Result of FASTA (omim) for
pFN21AE2599
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2599, 406 aa
1>>>pF1KE2599 406 - 406 aa - 406 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8388+/-0.000352; mu= 14.7293+/- 0.022
mean_var=82.6286+/-16.964, 0's: 0 Z-trim(115.8): 33 B-trim: 756 in 1/51
Lambda= 0.141094
statistics sampled from 26548 (26580) to 26548 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.682), E-opt: 0.2 (0.312), width: 16
Scan time: 6.550
The best scores are: opt bits E(85289)
XP_011527078 (OMIM: 610919) PREDICTED: mitochondri ( 406) 2737 566.8 3.2e-161
XP_016883295 (OMIM: 610919) PREDICTED: mitochondri ( 406) 2737 566.8 3.2e-161
XP_005260450 (OMIM: 610919) PREDICTED: mitochondri ( 406) 2737 566.8 3.2e-161
NP_056481 (OMIM: 610919) mitochondrial ribosome-as ( 406) 2737 566.8 3.2e-161
XP_006723837 (OMIM: 610919) PREDICTED: mitochondri ( 422) 2737 566.9 3.4e-161
XP_016883294 (OMIM: 610919) PREDICTED: mitochondri ( 434) 2737 566.9 3.4e-161
XP_016883297 (OMIM: 610919) PREDICTED: mitochondri ( 332) 1869 390.1 4.2e-108
XP_016883296 (OMIM: 610919) PREDICTED: mitochondri ( 360) 1869 390.1 4.5e-108
NP_149098 (OMIM: 610920) GTP-binding protein 10 is ( 387) 485 108.4 3.1e-23
NP_001036182 (OMIM: 610920) GTP-binding protein 10 ( 308) 393 89.6 1.1e-17
NP_004138 (OMIM: 603952) developmentally-regulated ( 367) 250 60.6 7.4e-09
NP_001317073 (OMIM: 602986) developmentally-regula ( 343) 200 50.4 8.1e-06
NP_001379 (OMIM: 602986) developmentally-regulated ( 364) 200 50.4 8.5e-06
XP_011522006 (OMIM: 602986) PREDICTED: development ( 364) 200 50.4 8.5e-06
XP_005256556 (OMIM: 602986) PREDICTED: development ( 385) 200 50.4 8.9e-06
>>XP_011527078 (OMIM: 610919) PREDICTED: mitochondrial r (406 aa)
initn: 2737 init1: 2737 opt: 2737 Z-score: 3015.3 bits: 566.8 E(85289): 3.2e-161
Smith-Waterman score: 2737; 100.0% identity (100.0% similar) in 406 aa overlap (1-406:1-406)
10 20 30 40 50 60
pF1KE2 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR
310 320 330 340 350 360
370 380 390 400
pF1KE2 DHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW
::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW
370 380 390 400
>>XP_016883295 (OMIM: 610919) PREDICTED: mitochondrial r (406 aa)
initn: 2737 init1: 2737 opt: 2737 Z-score: 3015.3 bits: 566.8 E(85289): 3.2e-161
Smith-Waterman score: 2737; 100.0% identity (100.0% similar) in 406 aa overlap (1-406:1-406)
10 20 30 40 50 60
pF1KE2 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR
310 320 330 340 350 360
370 380 390 400
pF1KE2 DHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW
370 380 390 400
>>XP_005260450 (OMIM: 610919) PREDICTED: mitochondrial r (406 aa)
initn: 2737 init1: 2737 opt: 2737 Z-score: 3015.3 bits: 566.8 E(85289): 3.2e-161
Smith-Waterman score: 2737; 100.0% identity (100.0% similar) in 406 aa overlap (1-406:1-406)
10 20 30 40 50 60
pF1KE2 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR
310 320 330 340 350 360
370 380 390 400
pF1KE2 DHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW
::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW
370 380 390 400
>>NP_056481 (OMIM: 610919) mitochondrial ribosome-associ (406 aa)
initn: 2737 init1: 2737 opt: 2737 Z-score: 3015.3 bits: 566.8 E(85289): 3.2e-161
Smith-Waterman score: 2737; 100.0% identity (100.0% similar) in 406 aa overlap (1-406:1-406)
10 20 30 40 50 60
pF1KE2 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR
310 320 330 340 350 360
370 380 390 400
pF1KE2 DHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW
::::::::::::::::::::::::::::::::::::::::::::::
NP_056 DHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW
370 380 390 400
>>XP_006723837 (OMIM: 610919) PREDICTED: mitochondrial r (422 aa)
initn: 2737 init1: 2737 opt: 2737 Z-score: 3015.0 bits: 566.9 E(85289): 3.4e-161
Smith-Waterman score: 2737; 100.0% identity (100.0% similar) in 406 aa overlap (1-406:17-422)
10 20 30 40
pF1KE2 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLL
::::::::::::::::::::::::::::::::::::::::::::
XP_006 MISSQCIETYDTSYGAMAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE2 SVGRADLAKHQELPGKKLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SVGRADLAKHQELPGKKLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPD
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE2 GGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVK
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE2 EGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTV
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE2 AHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIR
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE2 GAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVA
310 320 330 340 350 360
350 360 370 380 390 400
pF1KE2 NKIDLPEAQANLSQLRDHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NKIDLPEAQANLSQLRDHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPL
370 380 390 400 410 420
pF1KE2 RW
::
XP_006 RW
>>XP_016883294 (OMIM: 610919) PREDICTED: mitochondrial r (434 aa)
initn: 2737 init1: 2737 opt: 2737 Z-score: 3014.9 bits: 566.9 E(85289): 3.4e-161
Smith-Waterman score: 2737; 100.0% identity (100.0% similar) in 406 aa overlap (1-406:29-434)
10 20 30
pF1KE2 MAPARCFSARLRTVFQGVGHWALSTWAGLKPS
::::::::::::::::::::::::::::::::
XP_016 MRPSSSVSVSCPALNQVSHFANLTSVGAMAPARCFSARLRTVFQGVGHWALSTWAGLKPS
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE2 RLLPQRASPRLLSVGRADLAKHQELPGKKLLSEKKLKRYFVDYRRVLVCGGNGGAGASCF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLLPQRASPRLLSVGRADLAKHQELPGKKLLSEKKLKRYFVDYRRVLVCGGNGGAGASCF
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE2 HSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAV
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE2 LYIRVPVGTLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LYIRVPVGTLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPG
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE2 QQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHL
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE2 QIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYE
310 320 330 340 350 360
340 350 360 370 380 390
pF1KE2 KGLSARPHAIVANKIDLPEAQANLSQLRDHLGQEVIVLSALTGENLEQLLLHLKVLYDAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGLSARPHAIVANKIDLPEAQANLSQLRDHLGQEVIVLSALTGENLEQLLLHLKVLYDAY
370 380 390 400 410 420
400
pF1KE2 AEAELGQGRQPLRW
::::::::::::::
XP_016 AEAELGQGRQPLRW
430
>>XP_016883297 (OMIM: 610919) PREDICTED: mitochondrial r (332 aa)
initn: 1869 init1: 1869 opt: 1869 Z-score: 2061.7 bits: 390.1 E(85289): 4.2e-108
Smith-Waterman score: 1869; 100.0% identity (100.0% similar) in 275 aa overlap (1-275:1-275)
10 20 30 40 50 60
pF1KE2 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHI
:::::::::::::::::::::::::::::::::::
XP_016 LRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAGRTSRILPKWPTSPASYEAPTRTGV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 ERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLR
XP_016 WGPPSSGTSSAAAFSCSWWIFLSLSRGLKLTI
310 320 330
>>XP_016883296 (OMIM: 610919) PREDICTED: mitochondrial r (360 aa)
initn: 1869 init1: 1869 opt: 1869 Z-score: 2061.2 bits: 390.1 E(85289): 4.5e-108
Smith-Waterman score: 1869; 100.0% identity (100.0% similar) in 275 aa overlap (1-275:29-303)
10 20 30
pF1KE2 MAPARCFSARLRTVFQGVGHWALSTWAGLKPS
::::::::::::::::::::::::::::::::
XP_016 MRPSSSVSVSCPALNQVSHFANLTSVGAMAPARCFSARLRTVFQGVGHWALSTWAGLKPS
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE2 RLLPQRASPRLLSVGRADLAKHQELPGKKLLSEKKLKRYFVDYRRVLVCGGNGGAGASCF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLLPQRASPRLLSVGRADLAKHQELPGKKLLSEKKLKRYFVDYRRVLVCGGNGGAGASCF
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE2 HSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAV
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE2 LYIRVPVGTLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LYIRVPVGTLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPG
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE2 QQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHL
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE2 QIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYE
:::
XP_016 QIAGRTSRILPKWPTSPASYEAPTRTGVWGPPSSGTSSAAAFSCSWWIFLSLSRGLKLTI
310 320 330 340 350 360
>>NP_149098 (OMIM: 610920) GTP-binding protein 10 isofor (387 aa)
initn: 635 init1: 447 opt: 485 Z-score: 538.2 bits: 108.4 E(85289): 3.1e-23
Smith-Waterman score: 673; 39.2% identity (62.7% similar) in 367 aa overlap (68-396:9-350)
40 50 60 70 80 90
pF1KE2 RASPRLLSVGRADLAKHQELPGKKLLSEKKLKRY--FVDYRRVLVCGGNGGAGASCFHSE
...: :.: :... ::.:: :
NP_149 MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGY------
10 20 30
100 110 120 130 140 150
pF1KE2 PRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRY--QGF-SGEDGGSKNCF--GRSG
:: ::.::.:: : . : :. .:... .:: . : .: ..:: : .:
NP_149 PRL------GGEGGKGGDVWV-VAQNRMTLKQLKDRYPRKRFVAGVGANSKISALKGSKG
40 50 60 70 80
160 170 180 190 200
pF1KE2 AVLYIRVPVG-TLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPG
: :::: ... :.:.....:. .:. ..: :: ::: :: :.
NP_149 KDCEIPVPVGISVTDENGKIIGELNKENDRILVAQGGLGGKLLTNFL------PL-----
90 100 110 120 130
210 220 230 240 250 260
pF1KE2 QPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYE
::.:..::.:: .: .:.:::::::::::: .:.:.::.:.: ::::::..: . :
NP_149 -KGQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYS
140 150 160 170 180 190
270 280 290 300 310 320
pF1KE2 GHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLS--QPEPWTQVDD----
::.:::.::.:.:::.:.:.: ::.:::: : ::::::.: : ::
NP_149 DFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFET
200 210 220 230 240 250
330 340 350 360
pF1KE2 ---LKYELEMYEKGLSARPHAIVANKIDLPEAQAN----LSQLRD-----HLG-------
: :::.:.. :...: ...::.:::.:: . .:::.. ::
NP_149 IILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPE
260 270 280 290 300 310
370 380 390 400
pF1KE2 -----QEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW
:..: .::.:::..:.: .. : :. :
NP_149 RTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLLNLWISDTMSSTEP
320 330 340 350 360 370
NP_149 PSKHAVTTSKMDII
380
>>NP_001036182 (OMIM: 610920) GTP-binding protein 10 iso (308 aa)
initn: 513 init1: 358 opt: 393 Z-score: 438.4 bits: 89.6 E(85289): 1.1e-17
Smith-Waterman score: 482; 40.6% identity (62.3% similar) in 244 aa overlap (184-396:35-271)
160 170 180 190 200 210
pF1KE2 YIRVPVGTLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQ
::: ::::. ... .:: . . .
NP_001 SCVLFRKYGNFIDKLRLFTRGGSGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKDRYPR
10 20 30 40 50 60
220 230 240 250 260 270
pF1KE2 QRVLHLELKTVAHAGMVG-FPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHL
.: :: .: . :::::::::: .:.:.::.:.: ::::::..: . :
NP_001 KRF-------VAGVGANSKFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFK
70 80 90 100 110
280 290 300 310 320
pF1KE2 QIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLS--QPEPWTQVDD-------
::.:::.::.:.:::.:.:.: ::.:::: : ::::::.: : ::
NP_001 QISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIIL
120 130 140 150 160 170
330 340 350 360
pF1KE2 LKYELEMYEKGLSARPHAIVANKIDLPEAQAN----LSQLRD-----HLG----------
: :::.:.. :...: ...::.:::.:: . .:::.. ::
NP_001 LTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPERTV
180 190 200 210 220 230
370 380 390 400
pF1KE2 --QEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW
:..: .::.:::..:.: .. : :. :
NP_001 EFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLLNLWISDTMSSTEPPSK
240 250 260 270 280 290
NP_001 HAVTTSKMDII
300
406 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 16:45:50 2016 done: Tue Nov 8 16:45:51 2016
Total Scan time: 6.550 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]