Result of FASTA (omim) for
pFN21AE2547
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2547, 464 aa
1>>>pF1KE2547 464 - 464 aa - 464 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.8193+/-0.000391; mu= 5.5195+/- 0.025
mean_var=335.3087+/-70.696, 0's: 0 Z-trim(122.7): 43 B-trim: 762 in 1/58
Lambda= 0.070041
statistics sampled from 41291 (41336) to 41291 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.779), E-opt: 0.2 (0.485), width: 16
Scan time: 11.320
The best scores are: opt bits E(85289)
XP_005252017 (OMIM: 600712,616580) PREDICTED: hete ( 464) 3189 335.8 1.5e-91
NP_112553 (OMIM: 600712,616580) heterogeneous nucl ( 464) 3189 335.8 1.5e-91
NP_002131 (OMIM: 600712,616580) heterogeneous nucl ( 464) 3189 335.8 1.5e-91
NP_112552 (OMIM: 600712,616580) heterogeneous nucl ( 463) 3150 331.9 2.3e-90
NP_001305117 (OMIM: 600712,616580) heterogeneous n ( 463) 3150 331.9 2.3e-90
XP_016870157 (OMIM: 600712,616580) PREDICTED: hete ( 463) 3150 331.9 2.3e-90
XP_005252022 (OMIM: 600712,616580) PREDICTED: hete ( 440) 2340 250.0 9.7e-66
NP_001305116 (OMIM: 600712,616580) heterogeneous n ( 440) 2340 250.0 9.7e-66
XP_005252020 (OMIM: 600712,616580) PREDICTED: hete ( 440) 2340 250.0 9.7e-66
XP_016870158 (OMIM: 600712,616580) PREDICTED: hete ( 439) 2301 246.0 1.5e-64
XP_011516918 (OMIM: 600712,616580) PREDICTED: hete ( 439) 2301 246.0 1.5e-64
NP_001305115 (OMIM: 600712,616580) heterogeneous n ( 439) 2301 246.0 1.5e-64
NP_001122385 (OMIM: 601210) poly(rC)-binding prote ( 335) 283 42.0 0.0031
>>XP_005252017 (OMIM: 600712,616580) PREDICTED: heteroge (464 aa)
initn: 3189 init1: 3189 opt: 3189 Z-score: 1764.6 bits: 335.8 E(85289): 1.5e-91
Smith-Waterman score: 3189; 100.0% identity (100.0% similar) in 464 aa overlap (1-464:1-464)
10 20 30 40 50 60
pF1KE2 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTAT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
370 380 390 400 410 420
430 440 450 460
pF1KE2 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
::::::::::::::::::::::::::::::::::::::::::::
XP_005 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
430 440 450 460
>>NP_112553 (OMIM: 600712,616580) heterogeneous nuclear (464 aa)
initn: 3189 init1: 3189 opt: 3189 Z-score: 1764.6 bits: 335.8 E(85289): 1.5e-91
Smith-Waterman score: 3189; 100.0% identity (100.0% similar) in 464 aa overlap (1-464:1-464)
10 20 30 40 50 60
pF1KE2 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTAT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 SQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
370 380 390 400 410 420
430 440 450 460
pF1KE2 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
::::::::::::::::::::::::::::::::::::::::::::
NP_112 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
430 440 450 460
>>NP_002131 (OMIM: 600712,616580) heterogeneous nuclear (464 aa)
initn: 3189 init1: 3189 opt: 3189 Z-score: 1764.6 bits: 335.8 E(85289): 1.5e-91
Smith-Waterman score: 3189; 100.0% identity (100.0% similar) in 464 aa overlap (1-464:1-464)
10 20 30 40 50 60
pF1KE2 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTAT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
370 380 390 400 410 420
430 440 450 460
pF1KE2 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
::::::::::::::::::::::::::::::::::::::::::::
NP_002 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
430 440 450 460
>>NP_112552 (OMIM: 600712,616580) heterogeneous nuclear (463 aa)
initn: 3228 init1: 3150 opt: 3150 Z-score: 1743.3 bits: 331.9 E(85289): 2.3e-90
Smith-Waterman score: 3150; 99.8% identity (100.0% similar) in 459 aa overlap (1-459:1-459)
10 20 30 40 50 60
pF1KE2 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTAT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 SQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
370 380 390 400 410 420
430 440 450 460
pF1KE2 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
::::::::::::::::::::::::::::::::::::::.
NP_112 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYSGKFF
430 440 450 460
>>NP_001305117 (OMIM: 600712,616580) heterogeneous nucle (463 aa)
initn: 3228 init1: 3150 opt: 3150 Z-score: 1743.3 bits: 331.9 E(85289): 2.3e-90
Smith-Waterman score: 3150; 99.8% identity (100.0% similar) in 459 aa overlap (1-459:1-459)
10 20 30 40 50 60
pF1KE2 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTAT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
370 380 390 400 410 420
430 440 450 460
pF1KE2 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
::::::::::::::::::::::::::::::::::::::.
NP_001 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYSGKFF
430 440 450 460
>>XP_016870157 (OMIM: 600712,616580) PREDICTED: heteroge (463 aa)
initn: 3228 init1: 3150 opt: 3150 Z-score: 1743.3 bits: 331.9 E(85289): 2.3e-90
Smith-Waterman score: 3150; 99.8% identity (100.0% similar) in 459 aa overlap (1-459:1-459)
10 20 30 40 50 60
pF1KE2 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTAT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
370 380 390 400 410 420
430 440 450 460
pF1KE2 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
::::::::::::::::::::::::::::::::::::::.
XP_016 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYSGKFF
430 440 450 460
>>XP_005252022 (OMIM: 600712,616580) PREDICTED: heteroge (440 aa)
initn: 3018 init1: 2340 opt: 2340 Z-score: 1301.2 bits: 250.0 E(85289): 9.7e-66
Smith-Waterman score: 2974; 94.8% identity (94.8% similar) in 464 aa overlap (1-464:1-440)
10 20 30 40 50 60
pF1KE2 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTAT
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEE----------
70 80 90 100 110
130 140 150 160 170 180
pF1KE2 SQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
::::::::::::::::::::::::::::::::::::::::::::::
XP_005 --------------YQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
120 130 140 150
190 200 210 220 230 240
pF1KE2 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE2 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE2 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE2 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
340 350 360 370 380 390
430 440 450 460
pF1KE2 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
::::::::::::::::::::::::::::::::::::::::::::
XP_005 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
400 410 420 430 440
>>NP_001305116 (OMIM: 600712,616580) heterogeneous nucle (440 aa)
initn: 3018 init1: 2340 opt: 2340 Z-score: 1301.2 bits: 250.0 E(85289): 9.7e-66
Smith-Waterman score: 2974; 94.8% identity (94.8% similar) in 464 aa overlap (1-464:1-440)
10 20 30 40 50 60
pF1KE2 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTAT
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEE----------
70 80 90 100 110
130 140 150 160 170 180
pF1KE2 SQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 --------------YQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
120 130 140 150
190 200 210 220 230 240
pF1KE2 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE2 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE2 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE2 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
340 350 360 370 380 390
430 440 450 460
pF1KE2 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
400 410 420 430 440
>>XP_005252020 (OMIM: 600712,616580) PREDICTED: heteroge (440 aa)
initn: 3018 init1: 2340 opt: 2340 Z-score: 1301.2 bits: 250.0 E(85289): 9.7e-66
Smith-Waterman score: 2974; 94.8% identity (94.8% similar) in 464 aa overlap (1-464:1-440)
10 20 30 40 50 60
pF1KE2 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTAT
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEE----------
70 80 90 100 110
130 140 150 160 170 180
pF1KE2 SQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
::::::::::::::::::::::::::::::::::::::::::::::
XP_005 --------------YQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
120 130 140 150
190 200 210 220 230 240
pF1KE2 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE2 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE2 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE2 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
340 350 360 370 380 390
430 440 450 460
pF1KE2 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
::::::::::::::::::::::::::::::::::::::::::::
XP_005 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
400 410 420 430 440
>>XP_016870158 (OMIM: 600712,616580) PREDICTED: heteroge (439 aa)
initn: 3057 init1: 2301 opt: 2301 Z-score: 1279.9 bits: 246.0 E(85289): 1.5e-64
Smith-Waterman score: 2935; 94.6% identity (94.8% similar) in 459 aa overlap (1-459:1-435)
10 20 30 40 50 60
pF1KE2 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTAT
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEE----------
70 80 90 100 110
130 140 150 160 170 180
pF1KE2 SQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 --------------YQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL
120 130 140 150
190 200 210 220 230 240
pF1KE2 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFT
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE2 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRG
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE2 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMA
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE2 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGAS
340 350 360 370 380 390
430 440 450 460
pF1KE2 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
::::::::::::::::::::::::::::::::::::::.
XP_016 IKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYSGKFF
400 410 420 430
464 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 03:53:30 2016 done: Tue Nov 8 03:53:31 2016
Total Scan time: 11.320 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]