Result of FASTA (ccds) for
pFN21AE2288
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2288, 287 aa
1>>>pF1KE2288 287 - 287 aa - 287 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8737+/-0.000974; mu= 12.2948+/- 0.058
mean_var=78.8281+/-16.100, 0's: 0 Z-trim(105.8): 85 B-trim: 492 in 1/50
Lambda= 0.144455
statistics sampled from 8548 (8641) to 8548 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.642), E-opt: 0.2 (0.265), width: 16
Scan time: 2.220
The best scores are: opt bits E(32554)
CCDS12907.1 FCAR gene_id:2204|Hs108|chr19 ( 287) 1955 417.0 7.8e-117
CCDS12909.1 FCAR gene_id:2204|Hs108|chr19 ( 275) 1799 384.5 4.6e-107
CCDS42622.1 FCAR gene_id:2204|Hs108|chr19 ( 265) 1325 285.7 2.4e-77
CCDS42623.1 FCAR gene_id:2204|Hs108|chr19 ( 253) 1169 253.2 1.4e-67
CCDS42625.1 FCAR gene_id:2204|Hs108|chr19 ( 209) 1148 248.8 2.5e-66
CCDS12910.1 FCAR gene_id:2204|Hs108|chr19 ( 178) 1143 247.7 4.6e-66
CCDS12908.1 FCAR gene_id:2204|Hs108|chr19 ( 191) 825 181.4 4.3e-46
CCDS42624.1 FCAR gene_id:2204|Hs108|chr19 ( 179) 669 148.9 2.5e-36
CCDS33105.1 LILRB3 gene_id:11025|Hs108|chr19 ( 631) 426 98.5 1.3e-20
CCDS46175.1 LILRB3 gene_id:11025|Hs108|chr19 ( 632) 426 98.5 1.3e-20
CCDS46182.1 NCR1 gene_id:9437|Hs108|chr19 ( 287) 419 96.9 1.8e-20
CCDS46181.1 NCR1 gene_id:9437|Hs108|chr19 ( 303) 419 96.9 1.9e-20
CCDS12911.1 NCR1 gene_id:9437|Hs108|chr19 ( 304) 419 96.9 1.9e-20
CCDS46173.1 TARM1 gene_id:441864|Hs108|chr19 ( 271) 413 95.6 4.1e-20
CCDS12890.1 LILRA4 gene_id:23547|Hs108|chr19 ( 499) 413 95.8 6.9e-20
CCDS42618.1 LILRB4 gene_id:11006|Hs108|chr19 ( 447) 410 95.1 9.6e-20
CCDS12902.1 LILRB4 gene_id:11006|Hs108|chr19 ( 448) 410 95.1 9.7e-20
CCDS42610.1 LILRA6 gene_id:79168|Hs108|chr19 ( 481) 406 94.3 1.8e-19
CCDS12888.1 LILRA5 gene_id:353514|Hs108|chr19 ( 299) 394 91.7 6.9e-19
CCDS62802.1 LILRA1 gene_id:11024|Hs108|chr19 ( 289) 392 91.3 9e-19
CCDS74453.1 LILRA2 gene_id:11027|Hs108|chr19 ( 454) 390 91.0 1.8e-18
CCDS12900.1 LILRA2 gene_id:11027|Hs108|chr19 ( 466) 390 91.0 1.8e-18
CCDS82395.1 TARM1 gene_id:441864|Hs108|chr19 ( 279) 374 87.5 1.2e-17
CCDS12904.1 KIR2DL1 gene_id:3802|Hs108|chr19 ( 348) 348 82.2 6e-16
CCDS12889.1 LILRA5 gene_id:353514|Hs108|chr19 ( 287) 334 79.2 3.9e-15
CCDS58678.1 GP6 gene_id:51206|Hs108|chr19 ( 321) 328 78.0 1e-14
CCDS46184.1 GP6 gene_id:51206|Hs108|chr19 ( 339) 327 77.8 1.2e-14
CCDS42626.1 GP6 gene_id:51206|Hs108|chr19 ( 620) 327 77.9 2.1e-14
CCDS42621.1 KIR3DL1 gene_id:3811|Hs108|chr19 ( 444) 323 77.0 2.8e-14
CCDS12874.1 OSCAR gene_id:126014|Hs108|chr19 ( 252) 318 75.8 3.5e-14
CCDS58677.1 KIR3DL2 gene_id:3812|Hs108|chr19 ( 438) 321 76.6 3.6e-14
CCDS12875.1 OSCAR gene_id:126014|Hs108|chr19 ( 263) 318 75.8 3.6e-14
CCDS12873.1 OSCAR gene_id:126014|Hs108|chr19 ( 267) 318 75.8 3.7e-14
CCDS12906.1 KIR3DL2 gene_id:3812|Hs108|chr19 ( 455) 321 76.6 3.8e-14
CCDS55490.1 IGSF1 gene_id:3547|Hs108|chrX (1327) 317 76.0 1.7e-13
CCDS14629.1 IGSF1 gene_id:3547|Hs108|chrX (1336) 317 76.0 1.7e-13
CCDS55491.1 IGSF1 gene_id:3547|Hs108|chrX (1341) 317 76.0 1.7e-13
CCDS12901.1 LILRA1 gene_id:11024|Hs108|chr19 ( 489) 291 70.3 3e-12
CCDS62791.1 LILRB2 gene_id:10288|Hs108|chr19 ( 482) 284 68.9 8.3e-12
CCDS62792.1 LILRB2 gene_id:10288|Hs108|chr19 ( 510) 284 68.9 8.7e-12
CCDS42612.1 LILRB2 gene_id:10288|Hs108|chr19 ( 597) 284 68.9 9.9e-12
CCDS12886.1 LILRB2 gene_id:10288|Hs108|chr19 ( 598) 284 68.9 9.9e-12
CCDS46179.1 LILRA2 gene_id:11027|Hs108|chr19 ( 483) 278 67.6 2e-11
>>CCDS12907.1 FCAR gene_id:2204|Hs108|chr19 (287 aa)
initn: 1955 init1: 1955 opt: 1955 Z-score: 2211.0 bits: 417.0 E(32554): 7.8e-117
Smith-Waterman score: 1955; 100.0% identity (100.0% similar) in 287 aa overlap (1-287:1-287)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
190 200 210 220 230 240
250 260 270 280
pF1KE2 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
250 260 270 280
>>CCDS12909.1 FCAR gene_id:2204|Hs108|chr19 (275 aa)
initn: 1861 init1: 1799 opt: 1799 Z-score: 2035.6 bits: 384.5 E(32554): 4.6e-107
Smith-Waterman score: 1841; 95.8% identity (95.8% similar) in 287 aa overlap (1-287:1-275)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
::::::::::: :::::::::::::::::::::::::::::::::::::
CCDS12 MDPKQTTLLCL------------GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
10 20 30 40
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE2 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
170 180 190 200 210 220
250 260 270 280
pF1KE2 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
230 240 250 260 270
>>CCDS42622.1 FCAR gene_id:2204|Hs108|chr19 (265 aa)
initn: 1782 init1: 1325 opt: 1325 Z-score: 1501.9 bits: 285.7 E(32554): 2.4e-77
Smith-Waterman score: 1742; 92.3% identity (92.3% similar) in 287 aa overlap (1-287:1-265)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
:::::::::::::: ::::::::::::::::::::::::
CCDS42 GPVDLNVSGIYRCY----------------------DSIHQDYTTQNLIRMAVAGLVLVA
190 200 210
250 260 270 280
pF1KE2 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
220 230 240 250 260
>>CCDS42623.1 FCAR gene_id:2204|Hs108|chr19 (253 aa)
initn: 1688 init1: 1169 opt: 1169 Z-score: 1326.5 bits: 253.2 E(32554): 1.4e-67
Smith-Waterman score: 1628; 88.2% identity (88.2% similar) in 287 aa overlap (1-287:1-253)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
::::::::::: :::::::::::::::::::::::::::::::::::::
CCDS42 MDPKQTTLLCL------------GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
10 20 30 40
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE2 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
:::::::::::::: ::::::::::::::::::::::::
CCDS42 GPVDLNVSGIYRCY----------------------DSIHQDYTTQNLIRMAVAGLVLVA
170 180 190 200
250 260 270 280
pF1KE2 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
210 220 230 240 250
>>CCDS42625.1 FCAR gene_id:2204|Hs108|chr19 (209 aa)
initn: 1210 init1: 1148 opt: 1148 Z-score: 1304.2 bits: 248.8 E(32554): 2.5e-66
Smith-Waterman score: 1190; 93.8% identity (93.8% similar) in 192 aa overlap (1-192:1-180)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
::::::::::: :::::::::::::::::::::::::::::::::::::
CCDS42 MDPKQTTLLCL------------GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
10 20 30 40
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE2 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
::::::::::::
CCDS42 GPVDLNVSGIYRLHPPRLHDAELDPHGRGRTGPRGSLGHTG
170 180 190 200
>>CCDS12910.1 FCAR gene_id:2204|Hs108|chr19 (178 aa)
initn: 1143 init1: 1143 opt: 1143 Z-score: 1299.6 bits: 247.7 E(32554): 4.6e-66
Smith-Waterman score: 1143; 98.2% identity (98.8% similar) in 171 aa overlap (117-287:8-178)
90 100 110 120 130 140
pF1KE2 IDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADRGLVLMPGENISLTC
:. ::::::::::::::::::::::::::
CCDS12 MDPKQTTLLCLGLYGKPFLSADRGLVLMPGENISLTC
10 20 30
150 160 170 180 190 200
pF1KE2 SSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 SSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSF
40 50 60 70 80 90
210 220 230 240 250 260
pF1KE2 PSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVALLAILVENWHSHTALNKEASADVAEP
100 110 120 130 140 150
270 280
pF1KE2 SWSQQMCQPGLTFARTPSVCK
:::::::::::::::::::::
CCDS12 SWSQQMCQPGLTFARTPSVCK
160 170
>>CCDS12908.1 FCAR gene_id:2204|Hs108|chr19 (191 aa)
initn: 816 init1: 816 opt: 825 Z-score: 941.0 bits: 181.4 E(32554): 4.3e-46
Smith-Waterman score: 1085; 66.6% identity (66.6% similar) in 287 aa overlap (1-287:1-191)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
CCDS12 ------------------------------------------------------------
190 200 210 220 230 240
pF1KE2 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
::::::::::::::::::::::::
CCDS12 ------------------------------------DSIHQDYTTQNLIRMAVAGLVLVA
130 140
250 260 270 280
pF1KE2 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
150 160 170 180 190
>>CCDS42624.1 FCAR gene_id:2204|Hs108|chr19 (179 aa)
initn: 722 init1: 660 opt: 669 Z-score: 765.7 bits: 148.9 E(32554): 2.5e-36
Smith-Waterman score: 971; 62.4% identity (62.4% similar) in 287 aa overlap (1-287:1-179)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
::::::::::: :::::::::::::::::::::::::::::::::::::
CCDS42 MDPKQTTLLCL------------GDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
10 20 30 40
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSL
CCDS42 ------------------------------------------------------------
190 200 210 220 230 240
pF1KE2 GPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVAGLVLVA
::::::::::::::::::::::::
CCDS42 ------------------------------------DSIHQDYTTQNLIRMAVAGLVLVA
110 120 130
250 260 270 280
pF1KE2 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
140 150 160 170
>>CCDS33105.1 LILRB3 gene_id:11025|Hs108|chr19 (631 aa)
initn: 504 init1: 147 opt: 426 Z-score: 483.7 bits: 98.5 E(32554): 1.3e-20
Smith-Waterman score: 426; 38.2% identity (58.6% similar) in 220 aa overlap (1-214:1-217)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
: : :.:::: : :: : . : : :: : . :. . :: . : : ::. :: ::
CCDS33 MTPALTALLCLGLSLGPRTRMQAGPFPKPTLWAEPGSVISWGSPVTIWCQGSLEAQEYQL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
:... . : . .. .: : : ..::::.:.: . . :: ::::.:
CCDS33 --DKEGSPEPWDRNNPLEPKNKARFSIPSMTQHHAGRYRCHYYSSAGWSEPSDPLELVMT
70 80 90 100 110
130 140 150 160 170
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLP------QHQSGEH
:.:.:: ::: . :. : :..: :.: . . .: : :::: .:: : .::
CCDS33 GFYNKPTLSALPSPVVASGGNMTLRCGSQK-GYHHFVLMKEGEHQLPRTLDSQQLHSGGF
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 PANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVA
: : .::: . . :: .:. .:..:: ::. ::..
CCDS33 QALFPVGPVTPSHRWRFTCYYYYTNTPWVWSHPSDPLEILPSGVSRKPSLLTLQGPVLAP
180 190 200 210 220 230
240 250 260 270 280
pF1KE2 GLVLVALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
CCDS33 GQSLTLQCGSDVGYDRFVLYKEGERDFLQRPGQQPQAGLSQANFTLGPVSRSYGGQYRCY
240 250 260 270 280 290
>>CCDS46175.1 LILRB3 gene_id:11025|Hs108|chr19 (632 aa)
initn: 504 init1: 147 opt: 426 Z-score: 483.6 bits: 98.5 E(32554): 1.3e-20
Smith-Waterman score: 426; 38.2% identity (58.6% similar) in 220 aa overlap (1-214:1-217)
10 20 30 40 50 60
pF1KE2 MDPKQTTLLCLVLCLGQRIQAQEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQL
: : :.:::: : :: : . : : :: : . :. . :: . : : ::. :: ::
CCDS46 MTPALTALLCLGLSLGPRTRMQAGPFPKPTLWAEPGSVISWGSPVTIWCQGSLEAQEYQL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT
:... . : . .. .: : : ..::::.:.: . . :: ::::.:
CCDS46 --DKEGSPEPWDRNNPLEPKNKARFSIPSMTQHHAGRYRCHYYSSAGWSEPSDPLELVMT
70 80 90 100 110
130 140 150 160 170
pF1KE2 GLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLP------QHQSGEH
:.:.:: ::: . :. : :..: :.: . . .: : :::: .:: : .::
CCDS46 GFYNKPTLSALPSPVVASGGNMTLRCGSQK-GYHHFVLMKEGEHQLPRTLDSQQLHSGGF
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 PANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQNLIRMAVA
: : .::: . . :: .:. .:..:: ::. ::..
CCDS46 QALFPVGPVTPSHRWRFTCYYYYTNTPWVWSHPSDPLEILPSGVSRKPSLLTLQGPVLAP
180 190 200 210 220 230
240 250 260 270 280
pF1KE2 GLVLVALLAILVENWHSHTALNKEASADVAEPSWSQQMCQPGLTFARTPSVCK
CCDS46 GQSLTLQCGSDVGYDRFVLYKEGERDFLQRPGQQPQAGLSQANFTLGPVSRSYGGQYRCY
240 250 260 270 280 290
287 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 00:24:10 2016 done: Mon Nov 7 00:24:10 2016
Total Scan time: 2.220 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]