Result of FASTA (ccds) for
pFN21AE2281
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2281, 843 aa
1>>>pF1KE2281 843 - 843 aa - 843 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.2231+/-0.000849; mu= 9.8696+/- 0.051
mean_var=215.5676+/-44.157, 0's: 0 Z-trim(114.0): 20 B-trim: 150 in 1/53
Lambda= 0.087354
statistics sampled from 14621 (14634) to 14621 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.759), E-opt: 0.2 (0.45), width: 16
Scan time: 3.930
The best scores are: opt bits E(32554)
CCDS72903.1 OTUD7B gene_id:56957|Hs108|chr1 ( 843) 5792 743.1 4.5e-214
CCDS10026.1 OTUD7A gene_id:161725|Hs108|chr15 ( 926) 2156 284.9 4.2e-76
>>CCDS72903.1 OTUD7B gene_id:56957|Hs108|chr1 (843 aa)
initn: 5792 init1: 5792 opt: 5792 Z-score: 3956.7 bits: 743.1 E(32554): 4.5e-214
Smith-Waterman score: 5792; 100.0% identity (100.0% similar) in 843 aa overlap (1-843:1-843)
10 20 30 40 50 60
pF1KE2 MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDVNAALSDFEQLRQVHAGNLPPSFSEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDVNAALSDFEQLRQVHAGNLPPSFSEGS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GGSRTPEKGFSDREPTRPPRPILQRQDDIVQEKRLSRGISHASSSIVSLARSHVSSNGGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 GGSRTPEKGFSDREPTRPPRPILQRQDDIVQEKRLSRGISHASSSIVSLARSHVSSNGGG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GGSNEHPLEMPICAFQLPDLTVYNEDFRSFIERDLIEQSMLVALEQAGRLNWWVSVDPTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 GGSNEHPLEMPICAFQLPDLTVYNEDFRSFIERDLIEQSMLVALEQAGRLNWWVSVDPTS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 QRLLPLATTGDGNCLLHAASLGMWGFHDRDLMLRKALYALMEKGVEKEALKRRWRWQQTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 QRLLPLATTGDGNCLLHAASLGMWGFHDRDLMLRKALYALMEKGVEKEALKRRWRWQQTQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 QNKESGLVYTEDEWQKEWNELIKLASSEPRMHLGTNGANCGGVESSEEPVYESLEEFHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 QNKESGLVYTEDEWQKEWNELIKLASSEPRMHLGTNGANCGGVESSEEPVYESLEEFHVF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 VLAHVLRRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPASQCHRSPLVLAYDQAHFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 VLAHVLRRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPASQCHRSPLVLAYDQAHFS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 ALVSMEQKENTKEQAVIPLTDSEYKLLPLHFAVDPGKGWEWGKDDSDNVRLASVILSLEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 ALVSMEQKENTKEQAVIPLTDSEYKLLPLHFAVDPGKGWEWGKDDSDNVRLASVILSLEV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 KLHLLHSYMNVKWIPLSSDAQAPLAQPESPTASAGDEPRSTPESGDSDKESVGSSSTSNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 KLHLLHSYMNVKWIPLSSDAQAPLAQPESPTASAGDEPRSTPESGDSDKESVGSSSTSNE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 GGRRKEKSKRDREKDKKRADSVANKLGSFGKTLGSKLKKNMGGLMHSKGSKPGGVGTGLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 GGRRKEKSKRDREKDKKRADSVANKLGSFGKTLGSKLKKNMGGLMHSKGSKPGGVGTGLG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 GSSGTETLEKKKKNSLKSWKGGKEEAAGDGPVSEKPPAESVGNGGSKYSQEVMQSLSILR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 GSSGTETLEKKKKNSLKSWKGGKEEAAGDGPVSEKPPAESVGNGGSKYSQEVMQSLSILR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 TAMQGEGKFIFVGTLKMGHRHQYQEEMIQRYLSDAEERFLAEQKQKEAERKIMNGGIGGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 TAMQGEGKFIFVGTLKMGHRHQYQEEMIQRYLSDAEERFLAEQKQKEAERKIMNGGIGGG
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 PPPAKKPEPDAREEQPTGPPAESRAMAFSTGYPGDFTIPRPSGGGVHCQEPRRQLAGGPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 PPPAKKPEPDAREEQPTGPPAESRAMAFSTGYPGDFTIPRPSGGGVHCQEPRRQLAGGPC
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE2 VGGLPPYATFPRQCPPGRPYPHQDSIPSLEPGSHSKDGLHRGALLPPPYRVADSYSNGYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 VGGLPPYATFPRQCPPGRPYPHQDSIPSLEPGSHSKDGLHRGALLPPPYRVADSYSNGYR
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE2 EPPEPDGWAGGLRGLPPTQTKCKQPNCSFYGHPETNNFCSCCYREELRRREREPDGELLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 EPPEPDGWAGGLRGLPPTQTKCKQPNCSFYGHPETNNFCSCCYREELRRREREPDGELLV
790 800 810 820 830 840
pF1KE2 HRF
:::
CCDS72 HRF
>>CCDS10026.1 OTUD7A gene_id:161725|Hs108|chr15 (926 aa)
initn: 2011 init1: 1246 opt: 2156 Z-score: 1479.7 bits: 284.9 E(32554): 4.2e-76
Smith-Waterman score: 2926; 61.7% identity (78.9% similar) in 786 aa overlap (1-757:23-781)
10 20 30
pF1KE2 MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDVNAAL
:::::::::::::::::::::::::::::::::..:::
CCDS10 MVSSVLPNPTSAECWAALLHDPMTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLTAAL
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE2 SDFEQLRQVHAGNLPPSFSEGSGGSRTPEKGFSDREPT---RPPRPILQRQDDIVQEKRL
::.:::::::..::: :.:: : . :: ::: . :: :::::::.:::::
CCDS10 SDYEQLRQVHTANLPHVFNEGRG-PKQPE-----REPQPGHKVERPCLQRQDDIAQEKRL
70 80 90 100 110
100 110 120 130 140 150
pF1KE2 SRGISHASSSIVSLARSHVSSNGGGGGSNEHPLEMPICAFQLPDLTVYNEDFRSFIERDL
:::::::::.:::::::::.:. .... :::::: .::::::.::.:::::::::::
CCDS10 SRGISHASSAIVSLARSHVASE---CNNEQFPLEMPIYTFQLPDLSVYSEDFRSFIERDL
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE2 IEQSMLVALEQAGRLNWWVSVDPTSQRLLPLATTGDGNCLLHAASLGMWGFHDRDLMLRK
:::. .:::::::::::: .: . .::::::::::::::::::::::::::::::.:::
CCDS10 IEQATMVALEQAGRLNWWSTVCTSCKRLLPLATTGDGNCLLHAASLGMWGFHDRDLVLRK
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE2 ALYALMEKGVEKEALKRRWRWQQTQQNKESGLVYTEDEWQKEWNELIKLASSEPRMHLGT
:::..:. :.:.::::::::::::::::: .::..::.::.:::::::: :..
CCDS10 ALYTMMRTGAEREALKRRWRWQQTQQNKE-------EEWEREWTELLKLASSEPRTHFSK
240 250 260 270 280
280 290 300 310 320 330
pF1KE2 NGANCGGVESSEEPVYESLEEFHVFVLAHVLRRPIVVVADTMLRDSGGEAFAPIPFGGIY
::.. :::..::.::::::::::::::::.::::::::::::::::::::::::::::::
CCDS10 NGGTGGGVDNSEDPVYESLEEFHVFVLAHILRRPIVVVADTMLRDSGGEAFAPIPFGGIY
290 300 310 320 330 340
340 350 360 370 380 390
pF1KE2 LPLEVPASQCHRSPLVLAYDQAHFSALVSMEQKENTKEQAVIPLTDSEYKLLPLHFAVDP
:::::: ..:: ::::::::::::::::::::... .:::::::::::.:::::::::::
CCDS10 LPLEVPPNRCHCSPLVLAYDQAHFSALVSMEQRDQQREQAVIPLTDSEHKLLPLHFAVDP
350 360 370 380 390 400
400 410 420 430 440 450
pF1KE2 GKGWEWGKDDSDNVRLASVILSLEVKLHLLHSYMNVKWIPLSSDAQAPLAQPESPTASAG
:: :::::::.::.::: .:::::.::.:::::::: :: . :...::::::::::::::
CCDS10 GKDWEWGKDDNDNARLAHLILSLEAKLNLLHSYMNVTWIRIPSETRAPLAQPESPTASAG
410 420 430 440 450 460
460 470 480 490 500 510
pF1KE2 DEPRSTPESGDSDKESVGSSSTSNEG--GRRKEKSKRDREKDKKRADSVANKLGSFGKTL
.. .: .: :::..:: :.:.::.: :. ::: :. .:::: ::::::::::::.:::
CCDS10 EDVQSLADSLDSDRDSVCSNSNSNNGKNGKDKEKEKQRKEKDKTRADSVANKLGSFSKTL
470 480 490 500 510 520
520 530 540 550 560 570
pF1KE2 GSKLKKNMGGLMHSKGSKPGGVGTGLGGSSGTETLEKKKKNSLKSWKGGKEEA---AGDG
: ::::::::: .: : .... .:..: .. :. :... :: ::.:::. :. .
CCDS10 GIKLKKNMGGLGGLVHGKMGRANSA-NGKNG-DSAERGKEKKAKSRKGSKEESGASASTS
530 540 550 560 570 580
580 590 600 610
pF1KE2 PVSEK----PPAESVG-----NGGS------KYSQEVMQSLSILRTAMQGEGKFIFVGTL
: ::: : ...: .::. ::: .: ::.:::.::::: ::::.: :
CCDS10 P-SEKTTPSPTDKAAGASPAEKGGGPRGDAWKYSTDVKLSLNILRAAMQGERKFIFAGLL
590 600 610 620 630 640
620 630 640 650 660 670
pF1KE2 KMGHRHQYQEEMIQRYLSDAEERFLAEQKQKEAERKIMNGGIGGGPPPAKKPEPDAREEQ
.::::..:::: ::..:.::: :::.:.. . .. ... . : : :. .
CCDS10 LTSHRHQFHEEMIGYYLTSAQERFSAEQEQRRRDAATAAAAAAAAAAATAKRPP--RRPE
650 660 670 680 690
680 690 700 710 720 730
pF1KE2 PTGPPAESRAMAFSTGYPGDFTIP---RPSGGGVHCQEPRRQLAGGPCVGGLPPYATFPR
: :. :: : : : .... ::: : . . : .: :: :.
CCDS10 TEGVPVPERA---SPGPPTQLVLKLKERPSPGPAAGRAARAAAGGTASPGGGARRAS--A
700 710 720 730 740 750
740 750 760 770 780
pF1KE2 QCP-PGR--PYPHQDSIPSLEPGSHSKDGLHRGALLPPPYRVADSYSNGYREPPEPDGWA
. : ::: : : ..:. .. .: ..:
CCDS10 SGPVPGRSPPAPARQSVIHVQ-ASGARDEACAPAVGALRPCATYPQQNRSLSSQSYSPAR
760 770 780 790 800 810
843 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 06:13:11 2016 done: Sun Nov 6 06:13:12 2016
Total Scan time: 3.930 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]