Result of FASTA (omim) for
pFN21AE2288
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2288, 287 aa
1>>>pF1KE2288 287 - 287 aa - 287 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6397+/-0.000403; mu= 13.8116+/- 0.025
mean_var=86.7120+/-18.216, 0's: 0 Z-trim(112.8): 200 B-trim: 376 in 1/53
Lambda= 0.137732
statistics sampled from 21658 (21879) to 21658 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.63), E-opt: 0.2 (0.257), width: 16
Scan time: 6.970
The best scores are: opt bits E(85289)
NP_001991 (OMIM: 147045) immunoglobulin alpha Fc r ( 287) 1955 398.5 7.7e-111
NP_579806 (OMIM: 147045) immunoglobulin alpha Fc r ( 275) 1799 367.5 1.6e-101
XP_016881963 (OMIM: 147045) PREDICTED: immunoglobu ( 260) 1765 360.7 1.6e-99
XP_011524927 (OMIM: 147045) PREDICTED: immunoglobu ( 260) 1765 360.7 1.6e-99
XP_016881962 (OMIM: 147045) PREDICTED: immunoglobu ( 260) 1765 360.7 1.6e-99
NP_579803 (OMIM: 147045) immunoglobulin alpha Fc r ( 265) 1325 273.3 3.5e-73
NP_579812 (OMIM: 147045) immunoglobulin alpha Fc r ( 253) 1169 242.3 7.2e-64
NP_579808 (OMIM: 147045) immunoglobulin alpha Fc r ( 209) 1148 238.1 1.1e-62
NP_579811 (OMIM: 147045) immunoglobulin alpha Fc r ( 178) 1143 237.0 2e-62
NP_579805 (OMIM: 147045) immunoglobulin alpha Fc r ( 191) 825 173.8 2.2e-43
NP_579807 (OMIM: 147045) immunoglobulin alpha Fc r ( 179) 669 142.8 4.5e-34
XP_011524692 (OMIM: 604812) PREDICTED: leukocyte i ( 366) 481 105.7 1.4e-22
XP_011524693 (OMIM: 604812) PREDICTED: leukocyte i ( 267) 472 103.8 3.7e-22
NP_006855 (OMIM: 604820) leukocyte immunoglobulin- ( 631) 426 94.9 4.1e-19
NP_001074919 (OMIM: 604820) leukocyte immunoglobul ( 632) 426 94.9 4.1e-19
NP_001307889 (OMIM: 604820) leukocyte immunoglobul ( 648) 426 94.9 4.1e-19
XP_011524684 (OMIM: 604820) PREDICTED: leukocyte i ( 649) 426 94.9 4.2e-19
XP_011524683 (OMIM: 604820) PREDICTED: leukocyte i ( 649) 426 94.9 4.2e-19
XP_011525832 (OMIM: 604530) PREDICTED: natural cyt ( 229) 419 93.2 4.8e-19
XP_011525831 (OMIM: 604530) PREDICTED: natural cyt ( 240) 419 93.2 5e-19
XP_011525830 (OMIM: 604530) PREDICTED: natural cyt ( 248) 419 93.2 5.2e-19
NP_001138930 (OMIM: 604530) natural cytotoxicity t ( 287) 419 93.3 5.8e-19
NP_001138929 (OMIM: 604530) natural cytotoxicity t ( 303) 419 93.3 6e-19
NP_004820 (OMIM: 604530) natural cytotoxicity trig ( 304) 419 93.3 6e-19
XP_011524640 (OMIM: 604811) PREDICTED: leukocyte i ( 460) 421 93.8 6.3e-19
NP_001129158 (OMIM: 616802) T-cell-interacting, ac ( 271) 413 92.1 1.3e-18
NP_001265359 (OMIM: 604821) leukocyte immunoglobul ( 254) 410 91.5 1.8e-18
NP_036408 (OMIM: 607517) leukocyte immunoglobulin- ( 499) 413 92.3 2e-18
NP_001265356 (OMIM: 604821) leukocyte immunoglobul ( 447) 410 91.7 2.8e-18
NP_001265357 (OMIM: 604821) leukocyte immunoglobul ( 448) 410 91.7 2.8e-18
NP_001265355 (OMIM: 604821) leukocyte immunoglobul ( 448) 410 91.7 2.8e-18
XP_016881706 (OMIM: 604821) PREDICTED: leukocyte i ( 487) 410 91.7 3e-18
XP_016881705 (OMIM: 604821) PREDICTED: leukocyte i ( 489) 410 91.7 3e-18
XP_016881704 (OMIM: 604821) PREDICTED: leukocyte i ( 490) 410 91.7 3e-18
NP_067073 (OMIM: 606047) leukocyte immunoglobulin- ( 299) 394 88.3 1.9e-17
NP_001265247 (OMIM: 604810) leukocyte immunoglobul ( 289) 392 87.9 2.4e-17
NP_870994 (OMIM: 606047) leukocyte immunoglobulin- ( 265) 387 86.9 4.5e-17
XP_011524689 (OMIM: 604812) PREDICTED: leukocyte i ( 454) 390 87.7 4.5e-17
NP_001277199 (OMIM: 604812) leukocyte immunoglobul ( 454) 390 87.7 4.5e-17
NP_006857 (OMIM: 604812) leukocyte immunoglobulin- ( 466) 390 87.7 4.6e-17
NP_001317579 (OMIM: 616802) T-cell-interacting, ac ( 279) 374 84.3 2.8e-16
XP_011546673 (OMIM: 604936) PREDICTED: killer cell ( 235) 351 79.7 5.8e-15
XP_016881712 (OMIM: 604820) PREDICTED: leukocyte i ( 619) 356 81.0 6.2e-15
XP_016881711 (OMIM: 604820) PREDICTED: leukocyte i ( 620) 356 81.0 6.2e-15
XP_016881710 (OMIM: 604820) PREDICTED: leukocyte i ( 636) 356 81.0 6.3e-15
XP_016881709 (OMIM: 604820) PREDICTED: leukocyte i ( 637) 356 81.0 6.3e-15
XP_016881708 (OMIM: 604820) PREDICTED: leukocyte i ( 637) 356 81.0 6.3e-15
XP_016881707 (OMIM: 604820) PREDICTED: leukocyte i ( 638) 356 81.0 6.3e-15
NP_055327 (OMIM: 604952) killer cell immunoglobuli ( 304) 351 79.8 7.1e-15
XP_011546672 (OMIM: 604936) PREDICTED: killer cell ( 304) 351 79.8 7.1e-15
>>NP_001991 (OMIM: 147045) immunoglobulin alpha Fc recep (287 aa)
initn: 1955 init1: 1955 opt: 1955 Z-score: 2111.0 bits: 398.5 E(85289): 7.7e-111
Smith-Waterman score: 1955; 100.0% identity (100.0% similar) in 287 aa overlap (1-287:1-287)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
190 200 210 220 230 240
250 260 270 280
pF1KE2 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
250 260 270 280
>>NP_579806 (OMIM: 147045) immunoglobulin alpha Fc recep (275 aa)
initn: 1861 init1: 1799 opt: 1799 Z-score: 1943.7 bits: 367.5 E(85289): 1.6e-101
Smith-Waterman score: 1841; 95.8% identity (95.8% similar) in 287 aa overlap (1-287:1-275)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
::::::::::: :::::::::::::::::::::::::::::::::::::
NP_579 MDPKQTTLLCL------------GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
10 20 30 40
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_579 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_579 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE2 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_579 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
170 180 190 200 210 220
250 260 270 280
pF1KE2 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
:::::::::::::::::::::::::::::::::::::::::::::::
NP_579 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
230 240 250 260 270
>>XP_016881963 (OMIM: 147045) PREDICTED: immunoglobulin (260 aa)
initn: 1765 init1: 1765 opt: 1765 Z-score: 1907.5 bits: 360.7 E(85289): 1.6e-99
Smith-Waterman score: 1765; 100.0% identity (100.0% similar) in 260 aa overlap (28-287:1-260)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
:::::::::::::::::::::::::::::::::
XP_016 MPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
10 20 30
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE2 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
160 170 180 190 200 210
250 260 270 280
pF1KE2 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
220 230 240 250 260
>>XP_011524927 (OMIM: 147045) PREDICTED: immunoglobulin (260 aa)
initn: 1765 init1: 1765 opt: 1765 Z-score: 1907.5 bits: 360.7 E(85289): 1.6e-99
Smith-Waterman score: 1765; 100.0% identity (100.0% similar) in 260 aa overlap (28-287:1-260)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
:::::::::::::::::::::::::::::::::
XP_011 MPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
10 20 30
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE2 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
160 170 180 190 200 210
250 260 270 280
pF1KE2 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
220 230 240 250 260
>>XP_016881962 (OMIM: 147045) PREDICTED: immunoglobulin (260 aa)
initn: 1765 init1: 1765 opt: 1765 Z-score: 1907.5 bits: 360.7 E(85289): 1.6e-99
Smith-Waterman score: 1765; 100.0% identity (100.0% similar) in 260 aa overlap (28-287:1-260)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
:::::::::::::::::::::::::::::::::
XP_016 MPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
10 20 30
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE2 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
160 170 180 190 200 210
250 260 270 280
pF1KE2 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
220 230 240 250 260
>>NP_579803 (OMIM: 147045) immunoglobulin alpha Fc recep (265 aa)
initn: 1782 init1: 1325 opt: 1325 Z-score: 1434.9 bits: 273.3 E(85289): 3.5e-73
Smith-Waterman score: 1742; 92.3% identity (92.3% similar) in 287 aa overlap (1-287:1-265)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_579 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_579 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_579 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
:::::::::::::: ::::::::::::::::::::::::
NP_579 GPVDLNVSGIYRCY----------------------DSIHQDYTTQNLIRMAVAGLVLVA
190 200 210
250 260 270 280
pF1KE2 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
:::::::::::::::::::::::::::::::::::::::::::::::
NP_579 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
220 230 240 250 260
>>NP_579812 (OMIM: 147045) immunoglobulin alpha Fc recep (253 aa)
initn: 1688 init1: 1169 opt: 1169 Z-score: 1267.6 bits: 242.3 E(85289): 7.2e-64
Smith-Waterman score: 1628; 88.2% identity (88.2% similar) in 287 aa overlap (1-287:1-253)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
::::::::::: :::::::::::::::::::::::::::::::::::::
NP_579 MDPKQTTLLCL------------GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
10 20 30 40
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_579 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_579 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE2 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
:::::::::::::: ::::::::::::::::::::::::
NP_579 GPVDLNVSGIYRCY----------------------DSIHQDYTTQNLIRMAVAGLVLVA
170 180 190 200
250 260 270 280
pF1KE2 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
:::::::::::::::::::::::::::::::::::::::::::::::
NP_579 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
210 220 230 240 250
>>NP_579808 (OMIM: 147045) immunoglobulin alpha Fc recep (209 aa)
initn: 1210 init1: 1148 opt: 1148 Z-score: 1246.2 bits: 238.1 E(85289): 1.1e-62
Smith-Waterman score: 1190; 93.8% identity (93.8% similar) in 192 aa overlap (1-192:1-180)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
::::::::::: :::::::::::::::::::::::::::::::::::::
NP_579 MDPKQTTLLCL------------GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
10 20 30 40
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_579 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_579 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE2 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
::::::::::::
NP_579 GPVDLNVSGIYRLHPPRLHDAELDPHGRGRTGPRGSLGHTG
170 180 190 200
>>NP_579811 (OMIM: 147045) immunoglobulin alpha Fc recep (178 aa)
initn: 1143 init1: 1143 opt: 1143 Z-score: 1241.9 bits: 237.0 E(85289): 2e-62
Smith-Waterman score: 1143; 98.2% identity (98.8% similar) in 171 aa overlap (117-287:8-178)
90 100 110 120 130 140
pF1KE2 IDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADRGLVLMPGENISLTC
:. ::::::::::::::::::::::::::
NP_579 MDPKQTTLLCLGLYGKPFLSADRGLVLMPGENISLTC
10 20 30
150 160 170 180 190 200
pF1KE2 SSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_579 SSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSF
40 50 60 70 80 90
210 220 230 240 250 260
pF1KE2 PSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_579 PSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEP
100 110 120 130 140 150
270 280
pF1KE2 SWSQQMCQPGLTFARTPSVCK
:::::::::::::::::::::
NP_579 SWSQQMCQPGLTFARTPSVCK
160 170
>>NP_579805 (OMIM: 147045) immunoglobulin alpha Fc recep (191 aa)
initn: 816 init1: 816 opt: 825 Z-score: 899.9 bits: 173.8 E(85289): 2.2e-43
Smith-Waterman score: 1085; 66.6% identity (66.6% similar) in 287 aa overlap (1-287:1-191)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_579 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_579 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
NP_579 ------------------------------------------------------------
190 200 210 220 230 240
pF1KE2 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
::::::::::::::::::::::::
NP_579 ------------------------------------DSIHQDYTTQNLIRMAVAGLVLVA
130 140
250 260 270 280
pF1KE2 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
:::::::::::::::::::::::::::::::::::::::::::::::
NP_579 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
150 160 170 180 190
287 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 00:24:10 2016 done: Mon Nov 7 00:24:11 2016
Total Scan time: 6.970 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]