Result of FASTA (ccds) for
pFN21AE2210
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2210, 879 aa
1>>>pF1KE2210 879 - 879 aa - 879 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4047+/-0.00128; mu= 15.9612+/- 0.077
mean_var=96.7225+/-19.008, 0's: 0 Z-trim(102.3): 28 B-trim: 40 in 2/51
Lambda= 0.130410
statistics sampled from 6874 (6879) to 6874 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.552), E-opt: 0.2 (0.211), width: 16
Scan time: 3.740
The best scores are: opt bits E(32554)
CCDS3503.1 EXOC1 gene_id:55763|Hs108|chr4 ( 879) 5702 1084.2 0
CCDS3502.1 EXOC1 gene_id:55763|Hs108|chr4 ( 894) 2892 555.6 1.5e-157
>>CCDS3503.1 EXOC1 gene_id:55763|Hs108|chr4 (879 aa)
initn: 5702 init1: 5702 opt: 5702 Z-score: 5799.5 bits: 1084.2 E(32554): 0
Smith-Waterman score: 5702; 100.0% identity (100.0% similar) in 879 aa overlap (1-879:1-879)
10 20 30 40 50 60
pF1KE2 MTAIKHALQRDIFTPNDERLLSIVNVCKAGKKKKNCFLCATVTTERPVQVKVVKVKKSDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MTAIKHALQRDIFTPNDERLLSIVNVCKAGKKKKNCFLCATVTTERPVQVKVVKVKKSDK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GDFYKRQIAWALRDLAVVDAKDAIKENPEFDLHFEKIYKWVASSTAEKNAFISCIWKLNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 GDFYKRQIAWALRDLAVVDAKDAIKENPEFDLHFEKIYKWVASSTAEKNAFISCIWKLNQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 RYLRKKIDFVNVSSQLLEESVPSGENQSVTGGDEEVVDEYQELNAREEQDIEIMMEGCEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 RYLRKKIDFVNVSSQLLEESVPSGENQSVTGGDEEVVDEYQELNAREEQDIEIMMEGCEY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 AISNAEAFAEKLSRELQVLDGANIQSIMASEKQVNILMKLLDEALKEVDQIELKLSSYEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AISNAEAFAEKLSRELQVLDGANIQSIMASEKQVNILMKLLDEALKEVDQIELKLSSYEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 MLQSVKEQMDQISESNHLIHLSNTNNVKLLSEIEFLVNHMDLAKGHIKALQEGDLASSRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MLQSVKEQMDQISESNHLIHLSNTNNVKLLSEIEFLVNHMDLAKGHIKALQEGDLASSRG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 IEACTNAADALLQCMNVALRPGHDLLLAVKQQQQRFSDLRELFARRLASHLNNVFVQQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 IEACTNAADALLQCMNVALRPGHDLLLAVKQQQQRFSDLRELFARRLASHLNNVFVQQGH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 DQSSTLAQHSVELTLPNHHPFHRDLLRYAKLMEWLKSTDYGKYEGLTKNYMDYLSRLYER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DQSSTLAQHSVELTLPNHHPFHRDLLRYAKLMEWLKSTDYGKYEGLTKNYMDYLSRLYER
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 EIKDFFEVAKIKMTGTTKESKKFGLHGSSGKLTGSTSSLNKLSVQSSGNRRSQSSSLLDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 EIKDFFEVAKIKMTGTTKESKKFGLHGSSGKLTGSTSSLNKLSVQSSGNRRSQSSSLLDM
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 GNMSASDLDVADRTKFDKIFEQVLSELEPLCLAEQDFISKFFKLQQHQSMPGTMAEAEDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 GNMSASDLDVADRTKFDKIFEQVLSELEPLCLAEQDFISKFFKLQQHQSMPGTMAEAEDL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 DGGTLSRQHNCGTPLPVSSEKDMIRQMMIKIFRCIEPELNNLIALGDKIDSFNSLYMLVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DGGTLSRQHNCGTPLPVSSEKDMIRQMMIKIFRCIEPELNNLIALGDKIDSFNSLYMLVK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 MSHHVWTAQNVDPASFLSTTLGNVLVTVKRNFDKCISNQIRQMEEVKISKKSKVGILPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MSHHVWTAQNVDPASFLSTTLGNVLVTVKRNFDKCISNQIRQMEEVKISKKSKVGILPFV
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 AEFEEFAGLAESIFKNAERRGDLDKAYTKLIRGVFVNVEKVANESQKTPRDVVMMENFHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AEFEEFAGLAESIFKNAERRGDLDKAYTKLIRGVFVNVEKVANESQKTPRDVVMMENFHH
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE2 IFATLSRLKISCLEAEKKEAKQKYTDHLQSYVIYSLGQPLEKLNHFFEGVEARVAQGIRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 IFATLSRLKISCLEAEKKEAKQKYTDHLQSYVIYSLGQPLEKLNHFFEGVEARVAQGIRE
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE2 EEVSYQLAFNKQELRKVIKEYPGKEVKKGLDNLYKKVDKHLCEEENLLQVVWHSMQDEFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 EEVSYQLAFNKQELRKVIKEYPGKEVKKGLDNLYKKVDKHLCEEENLLQVVWHSMQDEFI
790 800 810 820 830 840
850 860 870
pF1KE2 RQYKHFEGLIARCYPGSGVTMEFTIQDILDYCSSIAQSH
:::::::::::::::::::::::::::::::::::::::
CCDS35 RQYKHFEGLIARCYPGSGVTMEFTIQDILDYCSSIAQSH
850 860 870
>>CCDS3502.1 EXOC1 gene_id:55763|Hs108|chr4 (894 aa)
initn: 5680 init1: 2857 opt: 2892 Z-score: 2942.2 bits: 555.6 E(32554): 1.5e-157
Smith-Waterman score: 5654; 98.2% identity (98.3% similar) in 894 aa overlap (1-879:1-894)
10 20 30 40 50 60
pF1KE2 MTAIKHALQRDIFTPNDERLLSIVNVCKAGKKKKNCFLCATVTTERPVQVKVVKVKKSDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MTAIKHALQRDIFTPNDERLLSIVNVCKAGKKKKNCFLCATVTTERPVQVKVVKVKKSDK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 GDFYKRQIAWALRDLAVVDAKDAIKENPEFDLHFEKIYKWVASSTAEKNAFISCIWKLNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 GDFYKRQIAWALRDLAVVDAKDAIKENPEFDLHFEKIYKWVASSTAEKNAFISCIWKLNQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 RYLRKKIDFVNVSSQLLEESVPSGENQSVTGGDEEVVDEYQELNAREEQDIEIMMEGCEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 RYLRKKIDFVNVSSQLLEESVPSGENQSVTGGDEEVVDEYQELNAREEQDIEIMMEGCEY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 AISNAEAFAEKLSRELQVLDGANIQSIMASEKQVNILMKLLDEALKEVDQIELKLSSYEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AISNAEAFAEKLSRELQVLDGANIQSIMASEKQVNILMKLLDEALKEVDQIELKLSSYEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 MLQSVKEQMDQISESNHLIHLSNTNNVKLLSEIEFLVNHMDLAKGHIKALQEGDLASSRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MLQSVKEQMDQISESNHLIHLSNTNNVKLLSEIEFLVNHMDLAKGHIKALQEGDLASSRG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 IEACTNAADALLQCMNVALRPGHDLLLAVKQQQQRFSDLRELFARRLASHLNNVFVQQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 IEACTNAADALLQCMNVALRPGHDLLLAVKQQQQRFSDLRELFARRLASHLNNVFVQQGH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 DQSSTLAQHSVELTLPNHHPFHRDLLRYAKLMEWLKSTDYGKYEGLTKNYMDYLSRLYER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DQSSTLAQHSVELTLPNHHPFHRDLLRYAKLMEWLKSTDYGKYEGLTKNYMDYLSRLYER
370 380 390 400 410 420
430 440 450 460
pF1KE2 EIKDFFEVAKIKMTGTTKESKKFG---------------LHGSSGKLTGSTSSLNKLSVQ
:::::::::::::::::::::::. :::::::::::::::::::::
CCDS35 EIKDFFEVAKIKMTGTTKESKKFATLPRKESAVKQETESLHGSSGKLTGSTSSLNKLSVQ
430 440 450 460 470 480
470 480 490 500 510 520
pF1KE2 SSGNRRSQSSSLLDMGNMSASDLDVADRTKFDKIFEQVLSELEPLCLAEQDFISKFFKLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 SSGNRRSQSSSLLDMGNMSASDLDVADRTKFDKIFEQVLSELEPLCLAEQDFISKFFKLQ
490 500 510 520 530 540
530 540 550 560 570 580
pF1KE2 QHQSMPGTMAEAEDLDGGTLSRQHNCGTPLPVSSEKDMIRQMMIKIFRCIEPELNNLIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 QHQSMPGTMAEAEDLDGGTLSRQHNCGTPLPVSSEKDMIRQMMIKIFRCIEPELNNLIAL
550 560 570 580 590 600
590 600 610 620 630 640
pF1KE2 GDKIDSFNSLYMLVKMSHHVWTAQNVDPASFLSTTLGNVLVTVKRNFDKCISNQIRQMEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 GDKIDSFNSLYMLVKMSHHVWTAQNVDPASFLSTTLGNVLVTVKRNFDKCISNQIRQMEE
610 620 630 640 650 660
650 660 670 680 690 700
pF1KE2 VKISKKSKVGILPFVAEFEEFAGLAESIFKNAERRGDLDKAYTKLIRGVFVNVEKVANES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 VKISKKSKVGILPFVAEFEEFAGLAESIFKNAERRGDLDKAYTKLIRGVFVNVEKVANES
670 680 690 700 710 720
710 720 730 740 750 760
pF1KE2 QKTPRDVVMMENFHHIFATLSRLKISCLEAEKKEAKQKYTDHLQSYVIYSLGQPLEKLNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 QKTPRDVVMMENFHHIFATLSRLKISCLEAEKKEAKQKYTDHLQSYVIYSLGQPLEKLNH
730 740 750 760 770 780
770 780 790 800 810 820
pF1KE2 FFEGVEARVAQGIREEEVSYQLAFNKQELRKVIKEYPGKEVKKGLDNLYKKVDKHLCEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 FFEGVEARVAQGIREEEVSYQLAFNKQELRKVIKEYPGKEVKKGLDNLYKKVDKHLCEEE
790 800 810 820 830 840
830 840 850 860 870
pF1KE2 NLLQVVWHSMQDEFIRQYKHFEGLIARCYPGSGVTMEFTIQDILDYCSSIAQSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 NLLQVVWHSMQDEFIRQYKHFEGLIARCYPGSGVTMEFTIQDILDYCSSIAQSH
850 860 870 880 890
879 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 21:47:46 2016 done: Sun Nov 6 21:47:47 2016
Total Scan time: 3.740 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]