Result of FASTA (ccds) for
pFN21AE2683
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2683, 1023 aa
1>>>pF1KE2683 1023 - 1023 aa - 1023 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.9263+/-0.000855; mu= 3.1787+/- 0.052
mean_var=279.7542+/-55.234, 0's: 0 Z-trim(116.9): 16 B-trim: 0 in 0/54
Lambda= 0.076681
statistics sampled from 17569 (17584) to 17569 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.807), E-opt: 0.2 (0.54), width: 16
Scan time: 5.970
The best scores are: opt bits E(32554)
CCDS4298.1 PPARGC1B gene_id:133522|Hs108|chr5 (1023) 7071 796.0 0
CCDS54934.1 PPARGC1B gene_id:133522|Hs108|chr5 ( 959) 5768 651.8 1.9e-186
CCDS54933.1 PPARGC1B gene_id:133522|Hs108|chr5 ( 984) 5768 651.8 2e-186
CCDS73186.1 PPRC1 gene_id:23082|Hs108|chr10 (1400) 522 71.6 1.3e-11
>>CCDS4298.1 PPARGC1B gene_id:133522|Hs108|chr5 (1023 aa)
initn: 7071 init1: 7071 opt: 7071 Z-score: 4239.4 bits: 796.0 E(32554): 0
Smith-Waterman score: 7071; 100.0% identity (100.0% similar) in 1023 aa overlap (1-1023:1-1023)
10 20 30 40 50 60
pF1KE2 MAGNDCGALLDEELSSFFLNYLADTQGGGSGEEQLYADFPELDLSQLDASDFDSATCFGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MAGNDCGALLDEELSSFFLNYLADTQGGGSGEEQLYADFPELDLSQLDASDFDSATCFGE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 LQWCPENSETEPNQYSPDDSELFQIDSENEALLAELTKTLDDIPEDDVGLAAFPALDGGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LQWCPENSETEPNQYSPDDSELFQIDSENEALLAELTKTLDDIPEDDVGLAAFPALDGGD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ALSCTSASPAPSSAPPSPAPEKPSAPAPEVDELSLLQKLLLATSYPTSSSDTQKEGTAWR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ALSCTSASPAPSSAPPSPAPEKPSAPAPEVDELSLLQKLLLATSYPTSSSDTQKEGTAWR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 QAGLRSKSQRPCVKADSTQDKKAPMMQSQSRSCTELHKHLTSAQCCLQDRGLQPPCLQSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QAGLRSKSQRPCVKADSTQDKKAPMMQSQSRSCTELHKHLTSAQCCLQDRGLQPPCLQSP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 RLPAKEDKEPGEDCPSPQPAPASPRDSLALGRADPGAPVSQEDMQAMVQLIRYMHTYCLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RLPAKEDKEPGEDCPSPQPAPASPRDSLALGRADPGAPVSQEDMQAMVQLIRYMHTYCLP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 QRKLPPQTPEPLPKACSNPSQQVRSRPWSRHHSKASWAEFSILRELLAQDVLCDVSKPYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QRKLPPQTPEPLPKACSNPSQQVRSRPWSRHHSKASWAEFSILRELLAQDVLCDVSKPYR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 LATPVYASLTPRSRPRPPKDSQASPGRPSSVEEVRIAASPKSTGPRPSLRPLRLEVKREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LATPVYASLTPRSRPRPPKDSQASPGRPSSVEEVRIAASPKSTGPRPSLRPLRLEVKREV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 RRPARLQQQEEEDEEEEEEEEEEEKEEEEEWGRKRPGRGLPWTKLGRKLESSVCPVRRSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RRPARLQQQEEEDEEEEEEEEEEEKEEEEEWGRKRPGRGLPWTKLGRKLESSVCPVRRSR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 RLNPELGPWLTFADEPLVPSEPQGALPSLCLAPKAYDVERELGSPTDEDSGQDQQLLRGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RLNPELGPWLTFADEPLVPSEPQGALPSLCLAPKAYDVERELGSPTDEDSGQDQQLLRGP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 QIPALESPCESGCGDMDEDPSCPQLPPRDSPRCLMLALSQSDPTFGKKSFEQTLTVELCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QIPALESPCESGCGDMDEDPSCPQLPPRDSPRCLMLALSQSDPTFGKKSFEQTLTVELCG
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 TAGLTPPTTPPYKPTEEDPFKPDIKHSLGKEIALSLPSPEGLSLKATPGAAHKLPKKHPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TAGLTPPTTPPYKPTEEDPFKPDIKHSLGKEIALSLPSPEGLSLKATPGAAHKLPKKHPE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 RSELLSHLRHATAQPASQAGQKRPFSCSFGDHDYCQVLRPEGVLQRKVLRSWEPSGVHLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RSELLSHLRHATAQPASQAGQKRPFSCSFGDHDYCQVLRPEGVLQRKVLRSWEPSGVHLE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE2 DWPQQGAPWAEAQAPGREEDRSCDAGAPPKDSTLLRDHEIRASLTKHFGLLETALEEEDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 DWPQQGAPWAEAQAPGREEDRSCDAGAPPKDSTLLRDHEIRASLTKHFGLLETALEEEDL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE2 ASCKSPEYDTVFEDSSSSSGESSFLPEEEEEEGEEEEEDDEEEDSGVSPTCSDHCPYQSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ASCKSPEYDTVFEDSSSSSGESSFLPEEEEEEGEEEEEDDEEEDSGVSPTCSDHCPYQSP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE2 PSKANRQLCSRSRSSSGSSPCHSWSPATRRNFRCESRGPCSDRTPSIRHARKRREKAIGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PSKANRQLCSRSRSSSGSSPCHSWSPATRRNFRCESRGPCSDRTPSIRHARKRREKAIGE
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE2 GRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYGFITYRCSEHAALSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYGFITYRCSEHAALSLTK
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE2 GAALRKRNEPSFQLSYGGLRHFCWPRYTDYDSNSEEALPASGKSKYEAMDFDSLLKEAQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GAALRKRNEPSFQLSYGGLRHFCWPRYTDYDSNSEEALPASGKSKYEAMDFDSLLKEAQQ
970 980 990 1000 1010 1020
pF1KE2 SLH
:::
CCDS42 SLH
>>CCDS54934.1 PPARGC1B gene_id:133522|Hs108|chr5 (959 aa)
initn: 6631 init1: 5768 opt: 5768 Z-score: 3460.7 bits: 651.8 E(32554): 1.9e-186
Smith-Waterman score: 6557; 96.1% identity (96.1% similar) in 997 aa overlap (27-1023:2-959)
10 20 30 40 50 60
pF1KE2 MAGNDCGALLDEELSSFFLNYLADTQGGGSGEEQLYADFPELDLSQLDASDFDSATCFGE
::::::::::::::::::::::::::::::::::
CCDS54 MGGGSGEEQLYADFPELDLSQLDASDFDSATCFGE
10 20 30
70 80 90 100 110 120
pF1KE2 LQWCPENSETEPNQYSPDDSELFQIDSENEALLAELTKTLDDIPEDDVGLAAFPALDGGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LQWCPENSETEPNQYSPDDSELFQIDSENEALLAELTKTLDDIPEDDVGLAAFPALDGGD
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE2 ALSCTSASPAPSSAPPSPAPEKPSAPAPEVDELSLLQKLLLATSYPTSSSDTQKEGTAWR
:::::::::::::::::::::::::::::::::::
CCDS54 ALSCTSASPAPSSAPPSPAPEKPSAPAPEVDELSL-------------------------
100 110 120 130
190 200 210 220 230 240
pF1KE2 QAGLRSKSQRPCVKADSTQDKKAPMMQSQSRSCTELHKHLTSAQCCLQDRGLQPPCLQSP
::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 --------------ADSTQDKKAPMMQSQSRSCTELHKHLTSAQCCLQDRGLQPPCLQSP
140 150 160 170
250 260 270 280 290 300
pF1KE2 RLPAKEDKEPGEDCPSPQPAPASPRDSLALGRADPGAPVSQEDMQAMVQLIRYMHTYCLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RLPAKEDKEPGEDCPSPQPAPASPRDSLALGRADPGAPVSQEDMQAMVQLIRYMHTYCLP
180 190 200 210 220 230
310 320 330 340 350 360
pF1KE2 QRKLPPQTPEPLPKACSNPSQQVRSRPWSRHHSKASWAEFSILRELLAQDVLCDVSKPYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QRKLPPQTPEPLPKACSNPSQQVRSRPWSRHHSKASWAEFSILRELLAQDVLCDVSKPYR
240 250 260 270 280 290
370 380 390 400 410 420
pF1KE2 LATPVYASLTPRSRPRPPKDSQASPGRPSSVEEVRIAASPKSTGPRPSLRPLRLEVKREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LATPVYASLTPRSRPRPPKDSQASPGRPSSVEEVRIAASPKSTGPRPSLRPLRLEVKREV
300 310 320 330 340 350
430 440 450 460 470 480
pF1KE2 RRPARLQQQEEEDEEEEEEEEEEEKEEEEEWGRKRPGRGLPWTKLGRKLESSVCPVRRSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RRPARLQQQEEEDEEEEEEEEEEEKEEEEEWGRKRPGRGLPWTKLGRKLESSVCPVRRSR
360 370 380 390 400 410
490 500 510 520 530 540
pF1KE2 RLNPELGPWLTFADEPLVPSEPQGALPSLCLAPKAYDVERELGSPTDEDSGQDQQLLRGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RLNPELGPWLTFADEPLVPSEPQGALPSLCLAPKAYDVERELGSPTDEDSGQDQQLLRGP
420 430 440 450 460 470
550 560 570 580 590 600
pF1KE2 QIPALESPCESGCGDMDEDPSCPQLPPRDSPRCLMLALSQSDPTFGKKSFEQTLTVELCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QIPALESPCESGCGDMDEDPSCPQLPPRDSPRCLMLALSQSDPTFGKKSFEQTLTVELCG
480 490 500 510 520 530
610 620 630 640 650 660
pF1KE2 TAGLTPPTTPPYKPTEEDPFKPDIKHSLGKEIALSLPSPEGLSLKATPGAAHKLPKKHPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TAGLTPPTTPPYKPTEEDPFKPDIKHSLGKEIALSLPSPEGLSLKATPGAAHKLPKKHPE
540 550 560 570 580 590
670 680 690 700 710 720
pF1KE2 RSELLSHLRHATAQPASQAGQKRPFSCSFGDHDYCQVLRPEGVLQRKVLRSWEPSGVHLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RSELLSHLRHATAQPASQAGQKRPFSCSFGDHDYCQVLRPEGVLQRKVLRSWEPSGVHLE
600 610 620 630 640 650
730 740 750 760 770 780
pF1KE2 DWPQQGAPWAEAQAPGREEDRSCDAGAPPKDSTLLRDHEIRASLTKHFGLLETALEEEDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DWPQQGAPWAEAQAPGREEDRSCDAGAPPKDSTLLRDHEIRASLTKHFGLLETALEEEDL
660 670 680 690 700 710
790 800 810 820 830 840
pF1KE2 ASCKSPEYDTVFEDSSSSSGESSFLPEEEEEEGEEEEEDDEEEDSGVSPTCSDHCPYQSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ASCKSPEYDTVFEDSSSSSGESSFLPEEEEEEGEEEEEDDEEEDSGVSPTCSDHCPYQSP
720 730 740 750 760 770
850 860 870 880 890 900
pF1KE2 PSKANRQLCSRSRSSSGSSPCHSWSPATRRNFRCESRGPCSDRTPSIRHARKRREKAIGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PSKANRQLCSRSRSSSGSSPCHSWSPATRRNFRCESRGPCSDRTPSIRHARKRREKAIGE
780 790 800 810 820 830
910 920 930 940 950 960
pF1KE2 GRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYGFITYRCSEHAALSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYGFITYRCSEHAALSLTK
840 850 860 870 880 890
970 980 990 1000 1010 1020
pF1KE2 GAALRKRNEPSFQLSYGGLRHFCWPRYTDYDSNSEEALPASGKSKYEAMDFDSLLKEAQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GAALRKRNEPSFQLSYGGLRHFCWPRYTDYDSNSEEALPASGKSKYEAMDFDSLLKEAQQ
900 910 920 930 940 950
pF1KE2 SLH
:::
CCDS54 SLH
>>CCDS54933.1 PPARGC1B gene_id:133522|Hs108|chr5 (984 aa)
initn: 6803 init1: 5768 opt: 5768 Z-score: 3460.6 bits: 651.8 E(32554): 2e-186
Smith-Waterman score: 6729; 96.2% identity (96.2% similar) in 1023 aa overlap (1-1023:1-984)
10 20 30 40 50 60
pF1KE2 MAGNDCGALLDEELSSFFLNYLADTQGGGSGEEQLYADFPELDLSQLDASDFDSATCFGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MAGNDCGALLDEELSSFFLNYLADTQGGGSGEEQLYADFPELDLSQLDASDFDSATCFGE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 LQWCPENSETEPNQYSPDDSELFQIDSENEALLAELTKTLDDIPEDDVGLAAFPALDGGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LQWCPENSETEPNQYSPDDSELFQIDSENEALLAELTKTLDDIPEDDVGLAAFPALDGGD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ALSCTSASPAPSSAPPSPAPEKPSAPAPEVDELSLLQKLLLATSYPTSSSDTQKEGTAWR
:::::::::::::::::::::::::::::::::::
CCDS54 ALSCTSASPAPSSAPPSPAPEKPSAPAPEVDELSL-------------------------
130 140 150
190 200 210 220 230 240
pF1KE2 QAGLRSKSQRPCVKADSTQDKKAPMMQSQSRSCTELHKHLTSAQCCLQDRGLQPPCLQSP
::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 --------------ADSTQDKKAPMMQSQSRSCTELHKHLTSAQCCLQDRGLQPPCLQSP
160 170 180 190 200
250 260 270 280 290 300
pF1KE2 RLPAKEDKEPGEDCPSPQPAPASPRDSLALGRADPGAPVSQEDMQAMVQLIRYMHTYCLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RLPAKEDKEPGEDCPSPQPAPASPRDSLALGRADPGAPVSQEDMQAMVQLIRYMHTYCLP
210 220 230 240 250 260
310 320 330 340 350 360
pF1KE2 QRKLPPQTPEPLPKACSNPSQQVRSRPWSRHHSKASWAEFSILRELLAQDVLCDVSKPYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QRKLPPQTPEPLPKACSNPSQQVRSRPWSRHHSKASWAEFSILRELLAQDVLCDVSKPYR
270 280 290 300 310 320
370 380 390 400 410 420
pF1KE2 LATPVYASLTPRSRPRPPKDSQASPGRPSSVEEVRIAASPKSTGPRPSLRPLRLEVKREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LATPVYASLTPRSRPRPPKDSQASPGRPSSVEEVRIAASPKSTGPRPSLRPLRLEVKREV
330 340 350 360 370 380
430 440 450 460 470 480
pF1KE2 RRPARLQQQEEEDEEEEEEEEEEEKEEEEEWGRKRPGRGLPWTKLGRKLESSVCPVRRSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RRPARLQQQEEEDEEEEEEEEEEEKEEEEEWGRKRPGRGLPWTKLGRKLESSVCPVRRSR
390 400 410 420 430 440
490 500 510 520 530 540
pF1KE2 RLNPELGPWLTFADEPLVPSEPQGALPSLCLAPKAYDVERELGSPTDEDSGQDQQLLRGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RLNPELGPWLTFADEPLVPSEPQGALPSLCLAPKAYDVERELGSPTDEDSGQDQQLLRGP
450 460 470 480 490 500
550 560 570 580 590 600
pF1KE2 QIPALESPCESGCGDMDEDPSCPQLPPRDSPRCLMLALSQSDPTFGKKSFEQTLTVELCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QIPALESPCESGCGDMDEDPSCPQLPPRDSPRCLMLALSQSDPTFGKKSFEQTLTVELCG
510 520 530 540 550 560
610 620 630 640 650 660
pF1KE2 TAGLTPPTTPPYKPTEEDPFKPDIKHSLGKEIALSLPSPEGLSLKATPGAAHKLPKKHPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TAGLTPPTTPPYKPTEEDPFKPDIKHSLGKEIALSLPSPEGLSLKATPGAAHKLPKKHPE
570 580 590 600 610 620
670 680 690 700 710 720
pF1KE2 RSELLSHLRHATAQPASQAGQKRPFSCSFGDHDYCQVLRPEGVLQRKVLRSWEPSGVHLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RSELLSHLRHATAQPASQAGQKRPFSCSFGDHDYCQVLRPEGVLQRKVLRSWEPSGVHLE
630 640 650 660 670 680
730 740 750 760 770 780
pF1KE2 DWPQQGAPWAEAQAPGREEDRSCDAGAPPKDSTLLRDHEIRASLTKHFGLLETALEEEDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DWPQQGAPWAEAQAPGREEDRSCDAGAPPKDSTLLRDHEIRASLTKHFGLLETALEEEDL
690 700 710 720 730 740
790 800 810 820 830 840
pF1KE2 ASCKSPEYDTVFEDSSSSSGESSFLPEEEEEEGEEEEEDDEEEDSGVSPTCSDHCPYQSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ASCKSPEYDTVFEDSSSSSGESSFLPEEEEEEGEEEEEDDEEEDSGVSPTCSDHCPYQSP
750 760 770 780 790 800
850 860 870 880 890 900
pF1KE2 PSKANRQLCSRSRSSSGSSPCHSWSPATRRNFRCESRGPCSDRTPSIRHARKRREKAIGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PSKANRQLCSRSRSSSGSSPCHSWSPATRRNFRCESRGPCSDRTPSIRHARKRREKAIGE
810 820 830 840 850 860
910 920 930 940 950 960
pF1KE2 GRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYGFITYRCSEHAALSLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GRVVYIQNLSSDMSSRELKRRFEVFGEIEECEVLTRNRRGEKYGFITYRCSEHAALSLTK
870 880 890 900 910 920
970 980 990 1000 1010 1020
pF1KE2 GAALRKRNEPSFQLSYGGLRHFCWPRYTDYDSNSEEALPASGKSKYEAMDFDSLLKEAQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GAALRKRNEPSFQLSYGGLRHFCWPRYTDYDSNSEEALPASGKSKYEAMDFDSLLKEAQQ
930 940 950 960 970 980
pF1KE2 SLH
:::
CCDS54 SLH
>>CCDS73186.1 PPRC1 gene_id:23082|Hs108|chr10 (1400 aa)
initn: 592 init1: 278 opt: 522 Z-score: 322.0 bits: 71.6 E(32554): 1.3e-11
Smith-Waterman score: 577; 27.1% identity (47.6% similar) in 860 aa overlap (256-1022:579-1398)
230 240 250 260 270 280
pF1KE2 CLQDRGLQPPCLQSPRLPAKEDKEPGEDCPSPQPAPASPRDSLALGRADPGA--PVSQED
: : .: : ::. .::: : ::
CCDS73 PAKEGPLDLYPKLADTIQTNPIPTHLSLVDSAQASPM-PVDSV---EADPTAVGPVLAGP
550 560 570 580 590 600
290 300 310 320 330 340
pF1KE2 MQAMVQLIRYMHTYCLPQRKLPPQTPEPLPKACSNPSQQVRSRPWSRHHSKASWAEFSIL
. . :. : . :::: .. : : . .. : :
CCDS73 VPVDPGLVDLAST--------SSELVEPLP------AEPVLINPVLADSAAVDPAVVPIS
610 620 630 640 650
350 360 370 380 390
pF1KE2 RELLAQDVLCDVSKPYRLAT--PVYASLTP------RSRPRPPKDSQASPGRPSSVEEVR
.: :.. . : :: :: .::: .::: :. . .: . .:. ..
CCDS73 DNLPPVDAVPSGPAPVDLALVDPVPNDLTPVDPVLVKSRPTDPRRGAVSSALGGSAPQLL
660 670 680 690 700 710
400 410 420 430 440
pF1KE2 IAAS----PKSTGP--RPSLRPLRLEVKREVR----RPARLQQQEEEDEEEEEEEEEEEK
. . ::. : . . :..: . :: :. .: . ...... : ::.
CCDS73 VESESLDPPKTIIPEVKEVVDSLKIESGTSATTHEARPRPLSLSEYRRRRQQRQAETEER
720 730 740 750 760 770
450 460 470 480 490 500
pF1KE2 EEEEEWGRKRPGRGLPWTKLG-RKLESSVCPVRRSRRLNPELGPWLTFADEPLVPSEPQG
. : : : .:: : : . : : ... . .: : . ::: :.
CCDS73 SPQPPTG-KWP--SLPETPTGLADIPCLVIPPAPAKKTALQRSPE-TPLEICLVPVGPSP
780 790 800 810 820
510 520 530 540 550
pF1KE2 ALPSLCLAPKAYDVERELGSPTDEDSGQDQQLLRGPQIP------ALESPCESGC-----
: :: :. . .:::.. .:.. :: :. : :. .: .
CCDS73 ASPS----PEPPVSKPVASSPTEQVPSQEMPLLARPSPPVQSVSPAVPTPPSMSAALPFP
830 840 850 860 870 880
560 570 580 590
pF1KE2 -GDMDEDPSCPQLPPRDSPRCLMLALSQ--SDPTF-----------------GKKSFEQT
: . :: : :: .: : :... :: : .
CCDS73 AGGLGMPPSLP--PPPLQPPSLPLSMGPVLPDPFTHYAPLPSWPCYPHVSPSGYPCLPPP
890 900 910 920 930 940
600 610 620 630
pF1KE2 LTVELC-GTAGL--TPPT-----TPPYKPTEEDPFK-----------PDIKHSLGKEIAL
:: : :: : .::: .:: :. .:.. : .:. .
CCDS73 PTVPLVSGTPGAYAVPPTCSVPWAPP--PAPVSPYSSTCTYGPLGWGPGPQHAPFWSTVP
950 960 970 980 990
640 650 660 670 680
pF1KE2 SLPSPEGLSLKATPGAAHK---LPKKHPERSELLSHLRHAT-AQPASQAGQKRPFSCSF-
: : . .:.: . : :: :: . . :. : : .: .
CCDS73 PPPLPPASIGRAVPQPKMESRGTPAGPPENVLPLSMAPPLSLGLPGHGAPQTEPTKVEVK
1000 1010 1020 1030 1040 1050
690 700 710 720 730 740
pF1KE2 ----GDHDYCQVLRPEGVLQRKVLRSWEPSGVHLEDWP--QQGAPWAEAQAPGREEDRSC
. : .: : :.: :: .:. : .. : .. : ..
CCDS73 PVPASPHPKHKVSALVQSPQMKALACVSAEGVTVEE-PASERLKPETQETRPREKPPLPA
1060 1070 1080 1090 1100 1110
750 760 770 780 790 800
pF1KE2 DAGAP-PKDSTLLRDHEIRASLTKHFGLLETALEE--EDLASCKSPEYDTVFEDSSSSSG
..: :..::. . .. . .....: : . ::... . : . .:
CCDS73 TKAVPTPRQSTVPKLPAVHPARLRKLSFLPTPRTQGSEDVVQA------FISEIGIEASD
1120 1130 1140 1150 1160 1170
810 820 830 840 850
pF1KE2 ESSFLPEEEEEEGEEEEEDDEEEDS---GVS-PTCSDHC-PYQSPPSKANRQLCSRSRSS
::.: . :. :...: :: : : .::. . :... . : : ::
CCDS73 LSSLLEQFEKSEAKKECPPPAPADSLAVGNSGSSCSSSGRSRRCSSSSSSSSSSSSSSSS
1180 1190 1200 1210 1220 1230
860 870 880 890 900 910
pF1KE2 SGSSPCHSWSPATRRNFRCESRGPCSDRTPSIRHARKR---REKAIGEGRVVYIQNLSSD
:.:: .: ::. :: : . : :. .. :.: .:.:: : :::.: .. .
CCDS73 SSSSRSRSRSPSPRR--RSDRRRRYSSYRSHDHYQRQRVLQKERAIEERRVVFIGKIPGR
1240 1250 1260 1270 1280
920 930 940 950 960 970
pF1KE2 MSSRELKRRFEVFGEIEECEVLTRNRRGEKYGFITYRCSEHAALSLTKGAALRKRNEPSF
:. :::.:: :::::::: . : . :..:::.::: .:.: .. .: ::. .: :
CCDS73 MTRSELKQRFSVFGEIEECTIHFRVQ-GDNYGFVTYRYAEEAFAAIESGHKLRQADEQPF
1290 1300 1310 1320 1330 1340
980 990 1000 1010 1020
pF1KE2 QLSYGGLRHFCWPRYTDYDSNSEEALPASGKSKYEAMDFDSLLKEAQQSLH
.: .:: :.:: :.: ::: :. :: :::....:::.:::.::..:
CCDS73 DLCFGGRRQFCKRSYSDLDSNREDFDPAPVKSKFDSLDFDTLLKQAQKNLRR
1350 1360 1370 1380 1390 1400
1023 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Mar 22 11:42:48 2017 done: Wed Mar 22 11:42:49 2017
Total Scan time: 5.970 Total Display time: 0.180
Function used was FASTA [36.3.4 Apr, 2011]