Result of FASTA (ccds) for
pFN21AE2512
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2512, 288 aa
1>>>pF1KE2512 288 - 288 aa - 288 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.2845+/-0.00112; mu= -9.3023+/- 0.068
mean_var=405.4886+/-81.383, 0's: 0 Z-trim(113.2): 58 B-trim: 12 in 1/54
Lambda= 0.063692
statistics sampled from 13863 (13903) to 13863 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.723), E-opt: 0.2 (0.427), width: 16
Scan time: 2.080
The best scores are: opt bits E(32554)
CCDS30969.1 TNNT2 gene_id:7139|Hs108|chr1 ( 288) 1844 182.8 2.5e-46
CCDS30968.1 TNNT2 gene_id:7139|Hs108|chr1 ( 285) 1809 179.6 2.3e-45
CCDS73002.1 TNNT2 gene_id:7139|Hs108|chr1 ( 282) 1778 176.8 1.6e-44
CCDS73003.1 TNNT2 gene_id:7139|Hs108|chr1 ( 298) 1735 172.8 2.6e-43
CCDS46185.1 TNNT1 gene_id:7138|Hs108|chr19 ( 251) 1039 108.8 4.2e-24
CCDS59421.1 TNNT1 gene_id:7138|Hs108|chr19 ( 262) 1039 108.8 4.3e-24
CCDS60390.1 TNNT2 gene_id:7139|Hs108|chr1 ( 255) 1032 108.2 6.6e-24
CCDS41594.1 TNNT3 gene_id:7140|Hs108|chr11 ( 256) 986 103.9 1.2e-22
CCDS7727.1 TNNT3 gene_id:7140|Hs108|chr11 ( 258) 983 103.7 1.5e-22
CCDS41596.1 TNNT3 gene_id:7140|Hs108|chr11 ( 250) 980 103.4 1.8e-22
CCDS41595.1 TNNT3 gene_id:7140|Hs108|chr11 ( 250) 954 101.0 9.3e-22
CCDS12917.1 TNNT1 gene_id:7138|Hs108|chr19 ( 278) 817 88.4 6.2e-18
>>CCDS30969.1 TNNT2 gene_id:7139|Hs108|chr1 (288 aa)
initn: 1844 init1: 1844 opt: 1844 Z-score: 945.3 bits: 182.8 E(32554): 2.5e-46
Smith-Waterman score: 1844; 100.0% identity (100.0% similar) in 288 aa overlap (1-288:1-288)
10 20 30 40 50 60
pF1KE2 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 EESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 EESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 VSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 VSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 MMHFGGYIQKQAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MMHFGGYIQKQAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSI
190 200 210 220 230 240
250 260 270 280
pF1KE2 YNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 YNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
250 260 270 280
>>CCDS30968.1 TNNT2 gene_id:7139|Hs108|chr1 (285 aa)
initn: 1217 init1: 1217 opt: 1809 Z-score: 927.9 bits: 179.6 E(32554): 2.3e-45
Smith-Waterman score: 1809; 99.0% identity (99.0% similar) in 288 aa overlap (1-288:1-285)
10 20 30 40 50 60
pF1KE2 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 EESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 EESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 VSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 VSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 MMHFGGYIQKQAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSI
:::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MMHFGGYIQK---TERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSI
190 200 210 220 230
250 260 270 280
pF1KE2 YNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 YNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
240 250 260 270 280
>>CCDS73002.1 TNNT2 gene_id:7139|Hs108|chr1 (282 aa)
initn: 1283 init1: 1134 opt: 1778 Z-score: 912.6 bits: 176.8 E(32554): 1.6e-44
Smith-Waterman score: 1778; 97.9% identity (97.9% similar) in 288 aa overlap (1-288:1-282)
10 20 30 40 50 60
pF1KE2 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
:::::::::::::::::: :::::::::::::::::::::::::::::::::::::
CCDS73 MSDIEEVVEEYEEEEQEE-----QEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 EESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEEL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 VSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSN
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 MMHFGGYIQKQAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSI
:::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MMHFGGYIQK-AQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSI
180 190 200 210 220 230
250 260 270 280
pF1KE2 YNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 YNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
240 250 260 270 280
>>CCDS73003.1 TNNT2 gene_id:7139|Hs108|chr1 (298 aa)
initn: 1730 init1: 1730 opt: 1735 Z-score: 890.9 bits: 172.8 E(32554): 2.6e-43
Smith-Waterman score: 1814; 96.6% identity (96.6% similar) in 298 aa overlap (1-288:1-298)
10 20 30 40 50
pF1KE2 MSDIEEVVEEYEEEEQEEAAVEE----------QEEAAEEDAEAEAETEETRAEEDEEEE
::::::::::::::::::::::: :::::::::::::::::::::::::::
CCDS73 MSDIEEVVEEYEEEEQEEAAVEEEEDWREDEDEQEEAAEEDAEAEAETEETRAEEDEEEE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 EAKEAEDGPMEESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EAKEAEDGPMEESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE2 ENRKKEEEELVSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ENRKKEEEELVSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAED
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE2 EARKKKALSNMMHFGGYIQKQAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EARKKKALSNMMHFGGYIQKQAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLR
190 200 210 220 230 240
240 250 260 270 280
pF1KE2 EKAKELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EKAKELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
250 260 270 280 290
>>CCDS46185.1 TNNT1 gene_id:7138|Hs108|chr19 (251 aa)
initn: 749 init1: 612 opt: 1039 Z-score: 546.3 bits: 108.8 E(32554): 4.2e-24
Smith-Waterman score: 1039; 64.7% identity (84.3% similar) in 255 aa overlap (36-288:2-251)
10 20 30 40 50 60
pF1KE2 EVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPMEESKP
..::: . ::.. :::: : :. :: .:
CCDS46 MSDTEEQEYEEEQPEEEAAEEEE--EEEERP
10 20
70 80 90 100 110 120
pF1KE2 KP-RSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEELVSLK
:: : .: :.:::::.:::::::::::::::::: :::.::..:::.:::::::::.::
CCDS46 KPSRPVVPPLIPPKIPEGERVDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALK
30 40 50 60 70 80
130 140 150 160 170 180
pF1KE2 DRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSNM-MH
.::::::.:::::::.:.:.:.::: .::::. :.:::: ...:::.:.:::.:::: :
CCDS46 ERIERRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAH
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE2 FGGYIQKQAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYNL
::::. : .:.: ::::: :: : .::.::.: : ::...:.::::::.:: . :..:
CCDS46 FGGYLVK---AEQKRGKRQTGREMKVRILSERKKPLDIDYMGEEQLREKAQELSDWIHQL
150 160 170 180 190 200
250 260 270 280
pF1KE2 EAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
:.:::::. :.:::::::::: :::. :: : ::..: ::::
CCDS46 ESEKFDLMAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
210 220 230 240 250
>>CCDS59421.1 TNNT1 gene_id:7138|Hs108|chr19 (262 aa)
initn: 758 init1: 645 opt: 1039 Z-score: 546.0 bits: 108.8 E(32554): 4.3e-24
Smith-Waterman score: 1047; 61.4% identity (77.6% similar) in 290 aa overlap (1-288:1-262)
10 20 30 40 50 60
pF1KE2 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
::: :: .:::::. :: :.::.::: :: : :: :: :
CCDS59 MSDTEE--QEYEEEQPEEEAAEEEEEAPEEP-EPVAEPEEER------------------
10 20 30
70 80 90 100 110
pF1KE2 EESKPKP-RSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEE
::: : .: :.:::::.:::::::::::::::::: :::.::..:::.:::::::
CCDS59 ----PKPSRPVVPPLIPPKIPEGERVDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEE
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE2 LVSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALS
::.::.::::::.:::::::.:.:.:.::: .::::. :.:::: ...:::.:.:::.::
CCDS59 LVALKERIERRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLS
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE2 NM-MHFGGYIQKQAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQ
:: :::::. : .:.: ::::: :: : .::.::.: : ::...:.::::::.:: .
CCDS59 NMGAHFGGYLVK---AEQKRGKRQTGREMKVRILSERKKPLDIDYMGEEQLREKAQELSD
160 170 180 190 200 210
240 250 260 270 280
pF1KE2 SIYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
:..::.:::::. :.:::::::::: :::. :: : ::..: ::::
CCDS59 WIHQLESEKFDLMAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
220 230 240 250 260
>>CCDS60390.1 TNNT2 gene_id:7139|Hs108|chr1 (255 aa)
initn: 1128 init1: 610 opt: 1032 Z-score: 542.7 bits: 108.2 E(32554): 6.6e-24
Smith-Waterman score: 1427; 82.2% identity (82.2% similar) in 298 aa overlap (1-288:1-255)
10 20 30 40 50
pF1KE2 MSDIEEVVEEYEEEEQEEAAVEE----------QEEAAEEDAEAEAETEETRAEEDEEEE
::::::::::::::::::::::: ::::::::::::::::::::: :::::
CCDS60 MSDIEEVVEEYEEEEQEEAAVEEEEDWREDEDEQEEAAEEDAEAEAETEETRAE-DEEEE
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 EAKEAEDGPMEESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHF
::::::::::::::::::::::::::::::::::::::
CCDS60 EAKEAEDGPMEESKPKPRSFMPNLVPPKIPDGERVDFD----------------------
60 70 80 90
120 130 140 150 160 170
pF1KE2 ENRKKEEEELVSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAED
:::::::::::::::::::::::::::::::::::::::::::
CCDS60 -----------------ERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAED
100 110 120 130 140
180 190 200 210 220 230
pF1KE2 EARKKKALSNMMHFGGYIQKQAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLR
:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::
CCDS60 EARKKKALSNMMHFGGYIQK---TERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLR
150 160 170 180 190
240 250 260 270 280
pF1KE2 EKAKELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 EKAKELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
200 210 220 230 240 250
>>CCDS41594.1 TNNT3 gene_id:7140|Hs108|chr11 (256 aa)
initn: 957 init1: 599 opt: 986 Z-score: 519.8 bits: 103.9 E(32554): 1.2e-22
Smith-Waterman score: 986; 60.7% identity (84.7% similar) in 262 aa overlap (31-288:3-256)
10 20 30 40 50 60
pF1KE2 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
: :.: ..:: ::.: .::: :... .
CCDS41 MSDEEVE-QVEEQYEEEEEAQEEAAEVHE-EV
10 20 30
70 80 90 100 110 120
pF1KE2 EESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEEL
.: . ::: :.:. ::::.::.::::::..::..::: ::::::..::: ::::::::
CCDS41 HEPEEKPR---PKLTAPKIPEGEKVDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEEL
40 50 60 70 80
130 140 150 160 170 180
pF1KE2 VSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSN
:.::.:::.:::::::::::: :.:.:::::::::.::::::. .:.:::. .::::::.
CCDS41 VALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSS
90 100 110 120 130 140
190 200 210 220 230
pF1KE2 M-MHFGGYIQKQAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQS
: ....:. :....: ::.:: :: :::::::::: : ::::.::.::.::::::..
CCDS41 MGANYSSYL---AKADQKRGKKQTAREMKKKILAERRKPLNIDHLGEDKLRDKAKELWET
150 160 170 180 190 200
240 250 260 270 280
pF1KE2 IYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRG---KAKVTGRWK
...:: .::.. ::.:.:::.:..::.::.. :: :: : :.:: ::::
CCDS41 LHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGTPAKGKVGGRWK
210 220 230 240 250
>>CCDS7727.1 TNNT3 gene_id:7140|Hs108|chr11 (258 aa)
initn: 942 init1: 581 opt: 983 Z-score: 518.3 bits: 103.7 E(32554): 1.5e-22
Smith-Waterman score: 990; 59.4% identity (79.4% similar) in 281 aa overlap (12-288:4-258)
10 20 30 40 50 60
pF1KE2 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
:: :: : ::.::: ::. :..: :::: :::
CCDS77 MSDEEVEQVEEQYEEEEEAQEEE-----EVQEDTAEEDAEEE----------
10 20 30
70 80 90 100 110 120
pF1KE2 EESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEEL
::: :.:. ::::.::.::::::..::..::: ::::::..::: ::::::::
CCDS77 -----KPR---PKLTAPKIPEGEKVDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEEL
40 50 60 70 80
130 140 150 160 170 180
pF1KE2 VSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSN
:.::.:::.:::::::::::: :.:.:::::::::.::::::. .:.:::. .::::::.
CCDS77 VALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSS
90 100 110 120 130 140
190 200 210 220 230
pF1KE2 M-MHFGGYIQKQAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQS
: ....:. :....: ::.:: :: :::::::::: : ::::.::.::.::::::..
CCDS77 MGANYSSYL---AKADQKRGKKQTAREMKKKILAERRKPLNIDHLGEDKLRDKAKELWET
150 160 170 180 190 200
240 250 260 270 280
pF1KE2 IYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRG---KAKVTGRWK
...:: .::.. ::.:.:::.:..::.::.. :: :: : :.:: ::::
CCDS77 LHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGTPAKGKVGGRWK
210 220 230 240 250
>>CCDS41596.1 TNNT3 gene_id:7140|Hs108|chr11 (250 aa)
initn: 947 init1: 589 opt: 980 Z-score: 517.0 bits: 103.4 E(32554): 1.8e-22
Smith-Waterman score: 980; 61.0% identity (85.3% similar) in 259 aa overlap (34-288:2-250)
10 20 30 40 50 60
pF1KE2 IEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPMEES
.. :.:... :. ::::::.: :. .::
CCDS41 MSDEEVEQVE-EQYEEEEEAQEEEE-VQEEE
10 20
70 80 90 100 110 120
pF1KE2 KPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEELVSL
::.:. :. ::::.::.::::::..::..::: ::::::..::: :::::::::.:
CCDS41 KPRPK-----LTAPKIPEGEKVDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELVAL
30 40 50 60 70 80
130 140 150 160 170 180
pF1KE2 KDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSNM-M
:.:::.:::::::::::: :.:.:::::::::.::::::. .:.:::. .::::::.:
CCDS41 KERIEKRRAERAEQQRIRAEKERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGA
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE2 HFGGYIQKQAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYN
....:. :....: ::.:: :: :::::::::: : ::::.::.::.::::::.....
CCDS41 NYSSYL---AKADQKRGKKQTAREMKKKILAERRKPLNIDHLGEDKLRDKAKELWETLHQ
150 160 170 180 190 200
250 260 270 280
pF1KE2 LEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRG---KAKVTGRWK
:: .::.. ::.:.:::.:..::.::.. :: :: : :.:: ::::
CCDS41 LEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGTPAKGKVGGRWK
210 220 230 240 250
288 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 02:48:06 2016 done: Tue Nov 8 02:48:06 2016
Total Scan time: 2.080 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]