FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2372, 657 aa
  1>>>pF1KE2372 657 - 657 aa - 657 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 11.6840+/-0.00131; mu= -9.2868+/- 0.077
 mean_var=469.9241+/-99.634, 0's: 0 Z-trim(108.9): 98  B-trim: 0 in 0/54
 Lambda= 0.059164
 statistics sampled from 10485 (10526) to 10485 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.663), E-opt: 0.2 (0.323), width:  16
 Scan time:  3.950

The best scores are:                                      opt bits E(32554)
CCDS764.1 SASS6 gene_id:163786|Hs108|chr1          ( 657) 4194 373.5 5.2e-103


>>CCDS764.1 SASS6 gene_id:163786|Hs108|chr1               (657 aa)
 initn: 4194 init1: 4194 opt: 4194  Z-score: 1962.8  bits: 373.5 E(32554): 5.2e-103
Smith-Waterman score: 4194; 99.8% identity (100.0% similar) in 657 aa overlap (1-657:1-657)

               10        20        30        40        50        60
pF1KE2 MSQVLFHQLVPLQVKCKDCEERRVSIRMSIELQSVSNPVHRKDLVIRLTDDTDPFFLYNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MSQVLFHQLVPLQVKCKDCEERRVSIRMSIELQSVSNPVHRKDLVIRLTDDTDPFFLYNL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 VISEEDFQSLKFQQGLLVDFLAFPQKFIDLLQQCTQEHAKEIPRFLLQLVSPAAILDNSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 VISEEDFQSLKFQQGLLVDFLAFPQKFIDLLQQCTQEHAKEIPRFLLQLVSPAAILDNSP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 AFLNVVETNPFKHLTHLSLKLLPGNDVEIKKFLAGCLKCSKEEKLSLMQSLDDATKQLDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 AFLNVVETNPFKHLTHLSLKLLPGNDVEIKKFLAGCLKCSKEEKLSLMQSLDDATKQLDF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 TRKTLAEKKQELDKLRNEWASHTAALTNKHSQELTNEKEKALQAQVQYQQQHEQQKKDLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 TRKTLAEKKQELDKLRNEWASHTAALTNKHSQELTNEKEKALQAQVQYQQQHEQQKKDLE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 ILHQQNIHQLQNRLSELEVANKDLTERKYKGDSTIRELKAKLSGVEEELQRTKQEVLSLR
       ::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
CCDS76 ILHQQNIHQLQNRLSELEAANKDLTERKYKGDSTIRELKAKLSGVEEELQRTKQEVLSLR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 RENSTLDVECHEKEKHVNQLQTKVAVLEQEIKDKDQLVLRTKEAFDTIQEQKVVLEENGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 RENSTLDVECHEKEKHVNQLQTKVAVLEQEIKDKDQLVLRTKEAFDTIQEQKVVLEENGE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE2 KNQVQLGKLEATIKSLSAELLKANEIIKKLQGDLKTLMGKLKLKNTVTIQQEKLLAEKEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 KNQVQLGKLEATIKSLSAELLKANEIIKKLQGDLKTLMGKLKLKNTVTIQQEKLLAEKEE
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE2 KLQKEQKELQDVGQSLRIKEQEVCKLQEQLEATVKKLEESKQLLKNNEKLITWLNKELNE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 KLQKEQKELQDVGQSLRIKEQEVCKLQEQLEATVKKLEESKQLLKNNEKLITWLNKELNE
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE2 NQLVRKQDVLGPSTTPPAHSSSNTIRSGISPNLNVVDGRLTYPTCGIGYPVSSAFAFQNT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 NQLVRKQDVLGPSTTPPAHSSSNTIRSGISPNLNVVDGRLTYPTCGIGYPVSSAFAFQNT
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE2 FPHSISAKNTSHPGSGTKVQFNLQFTKPNASLGDVQSGATISMPCSTDKENGENVGLESK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 FPHSISAKNTSHPGSGTKVQFNLQFTKPNASLGDVQSGATISMPCSTDKENGENVGLESK
              550       560       570       580       590       600

              610       620       630       640       650       
pF1KE2 YLKKREDSIPLRGLSQNLFSNSDHQRDGTLGALHTSSKPTALPSASSAYFPGQLPNS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 YLKKREDSIPLRGLSQNLFSNSDHQRDGTLGALHTSSKPTALPSASSAYFPGQLPNS
              610       620       630       640       650       




657 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 19:12:16 2016 done: Sun Nov  6 19:12:17 2016
 Total Scan time:  3.950 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]