FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2221, 335 aa
  1>>>pF1KE2221 335 - 335 aa - 335 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.9441+/-0.000706; mu= 17.5878+/- 0.043
 mean_var=58.8601+/-11.977, 0's: 0 Z-trim(108.7): 19  B-trim: 0 in 0/48
 Lambda= 0.167172
 statistics sampled from 10368 (10379) to 10368 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.698), E-opt: 0.2 (0.319), width:  16
 Scan time:  2.740

The best scores are:                                      opt bits E(32554)
CCDS5822.1 MEST gene_id:4232|Hs108|chr7            ( 335) 2299 562.6 1.7e-160
CCDS5823.1 MEST gene_id:4232|Hs108|chr7            ( 326) 2239 548.1 3.7e-156
CCDS59081.1 MEST gene_id:4232|Hs108|chr7           ( 292) 1415 349.3 2.2e-96


>>CCDS5822.1 MEST gene_id:4232|Hs108|chr7                 (335 aa)
 initn: 2299 init1: 2299 opt: 2299  Z-score: 2995.1  bits: 562.6 E(32554): 1.7e-160
Smith-Waterman score: 2299; 100.0% identity (100.0% similar) in 335 aa overlap (1-335:1-335)

               10        20        30        40        50        60
pF1KE2 MVRRDRLRRMREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MVRRDRLRRMREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 DSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRPHHYSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRPHHYSI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 FEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRYKQNRSGRLTIKSLCLSNGGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRYKQNRSGRLTIKSLCLSNGGI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 FPETHRPLLLQKLLKDGGVLSPILTRLMNFFVFSRGLTPVFGPYTRPSESELWDMWAGIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FPETHRPLLLQKLLKDGGVLSPILTRLMNFFVFSRGLTPVFGPYTRPSESELWDMWAGIR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 NNDGNLVIDSLLQYINQRKKFRRRWVGALASVTIPIHFIYGPLDPVNPYPEFLELYRKTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NNDGNLVIDSLLQYINQRKKFRRRWVGALASVTIPIHFIYGPLDPVNPYPEFLELYRKTL
              250       260       270       280       290       300

              310       320       330     
pF1KE2 PRSTVSILDDHISHYPQLEDPMGFLNAYMGFINSF
       :::::::::::::::::::::::::::::::::::
CCDS58 PRSTVSILDDHISHYPQLEDPMGFLNAYMGFINSF
              310       320       330     

>>CCDS5823.1 MEST gene_id:4232|Hs108|chr7                 (326 aa)
 initn: 2239 init1: 2239 opt: 2239  Z-score: 2917.1  bits: 548.1 E(32554): 3.7e-156
Smith-Waterman score: 2239; 100.0% identity (100.0% similar) in 326 aa overlap (10-335:1-326)

               10        20        30        40        50        60
pF1KE2 MVRRDRLRRMREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQ
                :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58          MREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQ
                        10        20        30        40        50 

               70        80        90       100       110       120
pF1KE2 DSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRPHHYSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRPHHYSI
              60        70        80        90       100       110 

              130       140       150       160       170       180
pF1KE2 FEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRYKQNRSGRLTIKSLCLSNGGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRYKQNRSGRLTIKSLCLSNGGI
             120       130       140       150       160       170 

              190       200       210       220       230       240
pF1KE2 FPETHRPLLLQKLLKDGGVLSPILTRLMNFFVFSRGLTPVFGPYTRPSESELWDMWAGIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FPETHRPLLLQKLLKDGGVLSPILTRLMNFFVFSRGLTPVFGPYTRPSESELWDMWAGIR
             180       190       200       210       220       230 

              250       260       270       280       290       300
pF1KE2 NNDGNLVIDSLLQYINQRKKFRRRWVGALASVTIPIHFIYGPLDPVNPYPEFLELYRKTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NNDGNLVIDSLLQYINQRKKFRRRWVGALASVTIPIHFIYGPLDPVNPYPEFLELYRKTL
             240       250       260       270       280       290 

              310       320       330     
pF1KE2 PRSTVSILDDHISHYPQLEDPMGFLNAYMGFINSF
       :::::::::::::::::::::::::::::::::::
CCDS58 PRSTVSILDDHISHYPQLEDPMGFLNAYMGFINSF
             300       310       320      

>>CCDS59081.1 MEST gene_id:4232|Hs108|chr7                (292 aa)
 initn: 1415 init1: 1415 opt: 1415  Z-score: 1843.8  bits: 349.3 E(32554): 2.2e-96
Smith-Waterman score: 1918; 89.6% identity (89.6% similar) in 326 aa overlap (10-335:1-292)

               10        20        30        40        50        60
pF1KE2 MVRRDRLRRMREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQ
                :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59          MREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQ
                        10        20        30        40        50 

               70        80        90       100       110       120
pF1KE2 DSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRPHHYSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 DSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRPHHYSI
              60        70        80        90       100       110 

              130       140       150       160       170       180
pF1KE2 FEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRYKQNRSGRLTIKSLCLSNGGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 FEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRYKQNRSGRLTIKSLCLSNGGI
             120       130       140       150       160       170 

              190       200       210       220       230       240
pF1KE2 FPETHRPLLLQKLLKDGGVLSPILTRLMNFFVFSRGLTPVFGPYTRPSESELWDMWAGIR
       :::::::::::::::::::::::::::::::::::::                       
CCDS59 FPETHRPLLLQKLLKDGGVLSPILTRLMNFFVFSRGL-----------------------
             180       190       200                               

              250       260       270       280       290       300
pF1KE2 NNDGNLVIDSLLQYINQRKKFRRRWVGALASVTIPIHFIYGPLDPVNPYPEFLELYRKTL
                  :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 -----------LQYINQRKKFRRRWVGALASVTIPIHFIYGPLDPVNPYPEFLELYRKTL
                 210       220       230       240       250       

              310       320       330     
pF1KE2 PRSTVSILDDHISHYPQLEDPMGFLNAYMGFINSF
       :::::::::::::::::::::::::::::::::::
CCDS59 PRSTVSILDDHISHYPQLEDPMGFLNAYMGFINSF
       260       270       280       290  




335 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 01:46:20 2016 done: Mon Nov  7 01:46:20 2016
 Total Scan time:  2.740 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]