Result of FASTA (omim) for
pFN21AE2203
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2203, 875 aa
1>>>pF1KE2203 875 - 875 aa - 875 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.9825+/-0.000548; mu= -5.7123+/- 0.034
mean_var=315.5197+/-64.065, 0's: 0 Z-trim(116.5): 122 B-trim: 470 in 1/53
Lambda= 0.072204
statistics sampled from 27565 (27694) to 27565 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.648), E-opt: 0.2 (0.325), width: 16
Scan time: 11.580
The best scores are: opt bits E(85289)
NP_004389 (OMIM: 601235) probable ATP-dependent RN ( 875) 5688 607.4 9.6e-173
NP_006764 (OMIM: 606355) ATP-dependent RNA helicas ( 670) 1277 147.8 1.6e-34
NP_057439 (OMIM: 615428) probable ATP-dependent RN ( 455) 774 95.3 7.1e-19
NP_060365 (OMIM: 616621) probable ATP-dependent RN ( 796) 745 92.4 8.9e-18
NP_004388 (OMIM: 600326) probable ATP-dependent RN ( 483) 667 84.1 1.7e-15
NP_001244120 (OMIM: 600326) probable ATP-dependent ( 483) 667 84.1 1.7e-15
XP_005271474 (OMIM: 600326) PREDICTED: probable AT ( 483) 667 84.1 1.7e-15
NP_076977 (OMIM: 611665) ATP-dependent RNA helicas ( 881) 642 81.7 1.6e-14
NP_001104792 (OMIM: 611665) ATP-dependent RNA heli ( 882) 642 81.7 1.6e-14
NP_001308759 (OMIM: 608170,616871) probable ATP-de ( 496) 632 80.5 2.1e-14
NP_001308661 (OMIM: 608170,616871) probable ATP-de ( 496) 632 80.5 2.1e-14
XP_016879601 (OMIM: 613369) PREDICTED: ATP-depende ( 775) 636 81.1 2.3e-14
NP_057306 (OMIM: 608170,616871) probable ATP-depen ( 622) 632 80.6 2.6e-14
NP_987095 (OMIM: 613369) ATP-dependent RNA helicas ( 938) 636 81.1 2.7e-14
NP_031398 (OMIM: 613369) ATP-dependent RNA helicas ( 938) 636 81.1 2.7e-14
XP_016879600 (OMIM: 613369) PREDICTED: ATP-depende ( 938) 636 81.1 2.7e-14
XP_006721720 (OMIM: 613369) PREDICTED: ATP-depende ( 938) 636 81.1 2.7e-14
NP_001243839 (OMIM: 606357) nucleolar RNA helicase ( 715) 632 80.6 2.9e-14
NP_004719 (OMIM: 606357) nucleolar RNA helicase 2 ( 783) 632 80.6 3.1e-14
NP_006377 (OMIM: 608469) probable ATP-dependent RN ( 729) 631 80.5 3.1e-14
NP_001091974 (OMIM: 608469) probable ATP-dependent ( 731) 631 80.5 3.1e-14
XP_011534230 (OMIM: 606286) PREDICTED: probable AT ( 529) 619 79.2 5.8e-14
XP_011534229 (OMIM: 606286) PREDICTED: probable AT ( 529) 619 79.2 5.8e-14
XP_011534228 (OMIM: 606286) PREDICTED: probable AT ( 604) 619 79.2 6.4e-14
NP_061135 (OMIM: 606286) probable ATP-dependent RN ( 648) 619 79.2 6.8e-14
XP_011522561 (OMIM: 613369) PREDICTED: ATP-depende ( 674) 618 79.1 7.5e-14
XP_016872117 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 616 78.9 8.7e-14
XP_016872118 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 616 78.9 8.7e-14
XP_011538446 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 616 78.9 8.7e-14
XP_005270205 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 616 78.9 8.7e-14
XP_016872116 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 616 78.9 8.7e-14
NP_076950 (OMIM: 610373) ATP-dependent RNA helicas ( 737) 616 79.0 9.3e-14
XP_016872115 (OMIM: 610373) PREDICTED: ATP-depende ( 737) 616 79.0 9.3e-14
NP_001307526 (OMIM: 180630) probable ATP-dependent ( 614) 612 78.5 1.1e-13
NP_004387 (OMIM: 180630) probable ATP-dependent RN ( 614) 612 78.5 1.1e-13
NP_001307524 (OMIM: 180630) probable ATP-dependent ( 614) 612 78.5 1.1e-13
NP_001307525 (OMIM: 180630) probable ATP-dependent ( 614) 612 78.5 1.1e-13
XP_016866492 (OMIM: 606286) PREDICTED: probable AT ( 439) 602 77.4 1.7e-13
NP_001160006 (OMIM: 605281) probable ATP-dependent ( 575) 596 76.8 3.2e-13
XP_011541799 (OMIM: 605281) PREDICTED: probable AT ( 678) 596 76.9 3.7e-13
NP_001136021 (OMIM: 605281) probable ATP-dependent ( 690) 596 76.9 3.8e-13
XP_011541797 (OMIM: 605281) PREDICTED: probable AT ( 698) 596 76.9 3.8e-13
NP_001160005 (OMIM: 605281) probable ATP-dependent ( 704) 596 76.9 3.8e-13
NP_077726 (OMIM: 605281) probable ATP-dependent RN ( 724) 596 76.9 3.9e-13
XP_011508337 (OMIM: 174300,615464) PREDICTED: prob ( 619) 567 73.8 2.8e-12
XP_016857920 (OMIM: 174300,615464) PREDICTED: prob ( 619) 567 73.8 2.8e-12
NP_001026895 (OMIM: 174300,615464) probable ATP-de ( 619) 567 73.8 2.8e-12
XP_016857921 (OMIM: 174300,615464) PREDICTED: prob ( 619) 567 73.8 2.8e-12
NP_001407 (OMIM: 602641) eukaryotic initiation fac ( 406) 552 72.1 5.9e-12
NP_001278405 (OMIM: 612500) probable ATP-dependent ( 491) 551 72.1 7.4e-12
>>NP_004389 (OMIM: 601235) probable ATP-dependent RNA he (875 aa)
initn: 5688 init1: 5688 opt: 5688 Z-score: 3222.3 bits: 607.4 E(85289): 9.6e-173
Smith-Waterman score: 5688; 100.0% identity (100.0% similar) in 875 aa overlap (1-875:1-875)
10 20 30 40 50 60
pF1KE2 MGKTANSPGSGARPDPVRSFNRWKKKHSHRQNKKKQLRKQLKKPEWQVERESISRLMQNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MGKTANSPGSGARPDPVRSFNRWKKKHSHRQNKKKQLRKQLKKPEWQVERESISRLMQNY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 EKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 EKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 LAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 LKHEAERINNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LKHEAERINNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 ISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 FVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 FVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 PSEKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 PSEKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 LMKDKEVFDVSKLPIPEYALSLGLAVAPRVRFLQKMQKQPTKELVRSQADKVIEPRAPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LMKDKEVFDVSKLPIPEYALSLGLAVAPRVRFLQKMQKQPTKELVRSQADKVIEPRAPSL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 TNDEVEEFRAYFNEKMSILQKGGKRLEGTEHRQDNDTGNEEQEEEEDDEEEMEEKLAKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 TNDEVEEFRAYFNEKMSILQKGGKRLEGTEHRQDNDTGNEEQEEEEDDEEEMEEKLAKAK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 GSQAPSLPNTSEAQKIKEVPTQFLDRDEEEEDADFLKVKRHNVFGLDLKDEKTLQKKEPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GSQAPSLPNTSEAQKIKEVPTQFLDRDEEEEDADFLKVKRHNVFGLDLKDEKTLQKKEPS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 KSSIKKKMTKVAEAKKVMKRNFKVNKKITFTDEGELVQQWPQMQKSAIKDAEEDDDTGGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KSSIKKKMTKVAEAKKVMKRNFKVNKKITFTDEGELVQQWPQMQKSAIKDAEEDDDTGGI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE2 NLHKAKERLQEEDKFDKEEYRKKIKAKHREKRLKEREARREANKRQAKAKDEEEAFLDWS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 NLHKAKERLQEEDKFDKEEYRKKIKAKHREKRLKEREARREANKRQAKAKDEEEAFLDWS
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE2 DDDDDDDDGFDPSTLPDPDKYRSSEDSDSEDMENKISDTKKKQGMKKRSNSEVEDVGPTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 DDDDDDDDGFDPSTLPDPDKYRSSEDSDSEDMENKISDTKKKQGMKKRSNSEVEDVGPTS
790 800 810 820 830 840
850 860 870
pF1KE2 HNRKKARWDTLEPLDTGLSLAEDEELVLHLLRSQS
:::::::::::::::::::::::::::::::::::
NP_004 HNRKKARWDTLEPLDTGLSLAEDEELVLHLLRSQS
850 860 870
>>NP_006764 (OMIM: 606355) ATP-dependent RNA helicase DD (670 aa)
initn: 902 init1: 476 opt: 1277 Z-score: 740.7 bits: 147.8 E(85289): 1.6e-34
Smith-Waterman score: 1277; 42.0% identity (74.5% similar) in 505 aa overlap (12-510:121-621)
10 20 30 40
pF1KE2 MGKTANSPGSGARPDPVRSFNRWKKKHSHRQNKK-KQLRKQ
:.:: .. .. : : ... . :. ...
NP_006 TVLTNGEAAMQSSNSESKKKKKKKRKMVNDAEPDTKKAKTENKGKSEEESAETTKETENN
100 110 120 130 140 150
50 60 70 80 90
pF1KE2 LKKPEWQVERESISRLMQNYEKINVNEITRFSDFP--LSKKTLKGLQEAQYRLVTEIQKQ
..::. . .. . : . .. : : :... ....:::...: . .::::..
NP_006 VEKPDNDEDESEVPSLPLGLT--GAFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHK
160 170 180 190 200
100 110 120 130 140 150
pF1KE2 TIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTF
.: :.:.:.:.:::::::::::::.:..: . .:.. .: ::::.:::::::.:::
NP_006 SIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTF
210 220 230 240 250 260
160 170 180 190 200 210
pF1KE2 EVLRKVGKNHDFSAGLIIGGKDLKHEAERINN-INILVCTPGRLLQHMDETVSFHATDLQ
::... .: . :::.::.. . ::....: :::.: ::::::.::..: .: .::
NP_006 GVLKELMTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQ
270 280 290 300 310 320
220 230 240 250 260 270
pF1KE2 MLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKN-PEYVWV
::.::::::::.:: . .. .:. :: .:::.:::::::..:.::::.:::. : :: :
NP_006 CLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGV
330 340 350 360 370 380
280 290 300 310 320 330
pF1KE2 HEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRL
. .: :::.:.:: .... .:..::... ::: .:::::: :.: :... .
NP_006 DDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYI
390 400 410 420 430 440
340 350 360 370 380 390
pF1KE2 RPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDA
. .::.::.:.: .: .. .: ...:. ::.::::::.: :.:..:.: :.:
NP_006 --DLPVLAIHGKQKQNKRTTTFFQFCNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDP
450 460 470 480 490 500
400 410 420 430 440 450
pF1KE2 NTYIHRAGRTAR-YKEDGEALLILLPSEKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLE
. ::::.::::: . :.::::: : : .... : :.:::..:. .. :. :.:..::
NP_006 KEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVPLSEFDFSWSKISDIQSQLE
510 520 530 540 550 560
460 470 480 490 500 510
pF1KE2 SILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGLAVAPRVRFLQK
... .. :.. ::. . ::.:. . :..:.:..: .:. :::.:. : : :
NP_006 KLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNVN
570 580 590 600 610 620
520 530 540 550 560 570
pF1KE2 MQKQPTKELVRSQADKVIEPRAPSLTNDEVEEFRAYFNEKMSILQKGGKRLEGTEHRQDN
NP_006 SNEGKQKKRGGGGGFGYQKTKKVEKSKIFKHISKKSSDSRQFSH
630 640 650 660 670
>>NP_057439 (OMIM: 615428) probable ATP-dependent RNA he (455 aa)
initn: 715 init1: 264 opt: 774 Z-score: 459.9 bits: 95.3 E(85289): 7.1e-19
Smith-Waterman score: 774; 34.1% identity (66.1% similar) in 416 aa overlap (63-469:18-425)
40 50 60 70 80 90
pF1KE2 KKKQLRKQLKKPEWQVERESISRLMQNYEKINVNEITRFSDFPLSKKTLKGLQEAQYRLV
.. .: :.:. .. .. .. .
NP_057 MAAPEEHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKP
10 20 30 40
100 110 120 130 140 150
pF1KE2 TEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRE
:.:: ..: :::::.:..: :.:::::: :: .:.:.:: . . . : .:...::::
NP_057 TKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLE----TPQRLFALVLTPTRE
50 60 70 80 90 100
160 170 180 190 200 210
pF1KE2 LAYQTFEVLRKVGKNHDFSAGLIIGGKD-LKHEAERINNINILVCTPGRLLQHMDETVSF
::.: : .. .:.. ....:.:: : ... .. .:.. :::::..:...: .:
NP_057 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGF
110 120 130 140 150 160
220 230 240 250 260 270
pF1KE2 HATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNP
. :..::.:::::::.: : .. ... .:. :.:.:::::.::.:. : : .::::
NP_057 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNP
170 180 190 200 210 220
280 290 300 310 320 330
pF1KE2 EYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYR
: ..::.: :.: :: . : . : .: .. ..: :.:...:
NP_057 --VKCAVSSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTAL
230 240 250 260 270 280
340 350 360 370 380 390
pF1KE2 VFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFD
.. : : . . :::...: .:. :.: : ..:.:::.:.::::.: :. :..::
NP_057 LLRNL--GFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFD
290 300 310 320 330
400 410 420 430 440
pF1KE2 CPEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQ---LLQKKVPV-----KEIKIN
: .. ::::.::::: ..:.:. .. . . :. :. ::.: :. .
NP_057 IPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMML
340 350 360 370 380 390
450 460 470 480 490 500
pF1KE2 PEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLG
:.. ..:. . : . . :.:..
NP_057 TERVAEAQRFARMELREHGEKKKRSREDAGDNDDTEGAIGVRNKVAGGKMKKRKGR
400 410 420 430 440 450
>>NP_060365 (OMIM: 616621) probable ATP-dependent RNA he (796 aa)
initn: 592 init1: 382 opt: 745 Z-score: 440.1 bits: 92.4 E(85289): 8.9e-18
Smith-Waterman score: 754; 29.7% identity (59.2% similar) in 622 aa overlap (66-667:215-795)
40 50 60 70 80 90
pF1KE2 QLRKQLKKPEWQVERESISRLMQNYEKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEI
.: :.:. ::. ::.. .. : :
NP_060 KADTLKVKDRKKKKKKGQEAGGFFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPI
190 200 210 220 230 240
100 110 120 130 140 150
pF1KE2 QKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-YRLQWTSTDGLGVLIISPTRELA
:: : ..: :::. . : ::.::: :: .:::: : :. . . . ::.. :::::.
NP_060 QKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVT--RVLVLVPTRELG
250 260 270 280 290 300
160 170 180 190 200 210
pF1KE2 YQTFEVLRKVGKNHDFSAGLIIGGKDLK-HEAERINNINILVCTPGRLLQHMDETVSFHA
:. : :.... .... : .:: :.: .:: .::. :::::..:. . :::
NP_060 IQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHL
310 320 330 340 350 360
220 230 240 250 260 270
pF1KE2 TDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEY
.....:.::::::.:: : . :. .:. ..:::.:::::.: ::::: .:::::
NP_060 SSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVR
370 380 390 400 410 420
280 290 300 310 320 330
pF1KE2 VWVHEKAKYSTPATLEQNYIVCELQQ---KISVLYSFLRSHLKKKSIVFFSSCKEVQYLY
..:. .. . : :.:..: . .. . ... ..: . . ..: .. :... ..
NP_060 IFVNSNTDVA-P-FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMH
430 440 450 460 470 480
340 350 360 370 380 390
pF1KE2 RVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQF
.. . :... ::: .: .:.:. .: .. .: :::.::::::. .:. :..:
NP_060 ILLGLM--GLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINF
490 500 510 520 530
400 410 420 430 440
pF1KE2 DCPEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQLLQK-KVPVKEIKINPEKLID
:. . :.::.::::: . :... .. .:. :...... :.:::
NP_060 TMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAAKAPVKA----------
540 550 560 570 580
450 460 470 480 490 500
pF1KE2 VQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGLA-VAP
:: :: :: : . . : .:.:. : .: : .. . : .
NP_060 ------RILPQDVILKFRDK---------IEKM-EKDVYAVLQLEAEEKEMQQSEAQINT
590 600 610 620 630
510 520 530 540 550 560
pF1KE2 RVRFLQKMQKQPTKELVRSQADKVIEPRAPSLTNDEVEEFRAYFNEKMSILQKGGKRLEG
:.:.: .. ..: :: .. : : ..:: . : : :..
NP_060 AKRLLEKGKEAVVQEPERSWF-QTKEERKKEKIAKALQEFDLALRGK-----KKRKKFMK
640 650 660 670 680
570 580 590 600 610 620
pF1KE2 TEHRQDNDTGNEEQEEEEDDEEEMEEKLAKA--KGSQAPSLPNT----SEAQKIKEVPTQ
... . :..:... : . . :.::: ....: ..:. . :.: :. .
NP_060 DAKKKGEMTAEERSQFEILKAQMFAERLAKRNRRAKRARAMPEEEPVRGPAKKQKQGKKS
690 700 710 720 730 740
630 640 650 660 670
pF1KE2 FLDRDEEEEDADFLKVKRHNVFGLDLKDEKTL----QKKE---PSKSSIKKKMTKVAEAK
.:.. . . :: : : .....: : :.. ::: :..
NP_060 VFDEELTNTSKKALKQYRA---GPSFEERKQLGLPHQRRGGNFKSKSRYKRRK
750 760 770 780 790
680 690 700 710 720 730
pF1KE2 KVMKRNFKVNKKITFTDEGELVQQWPQMQKSAIKDAEEDDDTGGINLHKAKERLQEEDKF
>>NP_004388 (OMIM: 600326) probable ATP-dependent RNA he (483 aa)
initn: 469 init1: 162 opt: 667 Z-score: 399.3 bits: 84.1 E(85289): 1.7e-15
Smith-Waterman score: 667; 29.7% identity (64.9% similar) in 461 aa overlap (3-450:26-470)
10 20 30
pF1KE2 MGKTANSPGSGARPDPVRSFNRWKKKHSHRQNKKKQL
: ...::.:. ...:. :. .. .. ..:
NP_004 MSTARTENPVIMGLSSQNGQLRGPVKPTGGPGGGGTQTQ-QQMNQLKNTNTINNGTQQQA
10 20 30 40 50
40 50 60 70 80
pF1KE2 RKQLK--KP--EWQVERESISRLMQNYEKINVNEIT-----RFSDFPLSKKTLKGLQEAQ
... :: .:. . .: . .:.....: .: :. :... : :. :
NP_004 QSMTTTIKPGDDWK----KTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMG
60 70 80 90 100 110
90 100 110 120 130 140
pF1KE2 YRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIIS
.. . ::...: .::.:.:.:. ::.:.::. :.:.:.:: ::. . :.. ...:
NP_004 WEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE---RLD-LKKDNIQAMVIV
120 130 140 150 160 170
150 160 170 180 190 200
pF1KE2 PTRELAYQTFEVLRKVGKNHDFSAGLII--GGKDLKHEAERINN-INILVCTPGRLLQHM
:::::: :. .. .:.: : .: .. :: .:. . :... ..... ::::.:. .
NP_004 PTRELALQVSQICIQVSK-HMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLI
180 190 200 210 220 230
210 220 230 240 250 260
pF1KE2 DETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLAR
. :. .. .::.::::::..:.. :.. :. .: .:::.:: ::.::: ::. .
NP_004 KKGVA-KVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMN
240 250 260 270 280
270 280 290 300 310 320
pF1KE2 LSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKE
:..: . . :. : . : : .::. : ... ..::.: .: ..
NP_004 SHLQKPYEINLMEEL---TLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQR
290 300 310 320 330 340
330 340 350 360 370 380
pF1KE2 VQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVN
:. : . . .: : : . .:....: .: .:...: : ::. .::.:. :::
NP_004 VELLAKKISQL--GYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVN
350 360 370 380 390 400
390 400 410 420 430 440
pF1KE2 WVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQLLQK-KVPVKEIKINP
:..:: :. :.::.:: ::..:. . : :. .. ... .... .. . .: : :
NP_004 VVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNI
410 420 430 440 450 460
450 460 470 480 490 500
pF1KE2 EKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGL
.: . :
NP_004 DKSLYVAEYHSEPVEDEKP
470 480
>>NP_001244120 (OMIM: 600326) probable ATP-dependent RNA (483 aa)
initn: 469 init1: 162 opt: 667 Z-score: 399.3 bits: 84.1 E(85289): 1.7e-15
Smith-Waterman score: 667; 29.7% identity (64.9% similar) in 461 aa overlap (3-450:26-470)
10 20 30
pF1KE2 MGKTANSPGSGARPDPVRSFNRWKKKHSHRQNKKKQL
: ...::.:. ...:. :. .. .. ..:
NP_001 MSTARTENPVIMGLSSQNGQLRGPVKPTGGPGGGGTQTQ-QQMNQLKNTNTINNGTQQQA
10 20 30 40 50
40 50 60 70 80
pF1KE2 RKQLK--KP--EWQVERESISRLMQNYEKINVNEIT-----RFSDFPLSKKTLKGLQEAQ
... :: .:. . .: . .:.....: .: :. :... : :. :
NP_001 QSMTTTIKPGDDWK----KTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMG
60 70 80 90 100 110
90 100 110 120 130 140
pF1KE2 YRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIIS
.. . ::...: .::.:.:.:. ::.:.::. :.:.:.:: ::. . :.. ...:
NP_001 WEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE---RLD-LKKDNIQAMVIV
120 130 140 150 160 170
150 160 170 180 190 200
pF1KE2 PTRELAYQTFEVLRKVGKNHDFSAGLII--GGKDLKHEAERINN-INILVCTPGRLLQHM
:::::: :. .. .:.: : .: .. :: .:. . :... ..... ::::.:. .
NP_001 PTRELALQVSQICIQVSK-HMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLI
180 190 200 210 220 230
210 220 230 240 250 260
pF1KE2 DETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLAR
. :. .. .::.::::::..:.. :.. :. .: .:::.:: ::.::: ::. .
NP_001 KKGVA-KVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMN
240 250 260 270 280
270 280 290 300 310 320
pF1KE2 LSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKE
:..: . . :. : . : : .::. : ... ..::.: .: ..
NP_001 SHLQKPYEINLMEEL---TLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQR
290 300 310 320 330 340
330 340 350 360 370 380
pF1KE2 VQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVN
:. : . . .: : : . .:....: .: .:...: : ::. .::.:. :::
NP_001 VELLAKKISQL--GYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVN
350 360 370 380 390 400
390 400 410 420 430 440
pF1KE2 WVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQLLQK-KVPVKEIKINP
:..:: :. :.::.:: ::..:. . : :. .. ... .... .. . .: : :
NP_001 VVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNI
410 420 430 440 450 460
450 460 470 480 490 500
pF1KE2 EKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGL
.: . :
NP_001 DKSLYVAEYHSEPVEDEKP
470 480
>>XP_005271474 (OMIM: 600326) PREDICTED: probable ATP-de (483 aa)
initn: 469 init1: 162 opt: 667 Z-score: 399.3 bits: 84.1 E(85289): 1.7e-15
Smith-Waterman score: 667; 29.7% identity (64.9% similar) in 461 aa overlap (3-450:26-470)
10 20 30
pF1KE2 MGKTANSPGSGARPDPVRSFNRWKKKHSHRQNKKKQL
: ...::.:. ...:. :. .. .. ..:
XP_005 MSTARTENPVIMGLSSQNGQLRGPVKPTGGPGGGGTQTQ-QQMNQLKNTNTINNGTQQQA
10 20 30 40 50
40 50 60 70 80
pF1KE2 RKQLK--KP--EWQVERESISRLMQNYEKINVNEIT-----RFSDFPLSKKTLKGLQEAQ
... :: .:. . .: . .:.....: .: :. :... : :. :
XP_005 QSMTTTIKPGDDWK----KTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMG
60 70 80 90 100 110
90 100 110 120 130 140
pF1KE2 YRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIIS
.. . ::...: .::.:.:.:. ::.:.::. :.:.:.:: ::. . :.. ...:
XP_005 WEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE---RLD-LKKDNIQAMVIV
120 130 140 150 160 170
150 160 170 180 190 200
pF1KE2 PTRELAYQTFEVLRKVGKNHDFSAGLII--GGKDLKHEAERINN-INILVCTPGRLLQHM
:::::: :. .. .:.: : .: .. :: .:. . :... ..... ::::.:. .
XP_005 PTRELALQVSQICIQVSK-HMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLI
180 190 200 210 220 230
210 220 230 240 250 260
pF1KE2 DETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLAR
. :. .. .::.::::::..:.. :.. :. .: .:::.:: ::.::: ::. .
XP_005 KKGVA-KVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMN
240 250 260 270 280
270 280 290 300 310 320
pF1KE2 LSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKE
:..: . . :. : . : : .::. : ... ..::.: .: ..
XP_005 SHLQKPYEINLMEEL---TLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQR
290 300 310 320 330 340
330 340 350 360 370 380
pF1KE2 VQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVN
:. : . . .: : : . .:....: .: .:...: : ::. .::.:. :::
XP_005 VELLAKKISQL--GYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVN
350 360 370 380 390 400
390 400 410 420 430 440
pF1KE2 WVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQLLQK-KVPVKEIKINP
:..:: :. :.::.:: ::..:. . : :. .. ... .... .. . .: : :
XP_005 VVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNI
410 420 430 440 450 460
450 460 470 480 490 500
pF1KE2 EKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGL
.: . :
XP_005 DKSLYVAEYHSEPVEDEKP
470 480
>>NP_076977 (OMIM: 611665) ATP-dependent RNA helicase DD (881 aa)
initn: 586 init1: 267 opt: 642 Z-score: 381.5 bits: 81.7 E(85289): 1.6e-14
Smith-Waterman score: 716; 27.2% identity (59.6% similar) in 718 aa overlap (71-728:98-795)
50 60 70 80 90 100
pF1KE2 LKKPEWQVERESISRLMQNYEKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTI
:... :: ..::... :.. : ::..::
NP_076 FPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTI
70 80 90 100 110 120
110 120 130 140 150
pF1KE2 GLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTD-GLGVLIISPTRELAYQTFE
. :.::::.. :.:::::: ::.:..: ::. :.. : .::.::::::: ::..
NP_076 PVILDGKDVVAMARTGSGKTACFLLPMFE---RLKTHSAQTGARALILSPTRELALQTLK
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE2 VLRKVGKNHDFSAGLIIGGKDLKHEAERIN-NINILVCTPGRLLQHMDETVSFHATDLQM
...:: ....::.:: .. . .. : .:.. :::::. :. .:.. ....
NP_076 FTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLV-HVAVEMSLKLQSVEY
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE2 LVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHE
.:.:::::...::::. .. .: :: .::.::::: : . ..:: .: .: . .
NP_076 VVFDEADRLFEMGFAEQLQEIIARLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDV
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE2 KAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKK--SIVFFSSCKEVQYLYRVFCRL
.: . :. .... . . : .:: .:.. .. . ..:: .. ....:: ...
NP_076 DTKLNEQ--LKTSFFLVREDTKAAVLLHLLHNVVRPQDQTVVFVATKHHAEYLTELLTTQ
310 320 330 340 350 360
340 350 360 370 380 390
pF1KE2 RPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDA
: :: ... . : .:. . ..:..::.::::::.: .. :.... : .
NP_076 R--VSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKG
370 380 390 400 410
400 410 420 430 440
pF1KE2 NTYIHRAGRTARYKEDGEALLILLPSEKAMVQQL---LQKKV----PVKEIK----IN--
. ..::.::.:: ..: : .. :.: .. .: : ... :.:: . ..
NP_076 KLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGRSLTLARPLKEPSGVAGVDGM
420 430 440 450 460 470
450 460 470 480 490
pF1KE2 ----PEKLIDVQKK-LESILAQDQDLK---ERAQRCFVSYVRSVYLMKDKEVFDVSKLPI
:....: . . :.: : . .:. . :. .:::: . . . .... .
NP_076 LGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQQQYVRSRPAPSPESIKRAKEMDL
480 490 500 510 520 530
500 510 520 530 540
pF1KE2 PEYALSLGLAVAPRVRF----LQKMQKQPTKELVRSQADKVIEPRAPS--LTNDEVEEFR
..::: :: ::... . . ::.: ..: : : : .. .. :
NP_076 ----VGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRAT-IFEINASSRDLCSQVMRAKR
540 550 560 570 580 590
550 560 570 580 590
pF1KE2 AYFNEKMSILQKGGKRLEGTEHRQDNDTG-----------NEEQEEEEDDEEEMEEKLAK
. .. .:.: . : ...:.. .: . :.::::. : .:. ...
NP_076 QKDRKAIARFQQGQQ---GRQEQQEGPVGPAPSRPALQEKQPEKEEEEEAGESVEDIFSE
600 610 620 630 640 650
600 610 620 630 640
pF1KE2 AKGSQAP-SLPNTSEAQKIKE---------VPTQFLDRDEEE------EDADFLKVKRHN
. : . : :: . .. .: .: . : : :. : . : .
NP_076 VVGRKRQRSGPNRGAKRRREEARQRDQEFYIPYRPKDFDSERGLSISGEGGAFEQQAAGA
660 670 680 690 700 710
650 660 670 680 690 700
pF1KE2 VFGLDLKDEKTLQKKEPSKSSIKKKMTKVAEAKKVMKRNFKVN--KKITFTDEGELVQQW
:. : . ..: . . . . .:: :... . :...:.. . :. . . .: :.:
NP_076 VLDLMGDEAQNLTRGRQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKW
720 730 740 750 760 770
710 720 730 740 750 760
pF1KE2 PQMQKSAIKDAEEDDDTGGINLHKAKERLQEEDKFDKEEYRKKIKAKHREKRLKEREARR
: :: : : .:.: : . ... ::
NP_076 KQKQK--IDD--RDSDEEGASDRRGPERRGGKRDRGQGASRPHAPGTPAGRVRPELKTKQ
780 790 800 810 820
>>NP_001104792 (OMIM: 611665) ATP-dependent RNA helicase (882 aa)
initn: 586 init1: 267 opt: 642 Z-score: 381.5 bits: 81.7 E(85289): 1.6e-14
Smith-Waterman score: 716; 27.2% identity (59.6% similar) in 718 aa overlap (71-728:98-795)
50 60 70 80 90 100
pF1KE2 LKKPEWQVERESISRLMQNYEKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTI
:... :: ..::... :.. : ::..::
NP_001 FPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTI
70 80 90 100 110 120
110 120 130 140 150
pF1KE2 GLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTD-GLGVLIISPTRELAYQTFE
. :.::::.. :.:::::: ::.:..: ::. :.. : .::.::::::: ::..
NP_001 PVILDGKDVVAMARTGSGKTACFLLPMFE---RLKTHSAQTGARALILSPTRELALQTLK
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE2 VLRKVGKNHDFSAGLIIGGKDLKHEAERIN-NINILVCTPGRLLQHMDETVSFHATDLQM
...:: ....::.:: .. . .. : .:.. :::::. :. .:.. ....
NP_001 FTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLV-HVAVEMSLKLQSVEY
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE2 LVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHE
.:.:::::...::::. .. .: :: .::.::::: : . ..:: .: .: . .
NP_001 VVFDEADRLFEMGFAEQLQEIIARLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDV
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE2 KAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKK--SIVFFSSCKEVQYLYRVFCRL
.: . :. .... . . : .:: .:.. .. . ..:: .. ....:: ...
NP_001 DTKLNEQ--LKTSFFLVREDTKAAVLLHLLHNVVRPQDQTVVFVATKHHAEYLTELLTTQ
310 320 330 340 350 360
340 350 360 370 380 390
pF1KE2 RPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDA
: :: ... . : .:. . ..:..::.::::::.: .. :.... : .
NP_001 R--VSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKG
370 380 390 400 410
400 410 420 430 440
pF1KE2 NTYIHRAGRTARYKEDGEALLILLPSEKAMVQQL---LQKKV----PVKEIK----IN--
. ..::.::.:: ..: : .. :.: .. .: : ... :.:: . ..
NP_001 KLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGRSLTLARPLKEPSGVAGVDGM
420 430 440 450 460 470
450 460 470 480 490
pF1KE2 ----PEKLIDVQKK-LESILAQDQDLK---ERAQRCFVSYVRSVYLMKDKEVFDVSKLPI
:....: . . :.: : . .:. . :. .:::: . . . .... .
NP_001 LGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQQQYVRSRPAPSPESIKRAKEMDL
480 490 500 510 520 530
500 510 520 530 540
pF1KE2 PEYALSLGLAVAPRVRF----LQKMQKQPTKELVRSQADKVIEPRAPS--LTNDEVEEFR
..::: :: ::... . . ::.: ..: : : : .. .. :
NP_001 ----VGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRAT-IFEINASSRDLCSQVMRAKR
540 550 560 570 580 590
550 560 570 580 590
pF1KE2 AYFNEKMSILQKGGKRLEGTEHRQDNDTG-----------NEEQEEEEDDEEEMEEKLAK
. .. .:.: . : ...:.. .: . :.::::. : .:. ...
NP_001 QKDRKAIARFQQGQQ---GRQEQQEGPVGPAPSRPALQEKQPEKEEEEEAGESVEDIFSE
600 610 620 630 640 650
600 610 620 630 640
pF1KE2 AKGSQAP-SLPNTSEAQKIKE---------VPTQFLDRDEEE------EDADFLKVKRHN
. : . : :: . .. .: .: . : : :. : . : .
NP_001 VVGRKRQRSGPNRGAKRRREEARQRDQEFYIPYRPKDFDSERGLSISGEGGAFEQQAAGA
660 670 680 690 700 710
650 660 670 680 690 700
pF1KE2 VFGLDLKDEKTLQKKEPSKSSIKKKMTKVAEAKKVMKRNFKVN--KKITFTDEGELVQQW
:. : . ..: . . . . .:: :... . :...:.. . :. . . .: :.:
NP_001 VLDLMGDEAQNLTRGRQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKW
720 730 740 750 760 770
710 720 730 740 750 760
pF1KE2 PQMQKSAIKDAEEDDDTGGINLHKAKERLQEEDKFDKEEYRKKIKAKHREKRLKEREARR
: :: : : .:.: : . ... ::
NP_001 KQKQK--IDD--RDSDEEGASDRRGPERRGGKRDRGQAGASRPHAPGTPAGRVRPELKTK
780 790 800 810 820
>>NP_001308759 (OMIM: 608170,616871) probable ATP-depend (496 aa)
initn: 596 init1: 223 opt: 632 Z-score: 379.4 bits: 80.5 E(85289): 2.1e-14
Smith-Waterman score: 640; 33.2% identity (62.6% similar) in 404 aa overlap (68-450:54-450)
40 50 60 70 80 90
pF1KE2 RKQLKKPEWQVERESISRLMQNYEKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQK
: :... . :.::.. . : ::
NP_001 RYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQI
30 40 50 60 70 80
100 110 120 130 140 150
pF1KE2 QTIGLALQGKDVLGAAKTGSGKTLAFLVPV----LEALYRLQWTSTDGLGVLIISPTREL
: : :.:.:..: : :::::::.: .:: :: :: ... .: ::: :.:::
NP_001 QGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSREL
90 100 110 120 130 140
160 170 180 190 200
pF1KE2 AYQTFEVLRKVGK--NHDFSA----GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMD
: :: .:. . ..: : .: ::: ..:.. : : ......: :::::.. ..
NP_001 ARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQ
150 160 170 180 190 200
210 220 230 240 250 260
pF1KE2 ETVSFHATDL-QMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLAR
. . . :. ..:.::::::..:::: . ... . .:::::::::. :.....:.
NP_001 KKMV--SLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAK
210 220 230 240 250 260
270 280 290 300 310 320
pF1KE2 LSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKE
.: .: . : . . : . : .:. : :. : :.. ..: . .
NP_001 SALVKPVTINVGRAGAASLDVIQEVEYVKEE--AKMVYLLECLQK-TPPPVLIFAEKKAD
270 280 290 300 310
330 340 350 360 370 380
pF1KE2 VQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVN
:. ... . : :: .:.:: ..: .: .. . : . . :: :::.:..::::::..
NP_001 VDAIHEYL--LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQ
320 330 340 350 360 370
390 400 410 420 430
pF1KE2 WVLQFDCPEDANTYIHRAGRTARYKEDGEALLIL--------LPSEKAMVQQLLQKKVPV
:...: ::. ..:.:: :::.: . : : .. : . ::.. . :: ::
NP_001 HVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPV
380 390 400 410 420 430
440 450 460 470 480 490
pF1KE2 KEI-KINPEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIP
.. . . :...:.
NP_001 LQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF
440 450 460 470 480 490
875 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 15:45:02 2016 done: Mon Nov 7 15:45:04 2016
Total Scan time: 11.580 Total Display time: 0.150
Function used was FASTA [36.3.4 Apr, 2011]