Result of FASTA (omim) for
pFN21AE2292
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2292, 328 aa
1>>>pF1KE2292 328 - 328 aa - 328 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3934+/-0.000408; mu= 16.0678+/- 0.026
mean_var=83.7421+/-16.650, 0's: 0 Z-trim(111.8): 129 B-trim: 0 in 0/57
Lambda= 0.140153
statistics sampled from 20372 (20516) to 20372 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.61), E-opt: 0.2 (0.241), width: 16
Scan time: 7.670
The best scores are: opt bits E(85289)
NP_003865 (OMIM: 604513) SLAM family member 5 isof ( 328) 2133 441.3 1.3e-123
NP_001171810 (OMIM: 604513) SLAM family member 5 i ( 272) 1669 347.4 2e-95
NP_001317671 (OMIM: 604513) SLAM family member 5 i ( 339) 1670 347.7 2e-95
NP_001171808 (OMIM: 604513) SLAM family member 5 i ( 345) 1669 347.5 2.3e-95
NP_001171811 (OMIM: 604513) SLAM family member 5 i ( 214) 1267 266.1 4.8e-71
XP_011508397 (OMIM: 604513) PREDICTED: SLAM family ( 225) 804 172.5 7.6e-43
XP_016855704 (OMIM: 606446) PREDICTED: SLAM family ( 335) 455 102.0 1.8e-21
NP_443163 (OMIM: 606446) SLAM family member 6 isof ( 331) 454 101.8 2e-21
NP_001171643 (OMIM: 606446) SLAM family member 6 i ( 332) 454 101.8 2e-21
NP_254273 (OMIM: 608589) SLAM family member 9 isof ( 289) 429 96.7 6.1e-20
XP_016858245 (OMIM: 608589) PREDICTED: SLAM family ( 319) 427 96.4 8.7e-20
NP_001248385 (OMIM: 600684) T-lymphocyte surface a ( 641) 423 95.8 2.6e-19
XP_016856788 (OMIM: 600684) PREDICTED: T-lymphocyt ( 688) 423 95.8 2.7e-19
XP_016856787 (OMIM: 600684) PREDICTED: T-lymphocyt ( 697) 423 95.8 2.8e-19
XP_016856793 (OMIM: 600684) PREDICTED: T-lymphocyt ( 504) 410 93.1 1.3e-18
NP_002339 (OMIM: 600684) T-lymphocyte surface anti ( 655) 410 93.2 1.6e-18
XP_016856790 (OMIM: 600684) PREDICTED: T-lymphocyt ( 664) 410 93.2 1.6e-18
XP_016856789 (OMIM: 600684) PREDICTED: T-lymphocyt ( 678) 410 93.2 1.7e-18
XP_011507854 (OMIM: 600684) PREDICTED: T-lymphocyt ( 679) 410 93.2 1.7e-18
XP_011507852 (OMIM: 600684) PREDICTED: T-lymphocyt ( 701) 410 93.2 1.7e-18
XP_011507851 (OMIM: 600684) PREDICTED: T-lymphocyt ( 702) 410 93.2 1.7e-18
XP_011507850 (OMIM: 600684) PREDICTED: T-lymphocyt ( 703) 410 93.2 1.7e-18
XP_016856786 (OMIM: 600684) PREDICTED: T-lymphocyt ( 711) 410 93.2 1.7e-18
NP_001269521 (OMIM: 606625) SLAM family member 7 i ( 296) 399 90.7 4.2e-18
NP_067004 (OMIM: 606625) SLAM family member 7 isof ( 335) 395 89.9 8e-18
XP_011508131 (OMIM: 606625) PREDICTED: SLAM family ( 309) 362 83.2 7.7e-16
XP_011508130 (OMIM: 606625) PREDICTED: SLAM family ( 348) 362 83.3 8.4e-16
NP_001171644 (OMIM: 606446) SLAM family member 6 i ( 282) 345 79.7 7.8e-15
XP_016855705 (OMIM: 606446) PREDICTED: SLAM family ( 283) 345 79.7 7.8e-15
NP_001269525 (OMIM: 606625) SLAM family member 7 i ( 189) 265 63.4 4.3e-10
NP_001269519 (OMIM: 606625) SLAM family member 7 i ( 228) 261 62.7 8.6e-10
XP_016872850 (OMIM: 604004,611642,613925,613926) P ( 468) 247 60.1 1.1e-08
NP_001269522 (OMIM: 606625) SLAM family member 7 i ( 149) 240 58.3 1.2e-08
XP_016855706 (OMIM: 606446) PREDICTED: SLAM family ( 220) 234 57.2 3.7e-08
NP_001171645 (OMIM: 606446) SLAM family member 6 i ( 221) 234 57.2 3.7e-08
NP_001028839 (OMIM: 600684) T-lymphocyte surface a ( 193) 232 56.8 4.4e-08
NP_001139644 (OMIM: 608589) SLAM family member 9 i ( 198) 230 56.4 6e-08
NP_001269520 (OMIM: 606625) SLAM family member 7 i ( 188) 229 56.1 6.6e-08
NP_001269523 (OMIM: 606625) SLAM family member 7 i ( 241) 228 56.0 9.2e-08
NP_689935 (OMIM: 604004,611642,613925,613926) hepa ( 416) 230 56.6 1e-07
XP_005271506 (OMIM: 604004,611642,613925,613926) P ( 415) 228 56.2 1.4e-07
NP_001269524 (OMIM: 606625) SLAM family member 7 i ( 201) 216 53.5 4.3e-07
XP_011507924 (OMIM: 180300,605554) PREDICTED: natu ( 329) 215 53.5 7.2e-07
NP_003028 (OMIM: 603492) signaling lymphocytic act ( 335) 208 52.1 1.9e-06
XP_016857619 (OMIM: 603492) PREDICTED: signaling l ( 338) 203 51.1 3.9e-06
NP_001317683 (OMIM: 603492) signaling lymphocytic ( 357) 199 50.3 7.2e-06
XP_011507923 (OMIM: 180300,605554) PREDICTED: natu ( 334) 193 49.1 1.6e-05
XP_005245513 (OMIM: 603492) PREDICTED: signaling l ( 305) 189 48.2 2.6e-05
NP_001248386 (OMIM: 600684) T-lymphocyte surface a ( 565) 190 48.6 3.6e-05
XP_011507862 (OMIM: 600684) PREDICTED: T-lymphocyt ( 598) 190 48.7 3.7e-05
>>NP_003865 (OMIM: 604513) SLAM family member 5 isoform (328 aa)
initn: 2133 init1: 2133 opt: 2133 Z-score: 2340.3 bits: 441.3 E(85289): 1.3e-123
Smith-Waterman score: 2133; 100.0% identity (100.0% similar) in 328 aa overlap (1-328:1-328)
10 20 30 40 50 60
pF1KE2 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEEGNVLQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEEGNVLQI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 FQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLIL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 SSVFLFRLFKRRQDAASKKTIYTYIMASRNTQPAESRIYDEILQSKVLPSKEEPVNTVYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SSVFLFRLFKRRQDAASKKTIYTYIMASRNTQPAESRIYDEILQSKVLPSKEEPVNTVYS
250 260 270 280 290 300
310 320
pF1KE2 EVQFADKMGKASTQDSKPPGTSSYEIVI
::::::::::::::::::::::::::::
NP_003 EVQFADKMGKASTQDSKPPGTSSYEIVI
310 320
>>NP_001171810 (OMIM: 604513) SLAM family member 5 isofo (272 aa)
initn: 1669 init1: 1669 opt: 1669 Z-score: 1834.3 bits: 347.4 E(85289): 2e-95
Smith-Waterman score: 1669; 99.2% identity (99.6% similar) in 256 aa overlap (1-256:1-256)
10 20 30 40 50 60
pF1KE2 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEEGNVLQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEEGNVLQI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 FQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLIL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 SSVFLFRLFKRRQDAASKKTIYTYIMASRNTQPAESRIYDEILQSKVLPSKEEPVNTVYS
::::::::::::: :.
NP_001 SSVFLFRLFKRRQGASLQGRASEHSLFRSAVC
250 260 270
>>NP_001317671 (OMIM: 604513) SLAM family member 5 isofo (339 aa)
initn: 2111 init1: 1664 opt: 1670 Z-score: 1834.1 bits: 347.7 E(85289): 2e-95
Smith-Waterman score: 2092; 96.5% identity (96.5% similar) in 339 aa overlap (1-328:1-339)
10 20 30 40 50 60
pF1KE2 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEEGNVLQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEEGNVLQI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 FQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLIL
190 200 210 220 230 240
250 260 270 280
pF1KE2 SSVFLFRLFKRRQD-----------AASKKTIYTYIMASRNTQPAESRIYDEILQSKVLP
::::::::::::: :::::::::::::::::::::::::::::::::::
NP_001 SSVFLFRLFKRRQGSCLNTFTKNPYAASKKTIYTYIMASRNTQPAESRIYDEILQSKVLP
250 260 270 280 290 300
290 300 310 320
pF1KE2 SKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
:::::::::::::::::::::::::::::::::::::::
NP_001 SKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
310 320 330
>>NP_001171808 (OMIM: 604513) SLAM family member 5 isofo (345 aa)
initn: 2111 init1: 1664 opt: 1669 Z-score: 1832.9 bits: 347.5 E(85289): 2.3e-95
Smith-Waterman score: 2080; 94.8% identity (94.8% similar) in 345 aa overlap (1-328:1-345)
10 20 30 40 50 60
pF1KE2 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEEGNVLQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEEGNVLQI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 FQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLIL
190 200 210 220 230 240
250 260 270 280
pF1KE2 SSVFLFRLFKRRQD-----------------AASKKTIYTYIMASRNTQPAESRIYDEIL
::::::::::::: :::::::::::::::::::::::::::::
NP_001 SSVFLFRLFKRRQGRIFPEGSCLNTFTKNPYAASKKTIYTYIMASRNTQPAESRIYDEIL
250 260 270 280 290 300
290 300 310 320
pF1KE2 QSKVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
:::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSKVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
310 320 330 340
>>NP_001171811 (OMIM: 604513) SLAM family member 5 isofo (214 aa)
initn: 1362 init1: 1267 opt: 1267 Z-score: 1396.5 bits: 266.1 E(85289): 4.8e-71
Smith-Waterman score: 1267; 100.0% identity (100.0% similar) in 198 aa overlap (131-328:17-214)
110 120 130 140 150 160
pF1KE2 MEDAGDYKADINTQADPYTTTKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKE
::::::::::::::::::::::::::::::
NP_001 MAQHHLWILLLCLQTCRLGKPKITQSLMASVNSTCNVTLTCSVEKE
10 20 30 40
170 180 190 200 210 220
pF1KE2 EKNVTYNWSPLGEEGNVLQIFQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EKNVTYNWSPLGEEGNVLQIFQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFR
50 60 70 80 90 100
230 240 250 260 270 280
pF1KE2 THHTGLLSVLAMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTYIMASRNTQPAESRIYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 THHTGLLSVLAMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTYIMASRNTQPAESRIYD
110 120 130 140 150 160
290 300 310 320
pF1KE2 EILQSKVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EILQSKVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
170 180 190 200 210
>>XP_011508397 (OMIM: 604513) PREDICTED: SLAM family mem (225 aa)
initn: 1340 init1: 798 opt: 804 Z-score: 890.2 bits: 172.5 E(85289): 7.6e-43
Smith-Waterman score: 1226; 94.3% identity (94.3% similar) in 209 aa overlap (131-328:17-225)
110 120 130 140 150 160
pF1KE2 MEDAGDYKADINTQADPYTTTKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKE
::::::::::::::::::::::::::::::
XP_011 MAQHHLWILLLCLQTCRLGKPKITQSLMASVNSTCNVTLTCSVEKE
10 20 30 40
170 180 190 200 210 220
pF1KE2 EKNVTYNWSPLGEEGNVLQIFQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKNVTYNWSPLGEEGNVLQIFQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFR
50 60 70 80 90 100
230 240 250 260
pF1KE2 THHTGLLSVLAMFFLLVLILSSVFLFRLFKRRQD-----------AASKKTIYTYIMASR
::::::::::::::::::::::::::::::::: :::::::::::::::
XP_011 THHTGLLSVLAMFFLLVLILSSVFLFRLFKRRQGSCLNTFTKNPYAASKKTIYTYIMASR
110 120 130 140 150 160
270 280 290 300 310 320
pF1KE2 NTQPAESRIYDEILQSKVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTQPAESRIYDEILQSKVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
170 180 190 200 210 220
>>XP_016855704 (OMIM: 606446) PREDICTED: SLAM family mem (335 aa)
initn: 274 init1: 105 opt: 455 Z-score: 506.5 bits: 102.0 E(85289): 1.8e-21
Smith-Waterman score: 455; 29.9% identity (64.5% similar) in 324 aa overlap (6-308:2-318)
10 20 30 40 50
pF1KE2 MAQHHLWI---LLLCLQTWPEAAGKDSEI--FTVNGILGESVTFPVNIQEPRQVKIIAWT
::. ::. . : . ..: . . ::::::::::.:... ..:..:.:
XP_016 MLWLFQSLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEKVNFITWL
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 -SKTSVAYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQ
..::.:...: .... : . ::. . .:.. . .:.: .:.:.:::.:.:.:.:.:.
XP_016 FNETSLAFIVPHETKS-PEIHVTNPKQGKRLN-FTQSYSLQLSNLKMEDTGSYRAQISTK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 ADPYTTTKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEE
.. .. :.:.: :.: . ..:. . : ::.. :::::: . ::.. : ::.
XP_016 TSAKLSS--YTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNT
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 GNV---LQIFQTPE-DQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVL
. : . :. ..: ::: :.: ::: : :.::..:: :. . . . :. :
XP_016 LSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVS
180 190 200 210 220 230
240 250 260 270 280
pF1KE2 AMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTYIMA--SRNTQ-----PAESRIYDEIL
.. ... .: ..:. ....:.:. : .: : : .:: . :... .: .
XP_016 GICIVFGFI---ILLLLVLRKRRDSLSLSTQRTQGPAESARNLEYVSVSPTNNTVYASVT
240 250 260 270 280
290 300 310 320
pF1KE2 QS----KVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
.: .. .:. . :.:: .. . ..
XP_016 HSNRETEIWTPRENDTITIYSTINHSKEVSPRLLHVFIFLPLSTDL
290 300 310 320 330
>>NP_443163 (OMIM: 606446) SLAM family member 6 isoform (331 aa)
initn: 294 init1: 105 opt: 454 Z-score: 505.5 bits: 101.8 E(85289): 2e-21
Smith-Waterman score: 454; 30.6% identity (64.4% similar) in 317 aa overlap (6-302:2-311)
10 20 30 40 50
pF1KE2 MAQHHLWI---LLLCLQTWPEAAGKDSEI--FTVNGILGESVTFPVNIQEPRQVKIIAWT
::. ::. . : . ..: . . ::::::::::.:... ..:..:.:
NP_443 MLWLFQSLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEKVNFITWL
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 -SKTSVAYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQ
..::.:...: .... : . ::. . .:.. . .:.: .:.:.:::.:.:.:.:.:.
NP_443 FNETSLAFIVPHETKS-PEIHVTNPKQGKRLN-FTQSYSLQLSNLKMEDTGSYRAQISTK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 ADPYTTTKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEE
.. .. :.:.: :.: . ..:. . : ::.. :::::: . ::.. : ::.
NP_443 TSAKLSS--YTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNT
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 GNV---LQIFQTPE-DQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVL
. : . :. ..: ::: :.: ::: : :.::..:: :. . . . :. :
NP_443 LSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVS
180 190 200 210 220 230
240 250 260 270 280
pF1KE2 AMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTYIMAS-RNTQ-----PAESRIYDEILQ
.. ... .: ..:. ....:.:. : .: : : :: . :... .: . .
NP_443 GICIVFGFI---ILLLLVLRKRRDSLSLSTQRTQGPESARNLEYVSVSPTNNTVYASVTH
240 250 260 270 280
290 300 310 320
pF1KE2 S----KVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
: .. .:. . :.:: .
NP_443 SNRETEIWTPRENDTITIYSTINHSKESKPTFSRATALDNVV
290 300 310 320 330
>>NP_001171643 (OMIM: 606446) SLAM family member 6 isofo (332 aa)
initn: 288 init1: 119 opt: 454 Z-score: 505.5 bits: 101.8 E(85289): 2e-21
Smith-Waterman score: 454; 30.5% identity (64.5% similar) in 318 aa overlap (6-302:2-312)
10 20 30 40 50
pF1KE2 MAQHHLWI---LLLCLQTWPEAAGKDSEI--FTVNGILGESVTFPVNIQEPRQVKIIAWT
::. ::. . : . ..: . . ::::::::::.:... ..:..:.:
NP_001 MLWLFQSLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEKVNFITWL
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 -SKTSVAYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQ
..::.:...: .... : . ::. . .:.. . .:.: .:.:.:::.:.:.:.:.:.
NP_001 FNETSLAFIVPHETKS-PEIHVTNPKQGKRLN-FTQSYSLQLSNLKMEDTGSYRAQISTK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 ADPYTTTKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEE
.. .. :.:.: :.: . ..:. . : ::.. :::::: . ::.. : ::.
NP_001 TSAKLSS--YTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNT
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 GNV---LQIFQTPE-DQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVL
. : . :. ..: ::: :.: ::: : :.::..:: :. . . . :. :
NP_001 LSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVS
180 190 200 210 220 230
240 250 260 270 280
pF1KE2 AMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTYIMA--SRNTQ-----PAESRIYDEIL
.. ... .: ..:. ....:.:. : .: : : .:: . :... .: .
NP_001 GICIVFGFI---ILLLLVLRKRRDSLSLSTQRTQGPAESARNLEYVSVSPTNNTVYASVT
240 250 260 270 280
290 300 310 320
pF1KE2 QS----KVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
.: .. .:. . :.:: .
NP_001 HSNRETEIWTPRENDTITIYSTINHSKESKPTFSRATALDNVV
290 300 310 320 330
>>NP_254273 (OMIM: 608589) SLAM family member 9 isoform (289 aa)
initn: 482 init1: 345 opt: 429 Z-score: 479.0 bits: 96.7 E(85289): 6.1e-20
Smith-Waterman score: 469; 31.7% identity (63.1% similar) in 287 aa overlap (7-276:6-287)
10 20 30 40 50
pF1KE2 MAQHHLWILLLCL-------QTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIA
:.::: : . : .... : ..: ::...:..: ..:. :
NP_254 MCAFPWLLLLLLLQEGSQRRLWRWCGSEE-----VVAVLQESISLPLEIPPDEEVENII
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 WTSKTSVAYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINT
:.:. :.: :.:: .. ::. .: .. : :.:.: ::.: ::.: :.:..:
NP_254 WSSHKSLATVVPGKEGHPATIMVTNPHYQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 QADPYTTTKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGE
... .: ..::. .:: :..:.:: .. .: ...:...:.::::: ..::.: :.
NP_254 RTSQISTMQQYNICVYRWLSEPQITVNFESSGEGACSMSLVCSVEKAGMDMTYSWLSRGD
120 130 140 150 160 170
180 190 200 210 220
pF1KE2 ------EGNVLQIFQTPEDQELTYTCTAQNPVSNNSDS-ISARQLCADIAMGFRTHHTG-
:: ::. : :. :.::: :.::.:: :. : . :: .. . :.
NP_254 STYTFHEGPVLSTSWRPGDSALSYTCRANNPISNVSSCPIPDGPFYADPNYASEKPSTAF
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE2 --LLSVLAMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTYIMASRNTQPAESRIYDEIL
: . : .:.:::.. .....:. ::.. :: . . . ....:. :
NP_254 CLLAKGLLIFLLLVILAMGLWVIRVQKRHKMPRMKKLMRNRMKLRKEAKPGSSPA
240 250 260 270 280
290 300 310 320
pF1KE2 QSKVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
328 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 00:46:49 2016 done: Mon Nov 7 00:46:50 2016
Total Scan time: 7.670 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]