Result of FASTA (ccds) for
pFN21AE2382
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2382, 1328 aa
1>>>pF1KE2382 1328 - 1328 aa - 1328 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.3424+/-0.00115; mu= 0.8131+/- 0.069
mean_var=259.5417+/-51.373, 0's: 0 Z-trim(110.9): 6 B-trim: 7 in 1/51
Lambda= 0.079611
statistics sampled from 11972 (11974) to 11972 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.693), E-opt: 0.2 (0.368), width: 16
Scan time: 6.400
The best scores are: opt bits E(32554)
CCDS11046.1 MYBBP1A gene_id:10514|Hs108|chr17 (1328) 8677 1011.0 0
CCDS42238.1 MYBBP1A gene_id:10514|Hs108|chr17 (1332) 8630 1005.6 0
>>CCDS11046.1 MYBBP1A gene_id:10514|Hs108|chr17 (1328 aa)
initn: 8677 init1: 8677 opt: 8677 Z-score: 5397.1 bits: 1011.0 E(32554): 0
Smith-Waterman score: 8677; 100.0% identity (100.0% similar) in 1328 aa overlap (1-1328:1-1328)
10 20 30 40 50 60
pF1KE2 MESRDPAQPMSPGEATQSGARPADRYGLLKHSREFLDFFWDIAKPEQETRLAATEKLLEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MESRDPAQPMSPGEATQSGARPADRYGLLKHSREFLDFFWDIAKPEQETRLAATEKLLEY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 LRGRPKGSEMKYALKRLITGLGVGRETARPCYSLALAQLLQSFEDLPLCSILQQIQEKYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LRGRPKGSEMKYALKRLITGLGVGRETARPCYSLALAQLLQSFEDLPLCSILQQIQEKYD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 LHQVKKAMLRPALFANLFGVLALFQSGRLVKDQEALMKSVKLLQALAQYQNHLQEQPRKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LHQVKKAMLRPALFANLFGVLALFQSGRLVKDQEALMKSVKLLQALAQYQNHLQEQPRKA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 LVDILSEVSKATLQEILPEVLKADLNIILSSPEQLELFLLAQQKVPSKLKKLVGSVNLFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LVDILSEVSKATLQEILPEVLKADLNIILSSPEQLELFLLAQQKVPSKLKKLVGSVNLFS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 DENVPRLVNVLKMAASSVKKDRKLPAIALDLLRLALKEDKFPRFWKEVVEQGLLKMQFWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DENVPRLVNVLKMAASSVKKDRKLPAIALDLLRLALKEDKFPRFWKEVVEQGLLKMQFWP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 ASYLCFRLLGAALPLLTKEQLHLVMQGDVIRHYGEHVCTAKLPKQFKFAPEMDDYVGTFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ASYLCFRLLGAALPLLTKEQLHLVMQGDVIRHYGEHVCTAKLPKQFKFAPEMDDYVGTFL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 EGCQDDPERQLAVLVAFSSVTNQGLPVTPTFWRVVRFLSPPALQGYVAWLRAMFLQPDLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 EGCQDDPERQLAVLVAFSSVTNQGLPVTPTFWRVVRFLSPPALQGYVAWLRAMFLQPDLD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 SLVDFSTNNQKKAQDSSLHMPERAVFRLRKWIIFRLVSIVDSLHLEMEEALTEQVARFCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SLVDFSTNNQKKAQDSSLHMPERAVFRLRKWIIFRLVSIVDSLHLEMEEALTEQVARFCL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 FHSFFVTKKPTSQIPETKHPFSFPLENQAREAVSSAFFSLLQTLSTQFKQAPGQTQGGQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FHSFFVTKKPTSQIPETKHPFSFPLENQAREAVSSAFFSLLQTLSTQFKQAPGQTQGGQP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 WTYHLVQFADLLLNHSHNVTTVTPFTAQQRQAWDRMLQTLKELEAHSAEARAAAFQHLLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 WTYHLVQFADLLLNHSHNVTTVTPFTAQQRQAWDRMLQTLKELEAHSAEARAAAFQHLLL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 LVGIHLLKSPAESCDLLGDIQTCIRKSLGEKPRRSRTKTIDPQEPPWVEVLVEILLALLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LVGIHLLKSPAESCDLLGDIQTCIRKSLGEKPRRSRTKTIDPQEPPWVEVLVEILLALLA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 QPSHLMRQVARSVFGHICSHLTPRALQLILDVLNPETSEDENDRVVVTDDSDERRLKGAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QPSHLMRQVARSVFGHICSHLTPRALQLILDVLNPETSEDENDRVVVTDDSDERRLKGAE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE2 DKSEEGEDNRSSESEEESEGEESEEEERDGDVDQGFREQLMTVLQAGKALGGEDSENEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DKSEEGEDNRSSESEEESEGEESEEEERDGDVDQGFREQLMTVLQAGKALGGEDSENEEE
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE2 LGDEAMMALDQSLASLFAEQKLRIQARRDEKNKLQKEKALRRDFQIRVLDLVEVLVTKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LGDEAMMALDQSLASLFAEQKLRIQARRDEKNKLQKEKALRRDFQIRVLDLVEVLVTKQP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE2 ENALVLELLEPLLSIIRRSLRSSSSKQEQDLLHKTARIFTHHLCRARRYCHDLGERAGAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ENALVLELLEPLLSIIRRSLRSSSSKQEQDLLHKTARIFTHHLCRARRYCHDLGERAGAL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE2 HAQVERLVQQAGRQPDSPTALYHFNASLYLLRVLKGNTAEGCVHETQEKQKAGTDPSHMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 HAQVERLVQQAGRQPDSPTALYHFNASLYLLRVLKGNTAEGCVHETQEKQKAGTDPSHMP
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE2 TGPQAASCLDLNLVTRVYSTALSSFLTKRNSPLTVPMFLSLFSRHPVLCQSLLPILVQHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TGPQAASCLDLNLVTRVYSTALSSFLTKRNSPLTVPMFLSLFSRHPVLCQSLLPILVQHI
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE2 TGPVRPRHQACLLLQKTLSMREVRSCFEDPEWKQLMGQVLAKVTENLRVLGEAQTKAQHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TGPVRPRHQACLLLQKTLSMREVRSCFEDPEWKQLMGQVLAKVTENLRVLGEAQTKAQHQ
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE2 QALSSLELLNVLFRTCKHEKLTLDLTVLLGVLQGQQQSLQQGAHSTGSSRLHDLYWQAMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QALSSLELLNVLFRTCKHEKLTLDLTVLLGVLQGQQQSLQQGAHSTGSSRLHDLYWQAMK
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE2 TLGVQRPKLEKKDAKEIPSATQSPISKKRKKKGFLPETKKRKKRKSEDGTPAEDGTPAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TLGVQRPKLEKKDAKEIPSATQSPISKKRKKKGFLPETKKRKKRKSEDGTPAEDGTPAAT
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE2 GGSQPPSMGRKKRNRTKAKVPAQANGTPTTKSPAPGAPTRSPSTPAKSPKLQKKNQKPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GGSQPPSMGRKKRNRTKAKVPAQANGTPTTKSPAPGAPTRSPSTPAKSPKLQKKNQKPSQ
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE2 VNGAPGSPTEPAGQKQHQKALPKKGVLGKSPLSALARKKARLSLVIRSPSLLQSGAKKKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VNGAPGSPTEPAGQKQHQKALPKKGVLGKSPLSALARKKARLSLVIRSPSLLQSGAKKKA
1270 1280 1290 1300 1310 1320
pF1KE2 QVRKAGKP
::::::::
CCDS11 QVRKAGKP
>>CCDS42238.1 MYBBP1A gene_id:10514|Hs108|chr17 (1332 aa)
initn: 8630 init1: 8630 opt: 8630 Z-score: 5367.9 bits: 1005.6 E(32554): 0
Smith-Waterman score: 8630; 100.0% identity (100.0% similar) in 1321 aa overlap (1-1321:1-1321)
10 20 30 40 50 60
pF1KE2 MESRDPAQPMSPGEATQSGARPADRYGLLKHSREFLDFFWDIAKPEQETRLAATEKLLEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MESRDPAQPMSPGEATQSGARPADRYGLLKHSREFLDFFWDIAKPEQETRLAATEKLLEY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 LRGRPKGSEMKYALKRLITGLGVGRETARPCYSLALAQLLQSFEDLPLCSILQQIQEKYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LRGRPKGSEMKYALKRLITGLGVGRETARPCYSLALAQLLQSFEDLPLCSILQQIQEKYD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 LHQVKKAMLRPALFANLFGVLALFQSGRLVKDQEALMKSVKLLQALAQYQNHLQEQPRKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LHQVKKAMLRPALFANLFGVLALFQSGRLVKDQEALMKSVKLLQALAQYQNHLQEQPRKA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 LVDILSEVSKATLQEILPEVLKADLNIILSSPEQLELFLLAQQKVPSKLKKLVGSVNLFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LVDILSEVSKATLQEILPEVLKADLNIILSSPEQLELFLLAQQKVPSKLKKLVGSVNLFS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 DENVPRLVNVLKMAASSVKKDRKLPAIALDLLRLALKEDKFPRFWKEVVEQGLLKMQFWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 DENVPRLVNVLKMAASSVKKDRKLPAIALDLLRLALKEDKFPRFWKEVVEQGLLKMQFWP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 ASYLCFRLLGAALPLLTKEQLHLVMQGDVIRHYGEHVCTAKLPKQFKFAPEMDDYVGTFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ASYLCFRLLGAALPLLTKEQLHLVMQGDVIRHYGEHVCTAKLPKQFKFAPEMDDYVGTFL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 EGCQDDPERQLAVLVAFSSVTNQGLPVTPTFWRVVRFLSPPALQGYVAWLRAMFLQPDLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EGCQDDPERQLAVLVAFSSVTNQGLPVTPTFWRVVRFLSPPALQGYVAWLRAMFLQPDLD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 SLVDFSTNNQKKAQDSSLHMPERAVFRLRKWIIFRLVSIVDSLHLEMEEALTEQVARFCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SLVDFSTNNQKKAQDSSLHMPERAVFRLRKWIIFRLVSIVDSLHLEMEEALTEQVARFCL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 FHSFFVTKKPTSQIPETKHPFSFPLENQAREAVSSAFFSLLQTLSTQFKQAPGQTQGGQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FHSFFVTKKPTSQIPETKHPFSFPLENQAREAVSSAFFSLLQTLSTQFKQAPGQTQGGQP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 WTYHLVQFADLLLNHSHNVTTVTPFTAQQRQAWDRMLQTLKELEAHSAEARAAAFQHLLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 WTYHLVQFADLLLNHSHNVTTVTPFTAQQRQAWDRMLQTLKELEAHSAEARAAAFQHLLL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 LVGIHLLKSPAESCDLLGDIQTCIRKSLGEKPRRSRTKTIDPQEPPWVEVLVEILLALLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LVGIHLLKSPAESCDLLGDIQTCIRKSLGEKPRRSRTKTIDPQEPPWVEVLVEILLALLA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 QPSHLMRQVARSVFGHICSHLTPRALQLILDVLNPETSEDENDRVVVTDDSDERRLKGAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QPSHLMRQVARSVFGHICSHLTPRALQLILDVLNPETSEDENDRVVVTDDSDERRLKGAE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE2 DKSEEGEDNRSSESEEESEGEESEEEERDGDVDQGFREQLMTVLQAGKALGGEDSENEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 DKSEEGEDNRSSESEEESEGEESEEEERDGDVDQGFREQLMTVLQAGKALGGEDSENEEE
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE2 LGDEAMMALDQSLASLFAEQKLRIQARRDEKNKLQKEKALRRDFQIRVLDLVEVLVTKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LGDEAMMALDQSLASLFAEQKLRIQARRDEKNKLQKEKALRRDFQIRVLDLVEVLVTKQP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE2 ENALVLELLEPLLSIIRRSLRSSSSKQEQDLLHKTARIFTHHLCRARRYCHDLGERAGAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ENALVLELLEPLLSIIRRSLRSSSSKQEQDLLHKTARIFTHHLCRARRYCHDLGERAGAL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE2 HAQVERLVQQAGRQPDSPTALYHFNASLYLLRVLKGNTAEGCVHETQEKQKAGTDPSHMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 HAQVERLVQQAGRQPDSPTALYHFNASLYLLRVLKGNTAEGCVHETQEKQKAGTDPSHMP
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE2 TGPQAASCLDLNLVTRVYSTALSSFLTKRNSPLTVPMFLSLFSRHPVLCQSLLPILVQHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TGPQAASCLDLNLVTRVYSTALSSFLTKRNSPLTVPMFLSLFSRHPVLCQSLLPILVQHI
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE2 TGPVRPRHQACLLLQKTLSMREVRSCFEDPEWKQLMGQVLAKVTENLRVLGEAQTKAQHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TGPVRPRHQACLLLQKTLSMREVRSCFEDPEWKQLMGQVLAKVTENLRVLGEAQTKAQHQ
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE2 QALSSLELLNVLFRTCKHEKLTLDLTVLLGVLQGQQQSLQQGAHSTGSSRLHDLYWQAMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QALSSLELLNVLFRTCKHEKLTLDLTVLLGVLQGQQQSLQQGAHSTGSSRLHDLYWQAMK
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE2 TLGVQRPKLEKKDAKEIPSATQSPISKKRKKKGFLPETKKRKKRKSEDGTPAEDGTPAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TLGVQRPKLEKKDAKEIPSATQSPISKKRKKKGFLPETKKRKKRKSEDGTPAEDGTPAAT
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE2 GGSQPPSMGRKKRNRTKAKVPAQANGTPTTKSPAPGAPTRSPSTPAKSPKLQKKNQKPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GGSQPPSMGRKKRNRTKAKVPAQANGTPTTKSPAPGAPTRSPSTPAKSPKLQKKNQKPSQ
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE2 VNGAPGSPTEPAGQKQHQKALPKKGVLGKSPLSALARKKARLSLVIRSPSLLQSGAKKKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 VNGAPGSPTEPAGQKQHQKALPKKGVLGKSPLSALARKKARLSLVIRSPSLLQSGAKKKA
1270 1280 1290 1300 1310 1320
pF1KE2 QVRKAGKP
:
CCDS42 QTLRFTISSSKK
1330
1328 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 14:00:15 2016 done: Sun Nov 6 14:00:16 2016
Total Scan time: 6.400 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]