Result of FASTA (ccds) for
pFN21AE2584
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2584, 206 aa
1>>>pF1KE2584 206 - 206 aa - 206 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3039+/-0.000784; mu= 9.2088+/- 0.047
mean_var=86.0743+/-17.361, 0's: 0 Z-trim(109.3): 38 B-trim: 523 in 1/50
Lambda= 0.138241
statistics sampled from 10749 (10780) to 10749 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.711), E-opt: 0.2 (0.331), width: 16
Scan time: 2.040
The best scores are: opt bits E(32554)
CCDS13540.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 206) 1300 268.5 2e-72
CCDS13545.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 200) 997 208.1 3e-54
CCDS13542.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 229) 997 208.1 3.4e-54
CCDS13543.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 209) 994 207.5 4.8e-54
CCDS13544.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 220) 983 205.3 2.3e-53
CCDS74752.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 222) 983 205.3 2.3e-53
CCDS13541.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 186) 710 150.8 4.9e-37
CCDS74753.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 152) 664 141.6 2.4e-34
CCDS58785.1 TPD52L2 gene_id:7165|Hs108|chr20 ( 163) 532 115.3 2.1e-26
CCDS47879.1 TPD52 gene_id:7163|Hs108|chr8 ( 207) 447 98.4 3.3e-21
CCDS75759.1 TPD52 gene_id:7163|Hs108|chr8 ( 247) 443 97.7 6.7e-21
CCDS75757.1 TPD52 gene_id:7163|Hs108|chr8 ( 238) 433 95.6 2.6e-20
CCDS83122.1 TPD52L1 gene_id:7164|Hs108|chr6 ( 209) 391 87.2 7.6e-18
CCDS5130.1 TPD52L1 gene_id:7164|Hs108|chr6 ( 204) 385 86.0 1.7e-17
CCDS43502.1 TPD52L1 gene_id:7164|Hs108|chr6 ( 175) 382 85.4 2.3e-17
CCDS55249.1 TPD52 gene_id:7163|Hs108|chr8 ( 184) 333 75.7 2.1e-14
CCDS34912.1 TPD52 gene_id:7163|Hs108|chr8 ( 224) 329 74.9 4.3e-14
CCDS75758.1 TPD52 gene_id:7163|Hs108|chr8 ( 233) 329 74.9 4.4e-14
CCDS34985.1 TPD52L3 gene_id:89882|Hs108|chr9 ( 132) 317 72.4 1.4e-13
CCDS34984.1 TPD52L3 gene_id:89882|Hs108|chr9 ( 136) 317 72.4 1.5e-13
CCDS34986.1 TPD52L3 gene_id:89882|Hs108|chr9 ( 140) 317 72.4 1.5e-13
CCDS34528.1 TPD52L1 gene_id:7164|Hs108|chr6 ( 131) 310 71.0 3.7e-13
CCDS34527.1 TPD52L1 gene_id:7164|Hs108|chr6 ( 144) 310 71.0 4e-13
CCDS75514.1 TPD52L1 gene_id:7164|Hs108|chr6 ( 102) 307 70.4 4.5e-13
CCDS75513.1 TPD52L1 gene_id:7164|Hs108|chr6 ( 191) 310 71.1 5.1e-13
>>CCDS13540.1 TPD52L2 gene_id:7165|Hs108|chr20 (206 aa)
initn: 1300 init1: 1300 opt: 1300 Z-score: 1413.7 bits: 268.5 E(32554): 2e-72
Smith-Waterman score: 1300; 100.0% identity (100.0% similar) in 206 aa overlap (1-206:1-206)
10 20 30 40 50 60
pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG
130 140 150 160 170 180
190 200
pF1KE2 DRENGSDNLPSSAGSGDKPLSDPAPF
::::::::::::::::::::::::::
CCDS13 DRENGSDNLPSSAGSGDKPLSDPAPF
190 200
>>CCDS13545.1 TPD52L2 gene_id:7165|Hs108|chr20 (200 aa)
initn: 1022 init1: 694 opt: 997 Z-score: 1087.3 bits: 208.1 E(32554): 3e-54
Smith-Waterman score: 1083; 84.5% identity (84.5% similar) in 220 aa overlap (1-206:1-200)
10 20 30 40 50 60
pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAY--------------
70 80 90 100
130 140 150 160
pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDM--------------RNSATFKS
:::::::::::::::::::::::::::::::: ::::::::
CCDS13 ------KKTQETLSQAGQKTSAALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKS
110 120 130 140 150 160
170 180 190 200
pF1KE2 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
::::::::::::::::::::::::::::::::::::::::
CCDS13 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
170 180 190 200
>>CCDS13542.1 TPD52L2 gene_id:7165|Hs108|chr20 (229 aa)
initn: 995 init1: 995 opt: 997 Z-score: 1086.4 bits: 208.1 E(32554): 3.4e-54
Smith-Waterman score: 1244; 90.0% identity (90.0% similar) in 229 aa overlap (1-206:1-229)
10 20 30 40 50 60
pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
70 80 90 100 110 120
130 140 150
pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMR---------------------
:::::::::::::::::::::::::::::::::::::::
CCDS13 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA
130 140 150 160 170 180
160 170 180 190 200
pF1KE2 --NSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
190 200 210 220
>>CCDS13543.1 TPD52L2 gene_id:7165|Hs108|chr20 (209 aa)
initn: 1037 init1: 694 opt: 994 Z-score: 1083.8 bits: 207.5 E(32554): 4.8e-54
Smith-Waterman score: 1065; 81.2% identity (81.2% similar) in 229 aa overlap (1-206:1-209)
10 20 30 40 50 60
pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAY--------------
70 80 90 100
130 140 150
pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMR---------------------
:::::::::::::::::::::::::::::::::
CCDS13 ------KKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA
110 120 130 140 150 160
160 170 180 190 200
pF1KE2 --NSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
170 180 190 200
>>CCDS13544.1 TPD52L2 gene_id:7165|Hs108|chr20 (220 aa)
initn: 1008 init1: 983 opt: 983 Z-score: 1071.6 bits: 205.3 E(32554): 2.3e-53
Smith-Waterman score: 1262; 93.6% identity (93.6% similar) in 220 aa overlap (1-206:1-220)
10 20 30 40 50 60
pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
70 80 90 100 110 120
130 140 150 160
pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDM--------------RNSATFKS
:::::::::::::::::::::::::::::::::::::: ::::::::
CCDS13 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKS
130 140 150 160 170 180
170 180 190 200
pF1KE2 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
::::::::::::::::::::::::::::::::::::::::
CCDS13 FEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
190 200 210 220
>>CCDS74752.1 TPD52L2 gene_id:7165|Hs108|chr20 (222 aa)
initn: 983 init1: 983 opt: 983 Z-score: 1071.5 bits: 205.3 E(32554): 2.3e-53
Smith-Waterman score: 983; 100.0% identity (100.0% similar) in 158 aa overlap (1-158:1-158)
10 20 30 40 50 60
pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG
::::::::::::::::::::::::::::::::::::::
CCDS74 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSLRLWVTERTAVTTSLPQRGVV
130 140 150 160 170 180
190 200
pF1KE2 DRENGSDNLPSSAGSGDKPLSDPAPF
CCDS74 TSPCRIPHLSKPVVASPAAEHTQPSLSITAAALFSGAASQGG
190 200 210 220
>>CCDS13541.1 TPD52L2 gene_id:7165|Hs108|chr20 (186 aa)
initn: 719 init1: 694 opt: 710 Z-score: 778.5 bits: 150.8 E(32554): 4.9e-37
Smith-Waterman score: 1121; 90.3% identity (90.3% similar) in 206 aa overlap (1-206:1-186)
10 20 30 40 50 60
pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAY--------------
70 80 90 100
130 140 150 160 170 180
pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ------KKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG
110 120 130 140 150 160
190 200
pF1KE2 DRENGSDNLPSSAGSGDKPLSDPAPF
::::::::::::::::::::::::::
CCDS13 DRENGSDNLPSSAGSGDKPLSDPAPF
170 180
>>CCDS74753.1 TPD52L2 gene_id:7165|Hs108|chr20 (152 aa)
initn: 955 init1: 659 opt: 664 Z-score: 730.3 bits: 141.6 E(32554): 2.4e-34
Smith-Waterman score: 851; 73.8% identity (73.8% similar) in 206 aa overlap (1-206:1-152)
10 20 30 40 50 60
pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
:::::::::::::::::::::::::::::::::::::::::::::
CCDS74 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA---------------
70 80 90 100
130 140 150 160 170 180
pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG
:::::::::::::::::::::
CCDS74 ---------------------------------------NSATFKSFEDRVGTIKSKVVG
110 120
190 200
pF1KE2 DRENGSDNLPSSAGSGDKPLSDPAPF
::::::::::::::::::::::::::
CCDS74 DRENGSDNLPSSAGSGDKPLSDPAPF
130 140 150
>>CCDS58785.1 TPD52L2 gene_id:7165|Hs108|chr20 (163 aa)
initn: 586 init1: 516 opt: 532 Z-score: 587.5 bits: 115.3 E(32554): 2.1e-26
Smith-Waterman score: 932; 88.7% identity (88.7% similar) in 177 aa overlap (30-206:7-163)
10 20 30 40 50 60
pF1KE2 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
:::::::::::::::::::::::::::::::
CCDS58 MDSAGQGVAARTPAVEGLTEAEEEELRAELTKVEEEI
10 20 30
70 80 90 100 110 120
pF1KE2 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAY--------------
40 50 60 70 80
130 140 150 160 170 180
pF1KE2 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ------KKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVG
90 100 110 120 130
190 200
pF1KE2 DRENGSDNLPSSAGSGDKPLSDPAPF
::::::::::::::::::::::::::
CCDS58 DRENGSDNLPSSAGSGDKPLSDPAPF
140 150 160
>>CCDS47879.1 TPD52 gene_id:7163|Hs108|chr8 (207 aa)
initn: 466 init1: 326 opt: 447 Z-score: 494.3 bits: 98.4 E(32554): 3.3e-21
Smith-Waterman score: 461; 43.7% identity (64.9% similar) in 222 aa overlap (10-205:1-200)
10 20 30 40 50
pF1KE2 MDSAGQDINLNSPNKGLL-SDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEE
.. ..::: .: . . : ::: :.: :.: :.:::: ::.:::::
CCDS47 MDRGEQGLLRTDPVPEEGED--VAATISATETLSEEEQEELRRELAKVEEE
10 20 30 40
60 70 80 90 100 110
pF1KE2 IVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEK
: :: :::::::.: .:.::.::...: :::::....:.:: ..:::
CCDS47 IQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAY-------------
50 60 70 80 90
120 130 140 150
pF1KE2 VTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGD----------------------
:::.:::::::::.:::.:.:::.:..:: :
CCDS47 -------KKTSETLSQAGQKASAAFSSVGSVITKKLEDVKLQAFSHSFSIRSIQHSISMP
100 110 120 130 140
160 170 180 190 200
pF1KE2 -MRNSATFKSFEDRVGTIKSKVVGDRENGSD--NLPSSAGSGDKPLSDPAPF
:::: ::::::..: ..:::: : . :.: .. .::.... ..: :
CCDS47 AMRNSPTFKSFEEKVENLKSKVGGTKPAGGDFGEVLNSAANASATTTEPLPEKTQESL
150 160 170 180 190 200
206 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 16:34:05 2016 done: Tue Nov 8 16:34:06 2016
Total Scan time: 2.040 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]