEETAGMVRHIYRDLEAADAAALQAGNGEEEILPHCNLQVFTYTC
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE2 DVGNREEVYQTAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTT
:::.::.:: ::. ::..::....:::::.:: :. :.. :. . ... .: ..::::
CCDS62 DVGKRENVYLTAERVRKEVGEVSVLVNNAGVVSGHHLLECPDELIERTMMVNCHAHFWTT
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE2 KAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLT--LGLLDCPGVS
::::: :::...:::: . : :.: . :. :::.:: .. .: :::. : . :..
CCDS62 KAFLPTMLEINHGHIVTVASSLGLFSTAGVEDYCASKFGVVGFHESLSHELKAAEKDGIK
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE2 ATTVLPFHTSTEMFQGMRVR--FPNLFPPLKPETVARRTVEAVQLNQALLLLPWTMHALV
.: : :. ..: ::.: :.: . ..:::::. ......:. .: .. : :. ..
CCDS62 TTLVCPYLVDTGMFRGCRIRKEIEPFLPPLKPDYCVKQAMKAILTDQPMICTPRLMYIVT
240 250 260 270 280 290
280 290 300
pF1KE2 ILKSILPQAALEEIHKFSGTYTCMNTFKGRT
..::::: :. ...: :. :: :
CCDS62 FMKSILPFEAVVCMYRFLGADKCMYPFIAQRKQATNNNEAKNGI
300 310 320 330 340
>>CCDS47097.1 HSD17B13 gene_id:345275|Hs109|chr4 (264 aa)
initn: 403 init1: 286 opt: 365 Z-score: 466.1 bits: 94.1 E(33420): 1.2e-19
Smith-Waterman score: 427; 30.5% identity (62.2% similar) in 275 aa overlap (9-281:7-241)
10 20 30 40 50 60
pF1KE2 MVWKRLGALVMFPLQMIYLVVKAAVGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAE
.... . .:: ... : . .: . .... : :::::.:.::::: . :::.
CCDS47 MNIILEILLLLITIIYSYLESLVKFFIPQRRKSVAGEIVLITGAGHGIGRQTTYEFAK
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 RGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQTAKAVREKVGDITIL
: . .::: :... :...:::.::.
CCDS47 RQS-ILVLW--------------------------DINK----------VKKEVGDVTIV
60 70 80
130 140 150 160 170 180
pF1KE2 VNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALS
::::..:. .:... :. . :. ..: ::.:: :::.:: :.: ..:::: . :: .
CCDS47 VNNAGTVYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMMERNHGHIVTVASVCGHE
90 100 110 120 130 140
190 200 210 220 230
pF1KE2 AIPGAIDYCTSKASAFAFMESLT--LGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLF
.:: : ::.:: .: .: ..:: : : :.... . : ..: . .. .: :.
CCDS47 GIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIKTSCLCPVFVNTGFTKNPSTR---LW
150 160 170 180 190
240 250 260 270 280 290
pF1KE2 PPLKPETVARRTVEAVQLNQALLLLPWTMHALVILKSILPQAALEEIHKFSGTYTCMNTF
: :. . :.: .... :. ....: .. .. :...::. :
CCDS47 PVLETDEVVRSLIDGILTNKKMIFVPSYINIFLRLQKFLPERASAILNRMQNIQFEAVVG
200 210 220 230 240 250
300
pF1KE2 KGRT
CCDS47 HKIKMK
260
>>CCDS83295.1 SDR16C5 gene_id:195814|Hs109|chr8 (265 aa)
initn: 482 init1: 166 opt: 315 Z-score: 402.8 bits: 82.4 E(33420): 4.2e-16
Smith-Waterman score: 409; 30.4% identity (55.6% similar) in 293 aa overlap (9-298:11-258)
10 20 30 40 50
pF1KE2 MVWKRLGALVMFPLQMIYLVVKAAVGLVLPAKLRDLSRENVLITGGGRGIGRQLAREF
: .: . .. ...: . .:: .... : :::::.: :.:: :: .:
CCDS83 MSFNLQSSKKLFIFLGKSLFSLLEAMIFALLPKPRKNVAGEIVLITGAGSGLGRLLALQF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 AERGARKIVLWGRTEKCLKETTEEIRQMG-TECHYFICDVGNREEVYQTAKAVREKVGDI
:. :. .::: ... .:: . :. : :. : . :: ...: :: .:.:
CCDS83 ARLGSV-LVLWDINKEGNEETCKMAREAGATRVHAYTCDCSQKEGVY--------RVAD-
70 80 90 100 110
120 130 140 150 160 170
pF1KE2 TILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVL
: ::::: :. ..::.::..:
CCDS83 -----------------------------------QTYKAFLPAMIANDHGHLVCISSSA
120 130
180 190 200 210 220 230
pF1KE2 ALSAIPGAIDYCTSKASAFAFMESLTLGLL--DCPGVSATTVLPFHTSTEMFQGMRVRFP
.::.. : :::.:: .::.: ::. . . :...: : :: .: ::.: . :
CCDS83 GLSGVNGLADYCASKFAAFGFAESVFVETFVQKQKGIKTTIVCPFFIKTGMFEGCTTGCP
140 150 160 170 180 190
240 250 260 270 280 290
pF1KE2 NLFPPLKPETVARRTVEAVQLNQALLLLPWTMHALVILKSILPQAALEEIHKFSGTYTCM
.:.: :.:. .... :::. .. : .: .. ...:::.:: . : . : :
CCDS83 SLLPILEPKYAVEKIVEAILQEKMYLYMPKLLYFMMFLKSFLPLKTGLLIADYLGILHAM
200 210 220 230 240 250
300
pF1KE2 NTFKGRT
. :
CCDS83 DGFVDQKKKL
260
>>CCDS9743.1 DHRS7 gene_id:51635|Hs109|chr14 (339 aa)
initn: 275 init1: 234 opt: 278 Z-score: 354.3 bits: 73.8 E(33420): 2.1e-13
Smith-Waterman score: 278; 31.2% identity (65.1% similar) in 192 aa overlap (35-219:47-234)
10 20 30 40 50 60
pF1KE2 RLGALVMFPLQMIYLVVKAAVGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGAR
.:. : .::.. :::..:: .... :.
CCDS97 LLLVQLLRFLRADGDLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEELAYQLSKLGV-
20 30 40 50 60 70
70 80 90 100 110
pF1KE2 KIVLWGRTEKCLKETTEEIRQMGT--ECHYFI-----CDVGNREEVYQTAKAVREKVGDI
..:: .: . :... .. . :. : .. :.:..: . .::: .. : :
CCDS97 SLVLSARRVHELERVKRRCLENGNLKEKDILVLPLDLTDTGSHEAA---TKAVLQEFGRI
80 90 100 110 120 130
120 130 140 150 160 170
pF1KE2 TILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVL
:::::... . . ::.. :. : ..: :: :: ::.:.: ..:.:: .::.:
CCDS97 DILVNNGGMSQRSLCMDTSLDVYRKLIELNYLGTVSLTKCVLPHMIERKQGKIVTVNSIL
140 150 160 170 180 190
180 190 200 210 220 230
pF1KE2 ALSAIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNL
.. ..: .: ::.:: . .:...: : ::. .... :
CCDS97 GIISVPLSIGYCASKHALRGFFNGLRTELATYPGIIVSNICPGPVQSNIVENSLAGEVTK
200 210 220 230 240 250
240 250 260 270 280 290
pF1KE2 FPPLKPETVARRTVEAVQLNQALLLLPWTMHALVILKSILPQAALEEIHKFSGTYTCMNT
CCDS97 TIGNNGDQSHKMTTSRCVRLMLISMANDLKEVWISEQPFLLVTYLWQYMPTWAWWITNKM
260 270 280 290 300 310
>>CCDS81810.1 DHRS7 gene_id:51635|Hs109|chr14 (289 aa)
initn: 275 init1: 234 opt: 276 Z-score: 352.8 bits: 73.3 E(33420): 2.5e-13
Smith-Waterman score: 276; 31.7% identity (65.6% similar) in 186 aa overlap (41-219:3-184)
20 30 40 50 60 70
pF1KE2 MFPLQMIYLVVKAAVGLVLPAKLRDLSRENVLITGGGRGIGRQLAREFAERGARKIVLWG
: .::.. :::..:: .... :. ..:: .
CCDS81 MVVWVTGASSGIGEELAYQLSKLGV-SLVLSA
10 20 30
80 90 100 110 120
pF1KE2 RTEKCLKETTEEIRQMGT--ECHYFI-----CDVGNREEVYQTAKAVREKVGDITILVNN
: . :... .. . :. : .. :.:..: . .::: .. : : :::::
CCDS81 RRVHELERVKRRCLENGNLKEKDILVLPLDLTDTGSHEAA---TKAVLQEFGRIDILVNN
40 50 60 70 80
130 140 150 160 170 180
pF1KE2 AAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIP
... . . ::.. :. : ..: :: :: ::.:.: ..:.:: .::.:.. ..:
CCDS81 GGMSQRSLCMDTSLDVYRKLIELNYLGTVSLTKCVLPHMIERKQGKIVTVNSILGIISVP
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE2 GAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKP
.: ::.:: . .:...: : ::. .... :
CCDS81 LSIGYCASKHALRGFFNGLRTELATYPGIIVSNICPGPVQSNIVENSLAGEVTKTIGNNG
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE2 ETVARRTVEAVQLNQALLLLPWTMHALVILKSILPQAALEEIHKFSGTYTCMNTFKGRT
CCDS81 DQSHKMTTSRCVRLMLISMANDLKEVWISEQPFLLVTYLWQYMPTWAWWITNKMGKKRIE
210 220 230 240 250 260
302 residues in 1 query sequences
18921897 residues in 33420 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Jul 7 15:57:33 2018 done: Sat Jul 7 15:57:33 2018
Total Scan time: 1.180 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]