Result of FASTA (ccds) for
pFN21AE2550
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2550, 383 aa
1>>>pF1KE2550 383 - 383 aa - 383 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3269+/-0.000795; mu= 16.7955+/- 0.048
mean_var=74.0240+/-15.012, 0's: 0 Z-trim(107.5): 70 B-trim: 3 in 1/50
Lambda= 0.149069
statistics sampled from 9554 (9629) to 9554 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.677), E-opt: 0.2 (0.296), width: 16
Scan time: 2.550
The best scores are: opt bits E(32554)
CCDS56412.1 MICA gene_id:100507436|Hs108|chr6 ( 332) 2134 468.2 4.6e-132
CCDS43449.1 MICB gene_id:4277|Hs108|chr6 ( 383) 2108 462.7 2.5e-130
CCDS75423.1 MICB gene_id:4277|Hs108|chr6 ( 351) 1938 426.1 2.4e-119
CCDS75421.1 MICA gene_id:100507436|Hs108|chr6 ( 235) 1467 324.7 5.4e-89
CCDS75422.1 MICB gene_id:4277|Hs108|chr6 ( 340) 1283 285.2 5.9e-77
CCDS34393.1 C gene_id:3107|Hs108|chr6 ( 366) 517 120.5 2.4e-27
CCDS34394.1 B gene_id:3106|Hs108|chr6 ( 362) 510 119.0 6.8e-27
CCDS34379.1 E gene_id:3133|Hs108|chr6 ( 358) 507 118.3 1.1e-26
CCDS34373.1 A gene_id:3105|Hs108|chr6 ( 365) 507 118.3 1.1e-26
CCDS4668.1 G gene_id:3135|Hs108|chr6 ( 338) 488 114.2 1.7e-25
CCDS43438.1 F gene_id:3134|Hs108|chr6 ( 346) 488 114.2 1.8e-25
CCDS43437.1 F gene_id:3134|Hs108|chr6 ( 442) 488 114.3 2.1e-25
CCDS75412.1 HFE gene_id:3077|Hs108|chr6 ( 337) 479 112.3 6.6e-25
CCDS4578.1 HFE gene_id:3077|Hs108|chr6 ( 348) 479 112.3 6.7e-25
CCDS47387.1 HFE gene_id:3077|Hs108|chr6 ( 325) 469 110.1 2.8e-24
CCDS1342.1 MR1 gene_id:3140|Hs108|chr1 ( 341) 468 109.9 3.4e-24
CCDS4580.1 HFE gene_id:3077|Hs108|chr6 ( 260) 403 95.9 4.4e-20
CCDS5680.1 AZGP1 gene_id:563|Hs108|chr7 ( 298) 374 89.7 3.7e-18
CCDS12770.1 FCGRT gene_id:2217|Hs108|chr19 ( 365) 332 80.7 2.3e-15
CCDS53442.1 MR1 gene_id:3140|Hs108|chr1 ( 296) 309 75.7 6e-14
CCDS4581.1 HFE gene_id:3077|Hs108|chr6 ( 168) 289 71.2 7.5e-13
CCDS4579.1 HFE gene_id:3077|Hs108|chr6 ( 256) 289 71.4 1.1e-12
CCDS54975.1 HFE gene_id:3077|Hs108|chr6 ( 246) 264 66.0 4.2e-11
CCDS54974.1 HFE gene_id:3077|Hs108|chr6 ( 334) 264 66.1 5.4e-11
CCDS47386.1 HFE gene_id:3077|Hs108|chr6 ( 242) 261 65.3 6.5e-11
>>CCDS56412.1 MICA gene_id:100507436|Hs108|chr6 (332 aa)
initn: 2128 init1: 2128 opt: 2134 Z-score: 2484.4 bits: 468.2 E(32554): 4.6e-132
Smith-Waterman score: 2134; 93.9% identity (97.0% similar) in 330 aa overlap (1-330:1-329)
10 20 30 40 50 60
pF1KE2 MGLGPVFLLLAGIFPFAPPGAAAEPHSLRYNLTVLSWDGSVQSGFLTEVHLDGQPFLRCD
::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: :
CCDS56 MGLGPVFLLLAGIFPFAPPGAAAEPHSLRYNLTVLSWDGSVQSGFLAEVHLDGQPFLRYD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 RQKCRAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKEGLHSLQEIRVCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 RQKCRAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKEGLHSLQEIRVCE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 IHEDNSTRSSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAMNVRNFLKEDAMKTKTHY
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
CCDS56 IHEDNSTRSSQHFYYDGELFLSQNLETEEWTVPQSSRAQTLAMNVRNFLKEDAMKTKTHY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 HAMHADCLQELRRYLKSGVVLRRTVPPMVNVTRSEASEGNITVTCRASGFYPWNITLSWR
:::::::::::::::.::::::::::::::::::::::::::::::::.::: :: :.::
CCDS56 HAMHADCLQELRRYLESGVVLRRTVPPMVNVTRSEASEGNITVTCRASSFYPRNIILTWR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 QDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSGNHSTHPVPSGKV
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
CCDS56 QDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICRGEEQRFTCYMEHSGNHSTHPVPSGKV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 LVLQSHWQTFHVSAVAAAAIFVIIIFYVRCCKKKTSAAEGPELVSLQVLDQHPVGTSDHR
:::::::::::::::::. . . .: :
CCDS56 LVLQSHWQTFHVSAVAAGCCY-FCYYYFLCPLL
310 320 330
>>CCDS43449.1 MICB gene_id:4277|Hs108|chr6 (383 aa)
initn: 2108 init1: 2108 opt: 2108 Z-score: 2453.3 bits: 462.7 E(32554): 2.5e-130
Smith-Waterman score: 2108; 82.8% identity (91.4% similar) in 383 aa overlap (1-383:1-383)
10 20 30 40 50 60
pF1KE2 MGLGPVFLLLAGIFPFAPPGAAAEPHSLRYNLTVLSWDGSVQSGFLTEVHLDGQPFLRCD
:::: :.:.:: ::::::.:::::::::::: ::: :::::::::.: ::::::::: :
CCDS43 MGLGRVLLFLAVAFPFAPPAAAAEPHSLRYNLMVLSQDGSVQSGFLAEGHLDGQPFLRYD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 RQKCRAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKEGLHSLQEIRVCE
::: ::::::::::.::: :::: ::.::: ::.::: ::.:::::: ::::::::::::
CCDS43 RQKRRAKPQGQWAENVLGAKTWDTETEDLTENGQDLRRTLTHIKDQKGGLHSLQEIRVCE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 IHEDNSTRSSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAMNVRNFLKEDAMKTKTHY
::::.:::.:.::::::::::::::::.: :.::::::::::::: :: :::::::::::
CCDS43 IHEDSSTRGSRHFYYDGELFLSQNLETQESTVPQSSRAQTLAMNVTNFWKEDAMKTKTHY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 HAMHADCLQELRRYLKSGVVLRRTVPPMVNVTRSEASEGNITVTCRASGFYPWNITLSWR
.::.:::::.:.:::::::..::::::::::: ::.::::::::::::.::: ::::.::
CCDS43 RAMQADCLQKLQRYLKSGVAIRRTVPPMVNVTCSEVSEGNITVTCRASSFYPRNITLTWR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 QDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSGNHSTHPVPSGKV
::::::::.::::::::::::::::::::::: :::::::::::::::::.::::::::.
CCDS43 QDGVSLSHNTQQWGDVLPDGNGTYQTWVATRIRQGEEQRFTCYMEHSGNHGTHPVPSGKA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 LVLQSHWQTFHVSAVAAAAIFVIIIFYVRCCKKKTSAAEGPELVSLQVLDQHPVGTSDHR
:::::. : ..: . .:::. : :::::::::::::::::::::::::::.:::
CCDS43 LVLQSQRTDFPYVSAAMPCFVIIIILCVPCCKKKTSAAEGPELVSLQVLDQHPVGTGDHR
310 320 330 340 350 360
370 380
pF1KE2 DATQLGFQPLMSDLGSTGSTEGT
::.::::::::: :::::::::
CCDS43 DAAQLGFQPLMSATGSTGSTEGT
370 380
>>CCDS75423.1 MICB gene_id:4277|Hs108|chr6 (351 aa)
initn: 1938 init1: 1938 opt: 1938 Z-score: 2256.2 bits: 426.1 E(32554): 2.4e-119
Smith-Waterman score: 1938; 83.1% identity (91.7% similar) in 350 aa overlap (34-383:2-351)
10 20 30 40 50 60
pF1KE2 GPVFLLLAGIFPFAPPGAAAEPHSLRYNLTVLSWDGSVQSGFLTEVHLDGQPFLRCDRQK
::: :::::::::.: ::::::::: ::::
CCDS75 MVLSQDGSVQSGFLAEGHLDGQPFLRYDRQK
10 20 30
70 80 90 100 110 120
pF1KE2 CRAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKEGLHSLQEIRVCEIHE
::::::::::.::: :::: ::.::: ::.::: ::.:::::: :::::::::::::::
CCDS75 RRAKPQGQWAENVLGAKTWDTETEDLTENGQDLRRTLTHIKDQKGGLHSLQEIRVCEIHE
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE2 DNSTRSSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAMNVRNFLKEDAMKTKTHYHAM
:.:::.:.::::::::::::::::.: :.::::::::::::: :: :::::::::::.::
CCDS75 DSSTRGSRHFYYDGELFLSQNLETQESTVPQSSRAQTLAMNVTNFWKEDAMKTKTHYRAM
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE2 HADCLQELRRYLKSGVVLRRTVPPMVNVTRSEASEGNITVTCRASGFYPWNITLSWRQDG
.:::::.:.:::::::..::::::::::: ::.::::::::::::.::: ::::.:::::
CCDS75 QADCLQKLQRYLKSGVAIRRTVPPMVNVTCSEVSEGNITVTCRASSFYPRNITLTWRQDG
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE2 VSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSGNHSTHPVPSGKVLVL
:::::.::::::::::::::::::::::: :::::::::::::::::.::::::::.:::
CCDS75 VSLSHNTQQWGDVLPDGNGTYQTWVATRIRQGEEQRFTCYMEHSGNHGTHPVPSGKALVL
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE2 QSHWQTFHVSAVAAAAIFVIIIFYVRCCKKKTSAAEGPELVSLQVLDQHPVGTSDHRDAT
::. : ..: . .:::. : :::::::::::::::::::::::::::.:::::.
CCDS75 QSQRTDFPYVSAAMPCFVIIIILCVPCCKKKTSAAEGPELVSLQVLDQHPVGTGDHRDAA
280 290 300 310 320 330
370 380
pF1KE2 QLGFQPLMSDLGSTGSTEGT
::::::::: :::::::::
CCDS75 QLGFQPLMSATGSTGSTEGT
340 350
>>CCDS75421.1 MICA gene_id:100507436|Hs108|chr6 (235 aa)
initn: 1461 init1: 1461 opt: 1467 Z-score: 1711.3 bits: 324.7 E(32554): 5.4e-89
Smith-Waterman score: 1467; 92.3% identity (96.1% similar) in 233 aa overlap (98-330:1-232)
70 80 90 100 110 120
pF1KE2 PQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKEGLHSLQEIRVCEIHEDNST
::::::::::::::::::::::::::::::
CCDS75 MTLAHIKDQKEGLHSLQEIRVCEIHEDNST
10 20 30
130 140 150 160 170 180
pF1KE2 RSSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAMNVRNFLKEDAMKTKTHYHAMHADC
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
CCDS75 RSSQHFYYDGELFLSQNLETEEWTVPQSSRAQTLAMNVRNFLKEDAMKTKTHYHAMHADC
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE2 LQELRRYLKSGVVLRRTVPPMVNVTRSEASEGNITVTCRASGFYPWNITLSWRQDGVSLS
::::::::.::::::::::::::::::::::::::::::::.::: :: :.:::::::::
CCDS75 LQELRRYLESGVVLRRTVPPMVNVTRSEASEGNITVTCRASSFYPRNIILTWRQDGVSLS
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE2 HDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSGNHSTHPVPSGKVLVLQSHW
::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::
CCDS75 HDTQQWGDVLPDGNGTYQTWVATRICRGEEQRFTCYMEHSGNHSTHPVPSGKVLVLQSHW
160 170 180 190 200 210
310 320 330 340 350 360
pF1KE2 QTFHVSAVAAAAIFVIIIFYVRCCKKKTSAAEGPELVSLQVLDQHPVGTSDHRDATQLGF
::::::::::. . . .: :
CCDS75 QTFHVSAVAAGCCY-FCYYYFLCPLL
220 230
>>CCDS75422.1 MICB gene_id:4277|Hs108|chr6 (340 aa)
initn: 1844 init1: 1283 opt: 1283 Z-score: 1495.1 bits: 285.2 E(32554): 5.9e-77
Smith-Waterman score: 1760; 73.1% identity (80.7% similar) in 383 aa overlap (1-383:1-340)
10 20 30 40 50 60
pF1KE2 MGLGPVFLLLAGIFPFAPPGAAAEPHSLRYNLTVLSWDGSVQSGFLTEVHLDGQPFLRCD
:::: :.:.:: ::::::.:::::::::::: ::: :::::::::.: ::::::::: :
CCDS75 MGLGRVLLFLAVAFPFAPPAAAAEPHSLRYNLMVLSQDGSVQSGFLAEGHLDGQPFLRYD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 RQKCRAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIKDQKEGLHSLQEIRVCE
::: ::::::::::.::: :::: ::.::: ::.::: ::.:::::: :.
CCDS75 RQKRRAKPQGQWAENVLGAKTWDTETEDLTENGQDLRRTLTHIKDQK-GV----------
70 80 90 100
130 140 150 160 170 180
pF1KE2 IHEDNSTRSSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAMNVRNFLKEDAMKTKTHY
::::::::::::: :: :::::::::::
CCDS75 --------------------------------PQSSRAQTLAMNVTNFWKEDAMKTKTHY
110 120 130
190 200 210 220 230 240
pF1KE2 HAMHADCLQELRRYLKSGVVLRRTVPPMVNVTRSEASEGNITVTCRASGFYPWNITLSWR
.::.:::::.:.:::::::..::::::::::: ::.::::::::::::.::: ::::.::
CCDS75 RAMQADCLQKLQRYLKSGVAIRRTVPPMVNVTCSEVSEGNITVTCRASSFYPRNITLTWR
140 150 160 170 180 190
250 260 270 280 290 300
pF1KE2 QDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSGNHSTHPVPSGKV
::::::::.::::::::::::::::::::::: :::::::::::::::::.::::::::.
CCDS75 QDGVSLSHNTQQWGDVLPDGNGTYQTWVATRIRQGEEQRFTCYMEHSGNHGTHPVPSGKA
200 210 220 230 240 250
310 320 330 340 350 360
pF1KE2 LVLQSHWQTFHVSAVAAAAIFVIIIFYVRCCKKKTSAAEGPELVSLQVLDQHPVGTSDHR
:::::. : ..: . .:::. : :::::::::::::::::::::::::::.:::
CCDS75 LVLQSQRTDFPYVSAAMPCFVIIIILCVPCCKKKTSAAEGPELVSLQVLDQHPVGTGDHR
260 270 280 290 300 310
370 380
pF1KE2 DATQLGFQPLMSDLGSTGSTEGT
::.::::::::: :::::::::
CCDS75 DAAQLGFQPLMSATGSTGSTEGT
320 330 340
>>CCDS34393.1 C gene_id:3107|Hs108|chr6 (366 aa)
initn: 363 init1: 150 opt: 517 Z-score: 604.3 bits: 120.5 E(32554): 2.4e-27
Smith-Waterman score: 517; 30.2% identity (63.2% similar) in 351 aa overlap (6-340:9-342)
10 20 30 40 50
pF1KE2 MGLGPVFLLLAGIFPFAPPGAAAEPHSLRYNLTVLSWDGSVQSGFLTEVHLDGQPFL
..:::.: . .. : . ::.:: :..: : . :.. ..: :.
CCDS34 MRVMAPRALLLLLSGGLALTETWACS--HSMRYFDTAVSRPGRGEPRFISVGYVDDTQFV
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 RCDRQKC--RAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIK---DQKE-GLH
: : . :..:.. :.:. : . :::::. ... :..: ... .:.: : :
CCDS34 RFDSDAASPRGEPRAPWVEQE-GPEYWDRETQKYKRQAQADRVSLRNLRGYYNQSEDGSH
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 SLQEIRVCEIHEDNST-RSSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAMNVRNFLK
.::.. :.. :. :. .. :::. ... : . . :: :.: :. .. :
CCDS34 TLQRMSGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTA-----ADTAAQITQR--K
120 130 140 150 160 170
180 190 200 210 220
pF1KE2 EDAMKTKTHYHA-MHADCLQELRRYLKSGV-VLRRTVPPMVNVTRSEASEGNITVTCRAS
.: .. . .: ... :.. :::::..: .:.:. :: ..::. :. . :. : :
CCDS34 LEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHEATLRCWAL
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE2 GFYPWNITLSWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSG
:::: .:::.:..:: . ..::. .. : :.::.: :.:. . .:.:::.::.:.: :
CCDS34 GFYPAEITLTWQRDGEDQTQDTELV-ETRPAGDGTFQKWAAVVVPSGQEQRYTCHMQHEG
240 250 260 270 280
290 300 310 320 330 340
pF1KE2 NH-----STHPV--PSGKVLVLQSHWQTFHVSAVAAAAIFVIIIFYVRCCKKKTSAAEGP
. : .: :. .. . . .. : :: .:.. ... :..:.:...:
CCDS34 LQEPLTLSWEPSSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMM------CRRKSSGGKGG
290 300 310 320 330 340
350 360 370 380
pF1KE2 ELVSLQVLDQHPVGTSDHRDATQLGFQPLMSDLGSTGSTEGT
CCDS34 SCSQAACSNSAQGSDESLITCKA
350 360
>>CCDS34394.1 B gene_id:3106|Hs108|chr6 (362 aa)
initn: 300 init1: 149 opt: 510 Z-score: 596.3 bits: 119.0 E(32554): 6.8e-27
Smith-Waterman score: 510; 29.2% identity (61.6% similar) in 349 aa overlap (6-340:9-341)
10 20 30 40 50
pF1KE2 MGLGPVFLLLAGIFPFAPPGAAAEPHSLRYNLTVLSWDGSVQSGFLTEVHLDGQPFL
:.:::.. . .. :.. ::.:: : .: : . :.. ..: :.
CCDS34 MLVMAPRTVLLLLSAALALTETWAGS--HSMRYFYTSVSRPGRGEPRFISVGYVDDTQFV
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 RCDRQKC--RAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIK---DQKE-GLH
: : . : .:.. : :. : . :::.:. .... : .: ... .:.: : :
CCDS34 RFDSDAASPREEPRAPWIEQE-GPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSH
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 SLQEIRVCEIHEDNST-RSSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAMNVRNFLK
.:: . :.. :. :. ... :::. ... : . . :: : : .. .
CCDS34 TLQSMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWT------AADTAAQITQRKW
120 130 140 150 160 170
180 190 200 210 220
pF1KE2 EDAMKTKTHYHAMHADCLQELRRYLKSGV-VLRRTVPPMVNVTRSEASEGNITVTCRASG
: : ... . ....:.. :::::..: :.:. :: ..::. :. . :. : : :
CCDS34 EAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALG
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE2 FYPWNITLSWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSGN
::: .:::.:..:: . ..::. .. : :. :.: :.:. . .:::::.::...: :
CCDS34 FYPAEITLTWQRDGEDQTQDTELV-ETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEG-
240 250 260 270 280
290 300 310 320 330 340
pF1KE2 HSTHPVPSGKVLVLQSHWQTFH--VSAVAAAAIFVIIIFYVRC----CKKKTSAAEGPEL
.:. .: . :. :. ::. :....... . :..:.:...:
CCDS34 -----LPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSY
290 300 310 320 330 340
350 360 370 380
pF1KE2 VSLQVLDQHPVGTSDHRDATQLGFQPLMSDLGSTGSTEGT
CCDS34 SQAACSDSAQGSDVSLTA
350 360
>>CCDS34379.1 E gene_id:3133|Hs108|chr6 (358 aa)
initn: 408 init1: 146 opt: 507 Z-score: 592.8 bits: 118.3 E(32554): 1.1e-26
Smith-Waterman score: 507; 30.2% identity (61.8% similar) in 351 aa overlap (4-340:4-338)
10 20 30 40 50 60
pF1KE2 MGLGPVFLLLAGIFPFAPPGAAAEPHSLRYNLTVLSWDGSVQSGFLTEVHLDGQPFLRCD
: ..:::. . .. :.. :::.: : .: : . :.. ..: :.: :
CCDS34 MVDGTLLLLLSEALALTQTWAGS--HSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFD
10 20 30 40 50
70 80 90 100 110
pF1KE2 RQKC--RAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIK---DQKE-GLHSLQ
. : :.. : :. :.. ::::::. ... .:..: .. .:.: : :.::
CCDS34 NDAASPRMVPRAPWMEQE-GSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 EIRVCEIHEDNS-TRSSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAMNVRNFLKEDA
.. ::. :. :. ..: :::. .:. : . . :: : : .. . ..::
CCDS34 WMHGCELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWT------AVDTAAQISEQKSNDA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 MKTKTHYHAMHAD-CLQELRRYLKSGV-VLRRTVPPMVNVTRSEASEGNITVTCRASGFY
... : .:. : :.. :..::..: .: . :: ..::. :. . :. : : :::
CCDS34 SEAE-HQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATLRCWALGFY
180 190 200 210 220 230
240 250 260 270 280
pF1KE2 PWNITLSWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSG---
: .:::.:.::: . ..::. .. : :.::.: :.:. . .:::::.::...: :
CCDS34 PAEITLTWQQDGEGHTQDTELV-ETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPE
240 250 260 270 280
290 300 310 320 330 340
pF1KE2 --NHSTHPVPSGKVLVLQSHWQTFHVSAVAAAAIFVIIIFYVRCCKKKTSAAEGPELVSL
. .:. . . .. ...:...:. . .:. .::.:...:
CCDS34 PVTLRWKPASQPTIPIVGIIAGLVLLGSVVSGAVVAAVIW-----RKKSSGGKGGSYSKA
290 300 310 320 330 340
350 360 370 380
pF1KE2 QVLDQHPVGTSDHRDATQLGFQPLMSDLGSTGSTEGT
CCDS34 EWSDSAQGSESHSL
350
>>CCDS34373.1 A gene_id:3105|Hs108|chr6 (365 aa)
initn: 375 init1: 145 opt: 507 Z-score: 592.7 bits: 118.3 E(32554): 1.1e-26
Smith-Waterman score: 507; 31.6% identity (63.6% similar) in 291 aa overlap (6-288:9-289)
10 20 30 40 50
pF1KE2 MGLGPVFLLLAGIFPFAPPGAAAEPHSLRYNLTVLSWDGSVQSGFLTEVHLDGQPFL
..:::.: . .. :.. ::.:: .: .: : . :.. ..: :.
CCDS34 MAVMAPRTLLLLLSGALALTQTWAGS--HSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFV
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 RCDRQKC--RAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIK---DQKE-GLH
: : . : .:.. : :. : . ::.:::.. .... :. :. .. .:.: : :
CCDS34 RFDSDAASQRMEPRAPWIEQE-GPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSH
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 SLQEIRVCEIHEDNS-TRSSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAMNVRNFLK
..: . :.. :. :. .. :::. ... : . . :: : .: .. .
CCDS34 TIQIMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWT------AADMAAQITKRKW
120 130 140 150 160 170
180 190 200 210 220
pF1KE2 EDAMKTKTHYHAMHADCLQELRRYLKSGV-VLRRTVPPMVNVTRSEASEGNITVTCRASG
: : ... . . :.. :::::..: .:.:: :: ...:. :. . :. : : :
CCDS34 EAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALG
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE2 FYPWNITLSWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSGN
::: .:::.:..:: . ..::. .. : :.::.: :.:. . .:::::.::...: :
CCDS34 FYPAEITLTWQRDGEDQTQDTELV-ETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGL
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE2 HSTHPVPSGKVLVLQSHWQTFHVSAVAAAAIFVIIIFYVRCCKKKTSAAEGPELVSLQVL
CCDS34 PKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRKGGSYTQAASS
300 310 320 330 340 350
>>CCDS4668.1 G gene_id:3135|Hs108|chr6 (338 aa)
initn: 314 init1: 136 opt: 488 Z-score: 571.1 bits: 114.2 E(32554): 1.7e-25
Smith-Waterman score: 488; 30.9% identity (65.6% similar) in 291 aa overlap (6-288:9-289)
10 20 30 40 50
pF1KE2 MGLGPVFLLLAGIFPFAPPGAAAEPHSLRYNLTVLSWDGSVQSGFLTEVHLDGQPFL
.::::.: . .. :.. ::.:: ...: : . :.. ..: :.
CCDS46 MVVMAPRTLFLLLSGALTLTETWAGS--HSMRYFSAAVSRPGRGEPRFIAMGYVDDTQFV
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 RCDRQK-C-RAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIK---DQKEGL-H
: : .. : : .:.. :.:. : . :..:::. .... ::.: .. .:.:. :
CCDS46 RFDSDSACPRMEPRAPWVEQE-GPEYWEEETRNTKAHAQTDRMNLQTLRGYYNQSEASSH
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 SLQEIRVCEIHEDNST-RSSQHFYYDGELFLSQNLETEEWTMPQSSRAQTLAMNVRNFLK
.:: . :.. :. :. ... :::. .:. : . . :: ... :: .. :.
CCDS46 TLQWMIGCDLGSDGRLLRGYEQYAYDGKDYLALNEDLRSWTAADTA-AQ---ISKRKCEA
120 130 140 150 160 170
180 190 200 210 220
pF1KE2 EDAMKTKTHYHAMHADCLQELRRYLKSGV-VLRRTVPPMVNVTRSEASEGNITVTCRASG
.. . . : ... :.. :.:::..: .:.:. :: ..::. . . . :. : : :
CCDS46 ANVAEQRRAY--LEGTCVEWLHRYLENGKEMLQRADPPKTHVTHHPVFDYEATLRCWALG
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE2 FYPWNITLSWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSGN
::: .: :.:..:: . ..:.. .. : :.::.: :.:. . .:::::.::...: :
CCDS46 FYPAEIILTWQRDGEDQTQDVELV-ETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGL
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE2 HSTHPVPSGKVLVLQSHWQTFHVSAVAAAAIFVIIIFYVRCCKKKTSAAEGPELVSLQVL
CCDS46 PEPLMLRWKQSSLPTIPIMGIVAGLVVLAAVVTGAAVAAVLWRKKSSD
300 310 320 330
383 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 03:55:28 2016 done: Tue Nov 8 03:55:29 2016
Total Scan time: 2.550 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]