Result of FASTA (omim) for
pFN21AE2238
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2238, 332 aa
1>>>pF1KE2238 332 - 332 aa - 332 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7837+/-0.000471; mu= 14.4175+/- 0.029
mean_var=97.1852+/-20.155, 0's: 0 Z-trim(111.1): 105 B-trim: 315 in 1/50
Lambda= 0.130099
statistics sampled from 19453 (19569) to 19453 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.595), E-opt: 0.2 (0.229), width: 16
Scan time: 5.690
The best scores are: opt bits E(85289)
NP_001171643 (OMIM: 606446) SLAM family member 6 i ( 332) 2141 412.6 6.1e-115
NP_443163 (OMIM: 606446) SLAM family member 6 isof ( 331) 2124 409.4 5.5e-114
XP_016855704 (OMIM: 606446) PREDICTED: SLAM family ( 335) 2058 397.0 3e-110
XP_016855705 (OMIM: 606446) PREDICTED: SLAM family ( 283) 1723 334.0 2.2e-91
NP_001171644 (OMIM: 606446) SLAM family member 6 i ( 282) 1706 330.8 2e-90
NP_001171645 (OMIM: 606446) SLAM family member 6 i ( 221) 1314 257.2 2.4e-68
XP_016855706 (OMIM: 606446) PREDICTED: SLAM family ( 220) 1297 254.0 2.2e-67
NP_001317671 (OMIM: 604513) SLAM family member 5 i ( 339) 465 98.0 3.1e-20
NP_003865 (OMIM: 604513) SLAM family member 5 isof ( 328) 454 95.9 1.3e-19
NP_001171810 (OMIM: 604513) SLAM family member 5 i ( 272) 435 92.3 1.3e-18
NP_001171808 (OMIM: 604513) SLAM family member 5 i ( 345) 435 92.4 1.5e-18
NP_067004 (OMIM: 606625) SLAM family member 7 isof ( 335) 399 85.6 1.6e-16
XP_016856793 (OMIM: 600684) PREDICTED: T-lymphocyt ( 504) 385 83.1 1.4e-15
NP_254273 (OMIM: 608589) SLAM family member 9 isof ( 289) 377 81.4 2.5e-15
XP_016858245 (OMIM: 608589) PREDICTED: SLAM family ( 319) 377 81.4 2.7e-15
NP_001269521 (OMIM: 606625) SLAM family member 7 i ( 296) 345 75.4 1.7e-13
NP_001248386 (OMIM: 600684) T-lymphocyte surface a ( 565) 338 74.3 6.7e-13
XP_011507862 (OMIM: 600684) PREDICTED: T-lymphocyt ( 598) 338 74.3 7e-13
XP_016856792 (OMIM: 600684) PREDICTED: T-lymphocyt ( 607) 338 74.4 7.1e-13
XP_011507858 (OMIM: 600684) PREDICTED: T-lymphocyt ( 612) 338 74.4 7.2e-13
XP_016856791 (OMIM: 600684) PREDICTED: T-lymphocyt ( 621) 338 74.4 7.2e-13
NP_001248385 (OMIM: 600684) T-lymphocyte surface a ( 641) 338 74.4 7.4e-13
NP_002339 (OMIM: 600684) T-lymphocyte surface anti ( 655) 338 74.4 7.5e-13
XP_016856790 (OMIM: 600684) PREDICTED: T-lymphocyt ( 664) 338 74.4 7.6e-13
XP_011507854 (OMIM: 600684) PREDICTED: T-lymphocyt ( 679) 338 74.4 7.7e-13
XP_016856788 (OMIM: 600684) PREDICTED: T-lymphocyt ( 688) 338 74.4 7.8e-13
XP_016856787 (OMIM: 600684) PREDICTED: T-lymphocyt ( 697) 338 74.4 7.9e-13
XP_011507852 (OMIM: 600684) PREDICTED: T-lymphocyt ( 701) 338 74.4 7.9e-13
XP_011507851 (OMIM: 600684) PREDICTED: T-lymphocyt ( 702) 338 74.4 7.9e-13
XP_011507850 (OMIM: 600684) PREDICTED: T-lymphocyt ( 703) 338 74.4 7.9e-13
XP_016856786 (OMIM: 600684) PREDICTED: T-lymphocyt ( 711) 338 74.4 8e-13
XP_016856789 (OMIM: 600684) PREDICTED: T-lymphocyt ( 678) 331 73.1 1.9e-12
XP_011508131 (OMIM: 606625) PREDICTED: SLAM family ( 309) 323 71.3 3e-12
XP_011508130 (OMIM: 606625) PREDICTED: SLAM family ( 348) 323 71.3 3.3e-12
NP_001269519 (OMIM: 606625) SLAM family member 7 i ( 228) 253 58.1 2.2e-08
XP_011508397 (OMIM: 604513) PREDICTED: SLAM family ( 225) 245 56.5 6.1e-08
NP_001269524 (OMIM: 606625) SLAM family member 7 i ( 201) 244 56.3 6.3e-08
NP_001171811 (OMIM: 604513) SLAM family member 5 i ( 214) 234 54.5 2.4e-07
NP_001139644 (OMIM: 608589) SLAM family member 9 i ( 198) 222 52.2 1.1e-06
XP_016857619 (OMIM: 603492) PREDICTED: signaling l ( 338) 211 50.3 6.9e-06
NP_001317683 (OMIM: 603492) signaling lymphocytic ( 357) 211 50.3 7.2e-06
NP_001028839 (OMIM: 600684) T-lymphocyte surface a ( 193) 204 48.8 1.1e-05
NP_057466 (OMIM: 180300,605554) natural killer cel ( 365) 204 49.0 1.8e-05
NP_001269525 (OMIM: 606625) SLAM family member 7 i ( 189) 199 47.8 2.1e-05
XP_011507924 (OMIM: 180300,605554) PREDICTED: natu ( 329) 202 48.6 2.2e-05
NP_003028 (OMIM: 603492) signaling lymphocytic act ( 335) 202 48.6 2.2e-05
NP_001160135 (OMIM: 180300,605554) natural killer ( 370) 193 47.0 7.6e-05
XP_011507923 (OMIM: 180300,605554) PREDICTED: natu ( 334) 191 46.6 9.2e-05
NP_001269522 (OMIM: 606625) SLAM family member 7 i ( 149) 181 44.4 0.00018
XP_005245513 (OMIM: 603492) PREDICTED: signaling l ( 305) 183 45.0 0.00024
>>NP_001171643 (OMIM: 606446) SLAM family member 6 isofo (332 aa)
initn: 2141 init1: 2141 opt: 2141 Z-score: 2184.6 bits: 412.6 E(85289): 6.1e-115
Smith-Waterman score: 2141; 100.0% identity (100.0% similar) in 332 aa overlap (1-332:1-332)
10 20 30 40 50 60
pF1KE2 MLWLFQSLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLWLFQSLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNET
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 SLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 VSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVSGICIVFGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVSGICIVFGF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 IILLLLVLRKRRDSLSLSTQRTQGPAESARNLEYVSVSPTNNTVYASVTHSNRETEIWTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IILLLLVLRKRRDSLSLSTQRTQGPAESARNLEYVSVSPTNNTVYASVTHSNRETEIWTP
250 260 270 280 290 300
310 320 330
pF1KE2 RENDTITIYSTINHSKESKPTFSRATALDNVV
::::::::::::::::::::::::::::::::
NP_001 RENDTITIYSTINHSKESKPTFSRATALDNVV
310 320 330
>>NP_443163 (OMIM: 606446) SLAM family member 6 isoform (331 aa)
initn: 1723 init1: 1723 opt: 2124 Z-score: 2167.4 bits: 409.4 E(85289): 5.5e-114
Smith-Waterman score: 2124; 99.7% identity (99.7% similar) in 332 aa overlap (1-332:1-331)
10 20 30 40 50 60
pF1KE2 MLWLFQSLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 MLWLFQSLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNET
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 SLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 SLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 SYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 VSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVSGICIVFGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 VSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVSGICIVFGF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 IILLLLVLRKRRDSLSLSTQRTQGPAESARNLEYVSVSPTNNTVYASVTHSNRETEIWTP
::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
NP_443 IILLLLVLRKRRDSLSLSTQRTQGP-ESARNLEYVSVSPTNNTVYASVTHSNRETEIWTP
250 260 270 280 290
310 320 330
pF1KE2 RENDTITIYSTINHSKESKPTFSRATALDNVV
::::::::::::::::::::::::::::::::
NP_443 RENDTITIYSTINHSKESKPTFSRATALDNVV
300 310 320 330
>>XP_016855704 (OMIM: 606446) PREDICTED: SLAM family mem (335 aa)
initn: 2094 init1: 2058 opt: 2058 Z-score: 2100.3 bits: 397.0 E(85289): 3e-110
Smith-Waterman score: 2058; 99.4% identity (99.7% similar) in 320 aa overlap (1-320:1-320)
10 20 30 40 50 60
pF1KE2 MLWLFQSLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLWLFQSLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNET
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 SLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 VSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVSGICIVFGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVSGICIVFGF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 IILLLLVLRKRRDSLSLSTQRTQGPAESARNLEYVSVSPTNNTVYASVTHSNRETEIWTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IILLLLVLRKRRDSLSLSTQRTQGPAESARNLEYVSVSPTNNTVYASVTHSNRETEIWTP
250 260 270 280 290 300
310 320 330
pF1KE2 RENDTITIYSTINHSKESKPTFSRATALDNVV
::::::::::::::::: .:
XP_016 RENDTITIYSTINHSKEVSPRLLHVFIFLPLSTDL
310 320 330
>>XP_016855705 (OMIM: 606446) PREDICTED: SLAM family mem (283 aa)
initn: 1816 init1: 1708 opt: 1723 Z-score: 1761.5 bits: 334.0 E(85289): 2.2e-91
Smith-Waterman score: 1723; 95.8% identity (96.8% similar) in 285 aa overlap (53-332:1-283)
30 40 50 60 70
pF1KE2 SSLTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFI-----VPHETKSPEIHV
. :::. :: :. ::::::::::::
XP_016 MLWLFQ--SLLFVFCFGPVPHETKSPEIHV
10 20
80 90 100 110 120 130
pF1KE2 TNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTN
30 40 50 60 70 80
140 150 160 170 180 190
pF1KE2 HSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLTVSWDPRISSEQDYTCIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLTVSWDPRISSEQDYTCIA
90 100 110 120 130 140
200 210 220 230 240 250
pF1KE2 ENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVSGICIVFGFIILLLLVLRKRRDSLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVSGICIVFGFIILLLLVLRKRRDSLSL
150 160 170 180 190 200
260 270 280 290 300 310
pF1KE2 STQRTQGPAESARNLEYVSVSPTNNTVYASVTHSNRETEIWTPRENDTITIYSTINHSKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STQRTQGPAESARNLEYVSVSPTNNTVYASVTHSNRETEIWTPRENDTITIYSTINHSKE
210 220 230 240 250 260
320 330
pF1KE2 SKPTFSRATALDNVV
:::::::::::::::
XP_016 SKPTFSRATALDNVV
270 280
>>NP_001171644 (OMIM: 606446) SLAM family member 6 isofo (282 aa)
initn: 1398 init1: 1290 opt: 1706 Z-score: 1744.3 bits: 330.8 E(85289): 2e-90
Smith-Waterman score: 1706; 95.4% identity (96.5% similar) in 285 aa overlap (53-332:1-282)
30 40 50 60 70
pF1KE2 SSLTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFI-----VPHETKSPEIHV
. :::. :: :. ::::::::::::
NP_001 MLWLFQ--SLLFVFCFGPVPHETKSPEIHV
10 20
80 90 100 110 120 130
pF1KE2 TNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTN
30 40 50 60 70 80
140 150 160 170 180 190
pF1KE2 HSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLTVSWDPRISSEQDYTCIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLTVSWDPRISSEQDYTCIA
90 100 110 120 130 140
200 210 220 230 240 250
pF1KE2 ENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVSGICIVFGFIILLLLVLRKRRDSLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVSGICIVFGFIILLLLVLRKRRDSLSL
150 160 170 180 190 200
260 270 280 290 300 310
pF1KE2 STQRTQGPAESARNLEYVSVSPTNNTVYASVTHSNRETEIWTPRENDTITIYSTINHSKE
:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STQRTQGP-ESARNLEYVSVSPTNNTVYASVTHSNRETEIWTPRENDTITIYSTINHSKE
210 220 230 240 250 260
320 330
pF1KE2 SKPTFSRATALDNVV
:::::::::::::::
NP_001 SKPTFSRATALDNVV
270 280
>>NP_001171645 (OMIM: 606446) SLAM family member 6 isofo (221 aa)
initn: 1314 init1: 1314 opt: 1314 Z-score: 1348.1 bits: 257.2 E(85289): 2.4e-68
Smith-Waterman score: 1314; 100.0% identity (100.0% similar) in 204 aa overlap (129-332:18-221)
100 110 120 130 140 150
pF1KE2 LKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDA
::::::::::::::::::::::::::::::
NP_001 MLWLFQSLLFVFCFGPGQLRNIQVTNHSQLFQNMTCELHLTCSVEDA
10 20 30 40
160 170 180 190 200 210
pF1KE2 DDNVSFRWEALGNTLSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDNVSFRWEALGNTLSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVK
50 60 70 80 90 100
220 230 240 250 260 270
pF1KE2 IQYTDTKMILFMVSGICIVFGFIILLLLVLRKRRDSLSLSTQRTQGPAESARNLEYVSVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IQYTDTKMILFMVSGICIVFGFIILLLLVLRKRRDSLSLSTQRTQGPAESARNLEYVSVS
110 120 130 140 150 160
280 290 300 310 320 330
pF1KE2 PTNNTVYASVTHSNRETEIWTPRENDTITIYSTINHSKESKPTFSRATALDNVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTNNTVYASVTHSNRETEIWTPRENDTITIYSTINHSKESKPTFSRATALDNVV
170 180 190 200 210 220
>>XP_016855706 (OMIM: 606446) PREDICTED: SLAM family mem (220 aa)
initn: 896 init1: 896 opt: 1297 Z-score: 1330.9 bits: 254.0 E(85289): 2.2e-67
Smith-Waterman score: 1297; 99.5% identity (99.5% similar) in 204 aa overlap (129-332:18-220)
100 110 120 130 140 150
pF1KE2 LKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDA
::::::::::::::::::::::::::::::
XP_016 MLWLFQSLLFVFCFGPGQLRNIQVTNHSQLFQNMTCELHLTCSVEDA
10 20 30 40
160 170 180 190 200 210
pF1KE2 DDNVSFRWEALGNTLSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDNVSFRWEALGNTLSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVK
50 60 70 80 90 100
220 230 240 250 260 270
pF1KE2 IQYTDTKMILFMVSGICIVFGFIILLLLVLRKRRDSLSLSTQRTQGPAESARNLEYVSVS
::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
XP_016 IQYTDTKMILFMVSGICIVFGFIILLLLVLRKRRDSLSLSTQRTQGP-ESARNLEYVSVS
110 120 130 140 150 160
280 290 300 310 320 330
pF1KE2 PTNNTVYASVTHSNRETEIWTPRENDTITIYSTINHSKESKPTFSRATALDNVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTNNTVYASVTHSNRETEIWTPRENDTITIYSTINHSKESKPTFSRATALDNVV
170 180 190 200 210 220
>>NP_001317671 (OMIM: 604513) SLAM family member 5 isofo (339 aa)
initn: 274 init1: 105 opt: 465 Z-score: 484.4 bits: 98.0 E(85289): 3.1e-20
Smith-Waterman score: 465; 30.7% identity (64.9% similar) in 319 aa overlap (2-312:6-313)
10 20 30 40 50
pF1KE2 MLWLFQSLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEKVNFITWL
::. ::. . : . ..: . . ::::::::::.:... ..:..:.:
NP_001 MAQHHLWI---LLLCLQTWPEAAGKDSEI--FTVNGILGESVTFPVNIQEPRQVKIIAWT
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 FNETSLAFIVPHETKS-PEIHVTNPKQGKRLN-FTQSYSLQLSNLKMEDTGSYRAQISTK
..::.:...: .... : . ::. . .:.. . .:.: .:.:.:::.:.:.:.:.:.
NP_001 -SKTSVAYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 TSAKLSS--YTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNT
.. .. :.:.: :.: . ..:. . : ::.. :::::: . ::.. : ::.
NP_001 ADPYTTTKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 LSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVS
. : . :. ..: ::: :.: ::: : :.::..:: :. . . . :. :
NP_001 GNV---LQIFQTPE-DQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVL
180 190 200 210 220 230
240 250 260 270 280
pF1KE2 GICIVFGFII--LLLLVLRKRRDSLSLSTQRTQGPAESARNLEYVSVSPTNNTVYAS--V
.. ... .:. ..:. : :::.. :.: :..: .... :. . . :: : .
NP_001 AMFFLLVLILSSVFLFRLFKRRQGSCLNT-FTKNPYAASKKTIYTYIMASRNTQPAESRI
240 250 260 270 280
290 300 310 320 330
pF1KE2 THSNRETEIWTPRENDTITIYSTINHSKESKPTFSRATALDNVV
.... .:. . :.:: .
NP_001 YDEILQSKVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
290 300 310 320 330
>>NP_003865 (OMIM: 604513) SLAM family member 5 isoform (328 aa)
initn: 288 init1: 119 opt: 454 Z-score: 473.4 bits: 95.9 E(85289): 1.3e-19
Smith-Waterman score: 454; 30.2% identity (64.5% similar) in 318 aa overlap (2-312:6-302)
10 20 30 40 50
pF1KE2 MLWLFQSLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEKVNFITWL
::. ::. . : . ..: . . ::::::::::.:... ..:..:.:
NP_003 MAQHHLWI---LLLCLQTWPEAAGKDSEI--FTVNGILGESVTFPVNIQEPRQVKIIAWT
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 FNETSLAFIVPHETKS-PEIHVTNPKQGKRLN-FTQSYSLQLSNLKMEDTGSYRAQISTK
..::.:...: .... : . ::. . .:.. . .:.: .:.:.:::.:.:.:.:.:.
NP_003 -SKTSVAYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 TSAKLSS--YTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNT
.. .. :.:.: :.: . ..:. . : ::.. :::::: . ::.. : ::.
NP_003 ADPYTTTKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 LSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVS
. : . :. ..: ::: :.: ::: : :.::..:: :. . . . :. :
NP_003 GNV---LQIFQTPE-DQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVL
180 190 200 210 220 230
240 250 260 270 280
pF1KE2 GICIVFGFI---ILLLLVLRKRRDSLSLSTQRTQGPAESARNLEYVSVSPTNNTVYASVT
.. ... .: ..:. ....:.:. : .: : ..:: . :... .: .
NP_003 AMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTY--IMASRNTQ-----PAESRIYDEIL
240 250 260 270 280
290 300 310 320 330
pF1KE2 HSNRETEIWTPRENDTITIYSTINHSKESKPTFSRATALDNVV
.: .. .:. . :.:: .
NP_003 QS----KVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
290 300 310 320
>>NP_001171810 (OMIM: 604513) SLAM family member 5 isofo (272 aa)
initn: 195 init1: 115 opt: 435 Z-score: 455.2 bits: 92.3 E(85289): 1.3e-18
Smith-Waterman score: 435; 32.8% identity (67.5% similar) in 268 aa overlap (2-263:6-263)
10 20 30 40 50
pF1KE2 MLWLFQSLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEKVNFITWL
::. ::. . : . ..: . . ::::::::::.:... ..:..:.:
NP_001 MAQHHLWI---LLLCLQTWPEAAGKDSEI--FTVNGILGESVTFPVNIQEPRQVKIIAWT
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 FNETSLAFIVPHETKS-PEIHVTNPKQGKRLN-FTQSYSLQLSNLKMEDTGSYRAQISTK
..::.:...: .... : . ::. . .:.. . .:.: .:.:.:::.:.:.:.:.:.
NP_001 -SKTSVAYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 TSAKLSS--YTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNT
.. .. :.:.: :.: . ..:. . : ::.. :::::: . ::.. : ::.
NP_001 ADPYTTTKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 LSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVS
. : . :. ..: ::: :.: ::: : :.::..:: :. . . . :. :
NP_001 GNV---LQIFQTPE-DQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE2 GICIVFGFII--LLLLVLRKRRDSLSLSTQRTQGPAESARNLEYVSVSPTNNTVYASVTH
.. ... .:. ..:. : :::.. ::. . ..
NP_001 AMFFLLVLILSSVFLFRLFKRRQGASLQGRASEHSLFRSAVC
240 250 260 270
300 310 320 330
pF1KE2 SNRETEIWTPRENDTITIYSTINHSKESKPTFSRATALDNVV
332 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 21:49:03 2016 done: Sun Nov 6 21:49:04 2016
Total Scan time: 5.690 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]