FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2593, 332 aa
  1>>>pF1KE2593 332 - 332 aa - 332 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.5141+/-0.00109; mu= 0.0554+/- 0.066
 mean_var=349.5626+/-69.701, 0's: 0 Z-trim(114.0): 40  B-trim: 15 in 1/52
 Lambda= 0.068598
 statistics sampled from 14574 (14606) to 14574 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.726), E-opt: 0.2 (0.449), width:  16
 Scan time:  3.060

The best scores are:                                      opt bits E(32554)
CCDS14131.1 FAM9A gene_id:171482|Hs108|chrX        ( 332) 2116 222.7 3.3e-58
CCDS14132.1 FAM9B gene_id:171483|Hs108|chrX        ( 186)  542 66.6 1.8e-11


>>CCDS14131.1 FAM9A gene_id:171482|Hs108|chrX             (332 aa)
 initn: 2116 init1: 2116 opt: 2116  Z-score: 1158.4  bits: 222.7 E(32554): 3.3e-58
Smith-Waterman score: 2116; 100.0% identity (100.0% similar) in 332 aa overlap (1-332:1-332)

               10        20        30        40        50        60
pF1KE2 MEPVGRKRSRKAAKAQLEAQVTAAQGATKEGSGIASNFPGQPTMEPVGRKRSRKAAKAQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MEPVGRKRSRKAAKAQLEAQVTAAQGATKEGSGIASNFPGQPTMEPVGRKRSRKAAKAQL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 EAQVRAAPAKKHTGKDPVRDECEERNPFTETREEDVTDEHGEREPFAEKDEHTGIHTMKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EAQVRAAPAKKHTGKDPVRDECEERNPFTETREEDVTDEHGEREPFAEKDEHTGIHTMKL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 EHIAADIKKGLAAKREMIKIDKAAYRKTKNTIERALKKKQLKRQKRDYRHTRKLLNVLKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EHIAADIKKGLAAKREMIKIDKAAYRKTKNTIERALKKKQLKRQKRDYRHTRKLLNVLKE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 YIAEKQKDDEAEEAEAAAAAAEAAAAAEAAAAAAEVIVVEDEEEEEKEEEEEKEEEEEEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 YIAEKQKDDEAEEAEAAAAAAEAAAAAEAAAAAAEVIVVEDEEEEEKEEEEEKEEEEEEG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 EEEGGGEEGEEGGGGGEGEETEEEEEEEEEEEEEEQIKAFQEKQKRWQQPTGVRSWRLRE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EEEGGGEEGEEGGGGGEGEETEEEEEEEEEEEEEEQIKAFQEKQKRWQQPTGVRSWRLRE
              250       260       270       280       290       300

              310       320       330  
pF1KE2 MKPLLEQLLKAAKDTKDNYCIISSSEESELDN
       ::::::::::::::::::::::::::::::::
CCDS14 MKPLLEQLLKAAKDTKDNYCIISSSEESELDN
              310       320       330  

>>CCDS14132.1 FAM9B gene_id:171483|Hs108|chrX             (186 aa)
 initn: 549 init1: 322 opt: 542  Z-score: 319.5  bits: 66.6 E(32554): 1.8e-11
Smith-Waterman score: 584; 46.8% identity (57.7% similar) in 267 aa overlap (66-332:2-186)

          40        50        60        70        80        90     
pF1KE2 SNFPGQPTMEPVGRKRSRKAAKAQLEAQVRAAPAKKHTGKDPVRDECEERNPFTETREED
                                     :: .:::.::::::::::::: ::::::::
CCDS14                              MAAWGKKHAGKDPVRDECEERNRFTETREED
                                            10        20        30 

         100       110       120       130       140       150     
pF1KE2 VTDEHGEREPFAEKDEHTGIHTMKLEHIAADIKKGLAAKREMIKIDKAAYRKTKNTIERA
       ::::::::::::: ::::: .: : :  : :    :.:::. .:.::.   ::::  ..:
CCDS14 VTDEHGEREPFAETDEHTGANTKKPEDTAED----LTAKRKRMKMDKTC-SKTKNKSKHA
              40        50        60            70         80      

         160       170       180       190       200       210     
pF1KE2 LKKKQLKRQKRDYRHTRKLLNVLKEYIAEKQKDDEAEEAEAAAAAAEAAAAAEAAAAAAE
       :.::::::::::: :. ::::::.:::...::                            
CCDS14 LRKKQLKRQKRDYIHSLKLLNVLEEYITDEQK----------------------------
         90       100       110                                    

         220       230       240       250       260       270     
pF1KE2 VIVVEDEEEEEKEEEEEKEEEEEEGEEEGGGEEGEEGGGGGEGEETEEEEEEEEEEEEEE
                         ::::::::::                               :
CCDS14 ------------------EEEEEEGEEE-------------------------------E
                        120                                        

         280       290       300       310       320       330  
pF1KE2 QIKAFQEKQKRWQQPTGVRSWRLREMKPLLEQLLKAAKDTKDNYCIISSSEESELDN
        :. :::.::.:::  .::  ::.::: : .:..:: .: .:    . :.:.:::::
CCDS14 LIRIFQEQQKKWQQYRSVRRERLKEMKLLRDQFVKALEDFEDLCDRVFSDEDSELDN
     130       140       150       160       170       180      




332 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 16:44:39 2016 done: Tue Nov  8 16:44:39 2016
 Total Scan time:  3.060 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]