FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2687, 579 aa
  1>>>pF1KE2687     579 - 579 aa - 579 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8579+/-0.000894; mu= 17.0691+/- 0.054
 mean_var=94.1367+/-18.993, 0's: 0 Z-trim(108.5): 13  B-trim: 0 in 0/50
 Lambda= 0.132189
 statistics sampled from 10254 (10259) to 10254 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.686), E-opt: 0.2 (0.315), width:  16
 Scan time:  2.900

The best scores are:                                      opt bits E(32554)
CCDS535.1 FAAH gene_id:2166|Hs108|chr1             ( 579) 3898 753.9 1.3e-217
CCDS14375.1 FAAH2 gene_id:158584|Hs108|chrX        ( 532)  383 83.5 7.3e-16


>>CCDS535.1 FAAH gene_id:2166|Hs108|chr1                  (579 aa)
 initn: 3898 init1: 3898 opt: 3898  Z-score: 4020.6  bits: 753.9 E(32554): 1.3e-217
Smith-Waterman score: 3898; 99.8% identity (99.8% similar) in 579 aa overlap (1-579:1-579)

               10        20        30        40        50        60
pF1KE2 MVQYELWAALPGASGVALACCFVAAAVALRWSGRRTARGAVVRARQRQRAGLENMDRAAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MVQYELWAALPGASGVALACCFVAAAVALRWSGRRTARGAVVRARQRQRAGLENMDRAAQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 RFRLQNPDLDSEALLALPLPQLVQKLHSRELAPEAVLFTYVGKAWEVNKGTNCVTSYLAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 RFRLQNPDLDSEALLALPLPQLVQKLHSRELAPEAVLFTYVGKAWEVNKGTNCVTSYLAD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 CETQLSQATRQGLLYGVPVSLKECFTYKGQDSTLGLSLNEGVPAECDSVVVHVLKLQGAV
       :::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 CETQLSQAPRQGLLYGVPVSLKECFTYKGQDSTLGLSLNEGVPAECDSVVVHVLKLQGAV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 PFVHTNVPQSMFSYDCSNPLFGQTVNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 PFVHTNVPQSMFSYDCSNPLFGQTVNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 SIRFPSSFCGICGLKPTGNRLSKSGLKGCVYGQEAVRLSVGPMARDVESLALCLRALLCE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 SIRFPSSFCGICGLKPTGNRLSKSGLKGCVYGQEAVRLSVGPMARDVESLALCLRALLCE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 DMFRLDPTVPPLPFREEVYTSSQPLRVGYYETDNYTMPSPAMRRAVLETKQSLEAAGHTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 DMFRLDPTVPPLPFREEVYTSSQPLRVGYYETDNYTMPSPAMRRAVLETKQSLEAAGHTL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE2 VPFLPSNIPHALETLSTGGLFSDGGHTFLQNFKGDFVDPCLGDLVSILKLPQWLKGLLAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VPFLPSNIPHALETLSTGGLFSDGGHTFLQNFKGDFVDPCLGDLVSILKLPQWLKGLLAF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE2 LVKPLLPRLSAFLSNMKSRSAGKLWELQHEIEVYRKTVIAQWRALDLDVVLTPMLAPALD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LVKPLLPRLSAFLSNMKSRSAGKLWELQHEIEVYRKTVIAQWRALDLDVVLTPMLAPALD
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE2 LNAPGRATGAVSYTMLYNCLDFPAGVVPVTTVTAEDEAQMEHYRGYFGDIWDKMLQKGMK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LNAPGRATGAVSYTMLYNCLDFPAGVVPVTTVTAEDEAQMEHYRGYFGDIWDKMLQKGMK
              490       500       510       520       530       540

              550       560       570         
pF1KE2 KSVGLPVAVQCVALPWQEELCLRFMREVERLMTPEKQSS
       :::::::::::::::::::::::::::::::::::::::
CCDS53 KSVGLPVAVQCVALPWQEELCLRFMREVERLMTPEKQSS
              550       560       570         

>>CCDS14375.1 FAAH2 gene_id:158584|Hs108|chrX             (532 aa)
 initn: 423 init1: 375 opt: 383  Z-score: 398.3  bits: 83.5 E(32554): 7.3e-16
Smith-Waterman score: 446; 26.3% identity (53.7% similar) in 514 aa overlap (61-544:35-524)

               40        50        60        70        80        90
pF1KE2 WSGRRTARGAVVRARQRQRAGLENMDRAAQRFRLQNPDLDSEALLALPLPQLVQKLHSRE
                                     .:  ..:   .: :: :   ::.. ...:.
CCDS14 FTARIQLFLLRALGFLIGLVGRAALVLGGPKFASKTPRPVTEPLLLLSGMQLAKLIRQRK
           10        20        30        40        50        60    

              100       110       120       130                    
pF1KE2 LAPEAVLFTYVGKAWEVNKGTNCVTSYLADCETQLSQATRQGL---------------LY
       .    :. .:...  .::   : ...:  .   . ..:. : :               . 
CCDS14 VKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMKEAHAVDQKLAEKQEDEATLENKWPFL
           70        80        90       100       110       120    

         140       150       160       170       180       190     
pF1KE2 GVPVSLKECFTYKGQDSTLGLSLNEGVPAECDSVVVHVLKLQGAVPFVHTNVPQSMFSYD
       :::...:: :  .:. .. ::   . . :. :..:: .::  ::.:.  ::  .  . :.
CCDS14 GVPLTVKEAFQLQGMPNSSGLMNRRDAIAKTDATVVALLKGAGAIPLGITNCSELCMWYE
          130       140       150       160       170       180    

         200       210       220       230       240       250     
pF1KE2 CSNPLFGQTVNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSSFCGICGLK
        :: ..:.. ::.  ..  ::::::::  .... : .:.:.:::::::.:. : :: : :
CCDS14 SSNKIYGRSNNPYDLQHIVGGSSGGEGCTLAAACSVIGVGSDIGGSIRMPAFFNGIFGHK
          190       200       210       220       230       240    

         260       270       280       290       300       310     
pF1KE2 PTGNRLSKSGLKGCVYGQEAVRLSVGPMARDVESLALCLRALLCEDMFRLDPTVPPLPFR
       :. . . ..:    . : . . : .::: : .:.::  :...         : .  : . 
CCDS14 PSPGVVPNKGQFPLAVGAQELFLCTGPMCRYAEDLAPMLKVMA-------GPGIKRLKLD
          250       260       270       280              290       

         320       330       340       350       360       370     
pF1KE2 EEVYTSSQPLRVGYYETDNYTMPSPAMRRAVLETKQSLEAAGHTLVPFLPSNIPHA-LET
        .:.   . :.  ..: :. ..    . . .. :.... .  : :  .: ... :. :. 
CCDS14 TKVHL--KDLKFYWMEHDGGSFLMSKVDQDLIMTQKKVVV--H-LETILGASVQHVKLKK
       300         310       320       330          340       350  

               380       390       400           410       420     
pF1KE2 LSTG-----GLFSDGGHTFLQNFKGDFVDPCLGDL---VSIL-KLPQWLKGLLAFLVKPL
       .. .     ...:  ::   .  :  :::  :::    :: : .: .:  :: .. .   
CCDS14 MKYSFQLWIAMMSAKGHDGKEPVK--FVD-LLGDHGKHVSPLWELIKWCLGLSVYTI---
            360       370          380       390       400         

         430        440       450       460       470           480
pF1KE2 LPRLSAFLSNMKSR-SAGKLWELQHEIEVYRKTVIAQWRALDLDVVLT----PMLAPALD
        : ..  : . : : :  :  ...   :  :: .. .   :  : :.     : .::   
CCDS14 -PSIGLALLEEKLRYSNEKYQKFKAVEESLRKELVDM---LGDDGVFLYPSHPTVAPK--
         410       420       430       440          450       460  

              490       500       510       520       530       540
pF1KE2 LNAPGRATGAVSYTMLYNCLDFPAGVVPVTTVTAEDEAQMEHYRGYFGDIWDKMLQKGMK
        ..:       .:: ... : .:.   :.   .      ..   : :.:     . . ..
CCDS14 HHVPLTRPFNFAYTGVFSALGLPVTQCPLGLNAKGLPLGIQVVAGPFNDHLTLAVAQYLE
              470       480       490       500       510       520

              550       560       570         
pF1KE2 KSVGLPVAVQCVALPWQEELCLRFMREVERLMTPEKQSS
       :. :                                   
CCDS14 KTFGGWVCPGKF                           
              530                             




579 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon May 22 10:35:02 2017 done: Mon May 22 10:35:03 2017
 Total Scan time:  2.900 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]