Result of FASTA (omim) for
pFN21AE2054
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2054, 625 aa
1>>>pF1KE2054 625 - 625 aa - 625 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.6924+/-0.000507; mu= -4.1170+/- 0.032
mean_var=447.0005+/-89.324, 0's: 0 Z-trim(119.0): 160 B-trim: 0 in 0/55
Lambda= 0.060662
statistics sampled from 32302 (32483) to 32302 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.381), width: 16
Scan time: 8.290
The best scores are: opt bits E(85289)
NP_001132962 (OMIM: 607380,616629) TRAF3-interacti ( 625) 4034 368.2 4.9e-101
XP_006712477 (OMIM: 607380,616629) PREDICTED: TRAF ( 624) 4016 366.6 1.5e-100
XP_011509250 (OMIM: 607380,616629) PREDICTED: TRAF ( 659) 2303 216.7 2e-55
NP_056465 (OMIM: 607380,616629) TRAF3-interacting ( 691) 2296 216.1 3.2e-55
XP_011509247 (OMIM: 607380,616629) PREDICTED: TRAF ( 712) 2292 215.8 4.2e-55
XP_016859278 (OMIM: 607380,616629) PREDICTED: TRAF ( 724) 2292 215.8 4.2e-55
XP_011509246 (OMIM: 607380,616629) PREDICTED: TRAF ( 725) 2292 215.8 4.2e-55
XP_011509248 (OMIM: 607380,616629) PREDICTED: TRAF ( 701) 2031 192.9 3.1e-48
XP_011509249 (OMIM: 607380,616629) PREDICTED: TRAF ( 681) 2011 191.2 1e-47
XP_011509252 (OMIM: 607380,616629) PREDICTED: TRAF ( 347) 1766 169.4 1.9e-41
XP_011535347 (OMIM: 612427) PREDICTED: RNA-binding ( 638) 381 48.5 8.6e-05
XP_011535346 (OMIM: 612427) PREDICTED: RNA-binding ( 843) 381 48.6 0.0001
NP_067062 (OMIM: 612427) RNA-binding protein 25 [H ( 843) 381 48.6 0.0001
NP_001310464 (OMIM: 609268) splicing regulatory gl ( 358) 367 47.0 0.00014
NP_001257421 (OMIM: 609268) splicing regulatory gl ( 507) 367 47.1 0.00017
NP_001310463 (OMIM: 609268) splicing regulatory gl ( 359) 363 46.6 0.00018
XP_016864545 (OMIM: 609268) PREDICTED: splicing re ( 359) 363 46.6 0.00018
NP_001310458 (OMIM: 609268) splicing regulatory gl ( 623) 367 47.3 0.0002
XP_011541473 (OMIM: 609268) PREDICTED: splicing re ( 508) 363 46.8 0.00022
NP_001310456 (OMIM: 609268) splicing regulatory gl ( 508) 363 46.8 0.00022
NP_631907 (OMIM: 609268) splicing regulatory gluta ( 508) 363 46.8 0.00022
NP_001070667 (OMIM: 609268) splicing regulatory gl ( 624) 363 46.9 0.00025
NP_001310462 (OMIM: 609268) splicing regulatory gl ( 538) 343 45.1 0.00077
XP_005266369 (OMIM: 616453) PREDICTED: zinc finger (1564) 335 44.9 0.0025
NP_055885 (OMIM: 616453) zinc finger CCCH domain-c (1564) 335 44.9 0.0025
NP_001317495 (OMIM: 616453) zinc finger CCCH domai (1668) 335 45.0 0.0026
NP_001317496 (OMIM: 616453) zinc finger CCCH domai (1668) 335 45.0 0.0026
NP_001317494 (OMIM: 616453) zinc finger CCCH domai (1668) 335 45.0 0.0026
XP_005266367 (OMIM: 616453) PREDICTED: zinc finger (1669) 335 45.0 0.0026
XP_016875966 (OMIM: 616453) PREDICTED: zinc finger (1669) 335 45.0 0.0026
NP_001070256 (OMIM: 616453) zinc finger CCCH domai (1669) 335 45.0 0.0026
XP_016875969 (OMIM: 616453) PREDICTED: zinc finger (1669) 335 45.0 0.0026
NP_001317493 (OMIM: 616453) zinc finger CCCH domai (1669) 335 45.0 0.0026
XP_016875968 (OMIM: 616453) PREDICTED: zinc finger (1669) 335 45.0 0.0026
XP_016875967 (OMIM: 616453) PREDICTED: zinc finger (1669) 335 45.0 0.0026
>>NP_001132962 (OMIM: 607380,616629) TRAF3-interacting p (625 aa)
initn: 4034 init1: 4034 opt: 4034 Z-score: 1934.9 bits: 368.2 E(85289): 4.9e-101
Smith-Waterman score: 4034; 100.0% identity (100.0% similar) in 625 aa overlap (1-625:1-625)
10 20 30 40 50 60
pF1KE2 MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 DRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 RDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 KPEKKSASSGEMSKKLSDGTFKDSKAETETEISTRASKSLTTKTSKRRSKNSVEGDSTSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPEKKSASSGEMSKKLSDGTFKDSKAETETEISTRASKSLTTKTSKRRSKNSVEGDSTSD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 AEGDAGPAGQDKSEVPETPEIPNELSSNIRRIPRPGSARPAPPRVKRQDSMEALQMDRSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEGDAGPAGQDKSEVPETPEIPNELSSNIRRIPRPGSARPAPPRVKRQDSMEALQMDRSG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 SGKTVSNVITESHNSDNEEDDQFVVEAAPQLSEMSEIEMVTAVELEEEEKHGGLVKKILE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGKTVSNVITESHNSDNEEDDQFVVEAAPQLSEMSEIEMVTAVELEEEEKHGGLVKKILE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 TKKDYEKLQQSPKPGEKERSLFESAWKKEKDIVSKEIEKLRTSIQTLCKSALPLGKIMDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKKDYEKLQQSPKPGEKERSLFESAWKKEKDIVSKEIEKLRTSIQTLCKSALPLGKIMDY
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 IQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAELAELEQLIKDQQDKICA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAELAELEQLIKDQQDKICA
550 560 570 580 590 600
610 620
pF1KE2 VKANILKNEEKIQKMVYSINLTSRR
:::::::::::::::::::::::::
NP_001 VKANILKNEEKIQKMVYSINLTSRR
610 620
>>XP_006712477 (OMIM: 607380,616629) PREDICTED: TRAF3-in (624 aa)
initn: 2559 init1: 2328 opt: 4016 Z-score: 1926.4 bits: 366.6 E(85289): 1.5e-100
Smith-Waterman score: 4016; 99.8% identity (99.8% similar) in 625 aa overlap (1-625:1-624)
10 20 30 40 50 60
pF1KE2 MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 DRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 RDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 KPEKKSASSGEMSKKLSDGTFKDSKAETETEISTRASKSLTTKTSKRRSKNSVEGDSTSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KPEKKSASSGEMSKKLSDGTFKDSKAETETEISTRASKSLTTKTSKRRSKNSVEGDSTSD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 AEGDAGPAGQDKSEVPETPEIPNELSSNIRRIPRPGSARPAPPRVKRQDSMEALQMDRSG
: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 A-GDAGPAGQDKSEVPETPEIPNELSSNIRRIPRPGSARPAPPRVKRQDSMEALQMDRSG
370 380 390 400 410
430 440 450 460 470 480
pF1KE2 SGKTVSNVITESHNSDNEEDDQFVVEAAPQLSEMSEIEMVTAVELEEEEKHGGLVKKILE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SGKTVSNVITESHNSDNEEDDQFVVEAAPQLSEMSEIEMVTAVELEEEEKHGGLVKKILE
420 430 440 450 460 470
490 500 510 520 530 540
pF1KE2 TKKDYEKLQQSPKPGEKERSLFESAWKKEKDIVSKEIEKLRTSIQTLCKSALPLGKIMDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TKKDYEKLQQSPKPGEKERSLFESAWKKEKDIVSKEIEKLRTSIQTLCKSALPLGKIMDY
480 490 500 510 520 530
550 560 570 580 590 600
pF1KE2 IQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAELAELEQLIKDQQDKICA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAELAELEQLIKDQQDKICA
540 550 560 570 580 590
610 620
pF1KE2 VKANILKNEEKIQKMVYSINLTSRR
:::::::::::::::::::::::::
XP_006 VKANILKNEEKIQKMVYSINLTSRR
600 610 620
>>XP_011509250 (OMIM: 607380,616629) PREDICTED: TRAF3-in (659 aa)
initn: 2293 init1: 2293 opt: 2303 Z-score: 1115.9 bits: 216.7 E(85289): 2e-55
Smith-Waterman score: 3942; 94.8% identity (94.8% similar) in 657 aa overlap (1-623:1-657)
10 20 30 40 50 60
pF1KE2 MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 DRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 RDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHD
250 260 270 280 290 300
310 320 330 340 350
pF1KE2 KPEKKSASSGEMSKKLSDGTFKDSKAETETEISTRASKSLTTKTSKRRSKNSVEG-----
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KPEKKSASSGEMSKKLSDGTFKDSKAETETEISTRASKSLTTKTSKRRSKNSVEGTKEAN
310 320 330 340 350 360
360 370 380
pF1KE2 -----------------------------DSTSDAEGDAGPAGQDKSEVPETPEIPNELS
:::::::::::::::::::::::::::::::
XP_011 INSTSISDDNSASLRCENIQPNPTEKQKGDSTSDAEGDAGPAGQDKSEVPETPEIPNELS
370 380 390 400 410 420
390 400 410 420 430 440
pF1KE2 SNIRRIPRPGSARPAPPRVKRQDSMEALQMDRSGSGKTVSNVITESHNSDNEEDDQFVVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SNIRRIPRPGSARPAPPRVKRQDSMEALQMDRSGSGKTVSNVITESHNSDNEEDDQFVVE
430 440 450 460 470 480
450 460 470 480 490 500
pF1KE2 AAPQLSEMSEIEMVTAVELEEEEKHGGLVKKILETKKDYEKLQQSPKPGEKERSLFESAW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AAPQLSEMSEIEMVTAVELEEEEKHGGLVKKILETKKDYEKLQQSPKPGEKERSLFESAW
490 500 510 520 530 540
510 520 530 540 550 560
pF1KE2 KKEKDIVSKEIEKLRTSIQTLCKSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKEKDIVSKEIEKLRTSIQTLCKSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEAL
550 560 570 580 590 600
570 580 590 600 610 620
pF1KE2 QQEQRITDCAVEPLKAELAELEQLIKDQQDKICAVKANILKNEEKIQKMVYSINLTSRR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQEQRITDCAVEPLKAELAELEQLIKDQQDKICAVKANILKNEEKIQKMVYSINLTSRR
610 620 630 640 650
>>NP_056465 (OMIM: 607380,616629) TRAF3-interacting prot (691 aa)
initn: 2292 init1: 2292 opt: 2296 Z-score: 1112.4 bits: 216.1 E(85289): 3.2e-55
Smith-Waterman score: 3679; 90.0% identity (90.0% similar) in 657 aa overlap (1-591:1-657)
10 20 30 40 50 60
pF1KE2 MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 DNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 DRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 DRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 RDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 RDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHD
250 260 270 280 290 300
310 320 330 340 350
pF1KE2 KPEKKSASSGEMSKKLSDGTFKDSKAETETEISTRASKSLTTKTSKRRSKNSVEG-----
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 KPEKKSASSGEMSKKLSDGTFKDSKAETETEISTRASKSLTTKTSKRRSKNSVEGRKEDN
310 320 330 340 350 360
pF1KE2 ------------------------------------------------------------
NP_056 ISAKSLDSIVSGINNEPNQETTTSEIGTKEANINSTSISDDNSASLRCENIQPNPTEKQK
370 380 390 400 410 420
360 370 380 390 400 410
pF1KE2 -DSTSDAEGDAGPAGQDKSEVPETPEIPNELSSNIRRIPRPGSARPAPPRVKRQDSMEAL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 GDSTSDAEGDAGPAGQDKSEVPETPEIPNELSSNIRRIPRPGSARPAPPRVKRQDSMEAL
430 440 450 460 470 480
420 430 440 450 460 470
pF1KE2 QMDRSGSGKTVSNVITESHNSDNEEDDQFVVEAAPQLSEMSEIEMVTAVELEEEEKHGGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QMDRSGSGKTVSNVITESHNSDNEEDDQFVVEAAPQLSEMSEIEMVTAVELEEEEKHGGL
490 500 510 520 530 540
480 490 500 510 520 530
pF1KE2 VKKILETKKDYEKLQQSPKPGEKERSLFESAWKKEKDIVSKEIEKLRTSIQTLCKSALPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 VKKILETKKDYEKLQQSPKPGEKERSLFESAWKKEKDIVSKEIEKLRTSIQTLCKSALPL
550 560 570 580 590 600
540 550 560 570 580 590
pF1KE2 GKIMDYIQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAELAELEQLIKDQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 GKIMDYIQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAELAELEQLIKDQ
610 620 630 640 650 660
600 610 620
pF1KE2 QDKICAVKANILKNEEKIQKMVYSINLTSRR
NP_056 QDKICAVKANILKNEEKIQKMVYSINLTSRR
670 680 690
>>XP_011509247 (OMIM: 607380,616629) PREDICTED: TRAF3-in (712 aa)
initn: 2292 init1: 2292 opt: 2292 Z-score: 1110.3 bits: 215.8 E(85289): 4.2e-55
Smith-Waterman score: 3507; 86.8% identity (86.8% similar) in 657 aa overlap (1-570:1-657)
10 20 30 40 50 60
pF1KE2 MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 DRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 RDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHD
250 260 270 280 290 300
310 320 330 340 350
pF1KE2 KPEKKSASSGEMSKKLSDGTFKDSKAETETEISTRASKSLTTKTSKRRSKNSVEG-----
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KPEKKSASSGEMSKKLSDGTFKDSKAETETEISTRASKSLTTKTSKRRSKNSVEGRRDPK
310 320 330 340 350 360
pF1KE2 ------------------------------------------------------------
XP_011 TSENSLSPEKEHNFSYCKAKKEHSMKQLGRKEDNISAKSLDSIVSGINNEPNQETTTSEI
370 380 390 400 410 420
360 370 380 390
pF1KE2 ----------------------DSTSDAEGDAGPAGQDKSEVPETPEIPNELSSNIRRIP
::::::::::::::::::::::::::::::::::::::
XP_011 DDNSASLRCENIQPNPTEKQKGDSTSDAEGDAGPAGQDKSEVPETPEIPNELSSNIRRIP
430 440 450 460 470 480
400 410 420 430 440 450
pF1KE2 RPGSARPAPPRVKRQDSMEALQMDRSGSGKTVSNVITESHNSDNEEDDQFVVEAAPQLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RPGSARPAPPRVKRQDSMEALQMDRSGSGKTVSNVITESHNSDNEEDDQFVVEAAPQLSE
490 500 510 520 530 540
460 470 480 490 500 510
pF1KE2 MSEIEMVTAVELEEEEKHGGLVKKILETKKDYEKLQQSPKPGEKERSLFESAWKKEKDIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSEIEMVTAVELEEEEKHGGLVKKILETKKDYEKLQQSPKPGEKERSLFESAWKKEKDIV
550 560 570 580 590 600
520 530 540 550 560 570
pF1KE2 SKEIEKLRTSIQTLCKSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEALQQEQRIT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SKEIEKLRTSIQTLCKSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEALQQEQRIT
610 620 630 640 650 660
580 590 600 610 620
pF1KE2 DCAVEPLKAELAELEQLIKDQQDKICAVKANILKNEEKIQKMVYSINLTSRR
XP_011 DCAVEPLKAELAELEQLIKDQQDKICAVKANILKNEEKIQKMVYSINLTSRR
670 680 690 700 710
>>XP_016859278 (OMIM: 607380,616629) PREDICTED: TRAF3-in (724 aa)
initn: 3979 init1: 2292 opt: 2292 Z-score: 1110.3 bits: 215.8 E(85289): 4.2e-55
Smith-Waterman score: 3384; 84.7% identity (84.7% similar) in 658 aa overlap (1-558:1-657)
10 20 30 40 50 60
pF1KE2 MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 DRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 RDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHD
250 260 270 280 290 300
310 320 330 340 350
pF1KE2 KPEKKSASSGEMSKKLSDGTFKDSKAETETEISTRASKSLTTKTSKRRSKNSVEG-----
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KPEKKSASSGEMSKKLSDGTFKDSKAETETEISTRASKSLTTKTSKRRSKNSVEGRRDPK
310 320 330 340 350 360
pF1KE2 ------------------------------------------------------------
XP_016 TSENSLSPEKEHNFSYCKAKKEHSMKQLGRKEDNISAKSLDSIVSGINNEPNQETTTSEI
370 380 390 400 410 420
360 370 380
pF1KE2 -----------------------------------DSTSDAEGDAGPAGQDKSEVPETPE
:::::: ::::::::::::::::::
XP_016 GTKEANINSTSISDDNSASLRCENIQPNPTEKQKGDSTSDA-GDAGPAGQDKSEVPETPE
430 440 450 460 470
390 400 410 420 430 440
pF1KE2 IPNELSSNIRRIPRPGSARPAPPRVKRQDSMEALQMDRSGSGKTVSNVITESHNSDNEED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IPNELSSNIRRIPRPGSARPAPPRVKRQDSMEALQMDRSGSGKTVSNVITESHNSDNEED
480 490 500 510 520 530
450 460 470 480 490 500
pF1KE2 DQFVVEAAPQLSEMSEIEMVTAVELEEEEKHGGLVKKILETKKDYEKLQQSPKPGEKERS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DQFVVEAAPQLSEMSEIEMVTAVELEEEEKHGGLVKKILETKKDYEKLQQSPKPGEKERS
540 550 560 570 580 590
510 520 530 540 550 560
pF1KE2 LFESAWKKEKDIVSKEIEKLRTSIQTLCKSALPLGKIMDYIQEDVDAMQNELQMWHSENR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFESAWKKEKDIVSKEIEKLRTSIQTLCKSALPLGKIMDYIQEDVDAMQNELQMWHSENR
600 610 620 630 640 650
570 580 590 600 610 620
pF1KE2 QHAEALQQEQRITDCAVEPLKAELAELEQLIKDQQDKICAVKANILKNEEKIQKMVYSIN
XP_016 QHAEALQQEQRITDCAVEPLKAELAELEQLIKDQQDKICAVKANILKNEEKIQKMVYSIN
660 670 680 690 700 710
>--
initn: 422 init1: 422 opt: 422 Z-score: 225.8 bits: 52.1 E(85289): 7.8e-06
Smith-Waterman score: 422; 100.0% identity (100.0% similar) in 67 aa overlap (559-625:658-724)
530 540 550 560 570 580
pF1KE2 KSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAELAELE
::::::::::::::::::::::::::::::
XP_016 KSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAELAELE
630 640 650 660 670 680
590 600 610 620
pF1KE2 QLIKDQQDKICAVKANILKNEEKIQKMVYSINLTSRR
:::::::::::::::::::::::::::::::::::::
XP_016 QLIKDQQDKICAVKANILKNEEKIQKMVYSINLTSRR
690 700 710 720
>>XP_011509246 (OMIM: 607380,616629) PREDICTED: TRAF3-in (725 aa)
initn: 2292 init1: 2292 opt: 2292 Z-score: 1110.2 bits: 215.8 E(85289): 4.2e-55
Smith-Waterman score: 3396; 84.8% identity (84.8% similar) in 657 aa overlap (1-557:1-657)
10 20 30 40 50 60
pF1KE2 MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 DRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 RDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHD
250 260 270 280 290 300
310 320 330 340 350
pF1KE2 KPEKKSASSGEMSKKLSDGTFKDSKAETETEISTRASKSLTTKTSKRRSKNSVEG-----
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KPEKKSASSGEMSKKLSDGTFKDSKAETETEISTRASKSLTTKTSKRRSKNSVEGRRDPK
310 320 330 340 350 360
pF1KE2 ------------------------------------------------------------
XP_011 TSENSLSPEKEHNFSYCKAKKEHSMKQLGRKEDNISAKSLDSIVSGINNEPNQETTTSEI
370 380 390 400 410 420
360 370 380
pF1KE2 -----------------------------------DSTSDAEGDAGPAGQDKSEVPETPE
:::::::::::::::::::::::::
XP_011 GTKEANINSTSISDDNSASLRCENIQPNPTEKQKGDSTSDAEGDAGPAGQDKSEVPETPE
430 440 450 460 470 480
390 400 410 420 430 440
pF1KE2 IPNELSSNIRRIPRPGSARPAPPRVKRQDSMEALQMDRSGSGKTVSNVITESHNSDNEED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IPNELSSNIRRIPRPGSARPAPPRVKRQDSMEALQMDRSGSGKTVSNVITESHNSDNEED
490 500 510 520 530 540
450 460 470 480 490 500
pF1KE2 DQFVVEAAPQLSEMSEIEMVTAVELEEEEKHGGLVKKILETKKDYEKLQQSPKPGEKERS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DQFVVEAAPQLSEMSEIEMVTAVELEEEEKHGGLVKKILETKKDYEKLQQSPKPGEKERS
550 560 570 580 590 600
510 520 530 540 550 560
pF1KE2 LFESAWKKEKDIVSKEIEKLRTSIQTLCKSALPLGKIMDYIQEDVDAMQNELQMWHSENR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LFESAWKKEKDIVSKEIEKLRTSIQTLCKSALPLGKIMDYIQEDVDAMQNELQMWHSENR
610 620 630 640 650 660
570 580 590 600 610 620
pF1KE2 QHAEALQQEQRITDCAVEPLKAELAELEQLIKDQQDKICAVKANILKNEEKIQKMVYSIN
XP_011 QHAEALQQEQRITDCAVEPLKAELAELEQLIKDQQDKICAVKANILKNEEKIQKMVYSIN
670 680 690 700 710 720
>--
initn: 428 init1: 428 opt: 428 Z-score: 228.6 bits: 52.7 E(85289): 5.4e-06
Smith-Waterman score: 428; 100.0% identity (100.0% similar) in 68 aa overlap (558-625:658-725)
530 540 550 560 570 580
pF1KE2 CKSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAELAEL
::::::::::::::::::::::::::::::
XP_011 CKSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAELAEL
630 640 650 660 670 680
590 600 610 620
pF1KE2 EQLIKDQQDKICAVKANILKNEEKIQKMVYSINLTSRR
::::::::::::::::::::::::::::::::::::::
XP_011 EQLIKDQQDKICAVKANILKNEEKIQKMVYSINLTSRR
690 700 710 720
>>XP_011509248 (OMIM: 607380,616629) PREDICTED: TRAF3-in (701 aa)
initn: 3774 init1: 2024 opt: 2031 Z-score: 987.0 bits: 192.9 E(85289): 3.1e-48
Smith-Waterman score: 3369; 83.6% identity (85.7% similar) in 657 aa overlap (1-581:1-657)
10 20 30 40 50 60
pF1KE2 MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 DRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 RDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHD
250 260 270 280 290 300
310 320
pF1KE2 KPEKKSASSGEMSKKLSDGT-----------------------------FKDSKAETE--
:::::. : . ::.:. : :. ::. :
XP_011 KPEKKTEISTRASKSLTTKTSKRRSKNSVEGRRDPKTSENSLSPEKEHNFSYCKAKKEHS
310 320 330 340 350 360
330 340 350
pF1KE2 ---------------------------------TEISTRASKSLTTKTSKRRSK------
.::.:. .. .:. : :
XP_011 MKQLGRKEDNISAKSLDSIVSGINNEPNQETTTSEIGTKEANINSTSISDDNSASLRCEN
370 380 390 400 410 420
360 370 380 390 400
pF1KE2 ---NSVE---GDSTSDAEGDAGPAGQDKSEVPETPEIPNELSSNIRRIPRPGSARPAPPR
: .: ::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IQPNPTEKQKGDSTSDAEGDAGPAGQDKSEVPETPEIPNELSSNIRRIPRPGSARPAPPR
430 440 450 460 470 480
410 420 430 440 450 460
pF1KE2 VKRQDSMEALQMDRSGSGKTVSNVITESHNSDNEEDDQFVVEAAPQLSEMSEIEMVTAVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VKRQDSMEALQMDRSGSGKTVSNVITESHNSDNEEDDQFVVEAAPQLSEMSEIEMVTAVE
490 500 510 520 530 540
470 480 490 500 510 520
pF1KE2 LEEEEKHGGLVKKILETKKDYEKLQQSPKPGEKERSLFESAWKKEKDIVSKEIEKLRTSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LEEEEKHGGLVKKILETKKDYEKLQQSPKPGEKERSLFESAWKKEKDIVSKEIEKLRTSI
550 560 570 580 590 600
530 540 550 560 570 580
pF1KE2 QTLCKSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAEL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QTLCKSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAEL
610 620 630 640 650 660
590 600 610 620
pF1KE2 AELEQLIKDQQDKICAVKANILKNEEKIQKMVYSINLTSRR
XP_011 AELEQLIKDQQDKICAVKANILKNEEKIQKMVYSINLTSRR
670 680 690 700
>>XP_011509249 (OMIM: 607380,616629) PREDICTED: TRAF3-in (681 aa)
initn: 2011 init1: 2011 opt: 2011 Z-score: 977.7 bits: 191.2 E(85289): 1e-47
Smith-Waterman score: 3115; 83.7% identity (83.7% similar) in 613 aa overlap (45-557:1-613)
20 30 40 50 60 70
pF1KE2 KVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKSDNVKDKDAKISFLQ
::::::::::::::::::::::::::::::
XP_011 MTGFMKGLYTDAEMKSDNVKDKDAKISFLQ
10 20 30
80 90 100 110 120 130
pF1KE2 KAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLSSDDAVRRVLAGEKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLSSDDAVRRVLAGEKG
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE2 EVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSRDRKQKEELKEDRKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EVKGRASLTSRSQELDNKNVREEESRVHKNTEDRGDAEIKERSTSRDRKQKEELKEDRKP
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE2 REKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERDRDSERKKETERKSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 REKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERDRDSERKKETERKSE
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE2 GGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHDKPEKKSASSGEMSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHDKPEKKSASSGEMSK
220 230 240 250 260 270
320 330 340 350
pF1KE2 KLSDGTFKDSKAETETEISTRASKSLTTKTSKRRSKNSVEG-------------------
:::::::::::::::::::::::::::::::::::::::::
XP_011 KLSDGTFKDSKAETETEISTRASKSLTTKTSKRRSKNSVEGRRDPKTSENSLSPEKEHNF
280 290 300 310 320 330
pF1KE2 ------------------------------------------------------------
XP_011 SYCKAKKEHSMKQLGRKEDNISAKSLDSIVSGINNEPNQETTTSEIGTKEANINSTSISD
340 350 360 370 380 390
360 370 380 390
pF1KE2 ---------------------DSTSDAEGDAGPAGQDKSEVPETPEIPNELSSNIRRIPR
:::::::::::::::::::::::::::::::::::::::
XP_011 DNSASLRCENIQPNPTEKQKGDSTSDAEGDAGPAGQDKSEVPETPEIPNELSSNIRRIPR
400 410 420 430 440 450
400 410 420 430 440 450
pF1KE2 PGSARPAPPRVKRQDSMEALQMDRSGSGKTVSNVITESHNSDNEEDDQFVVEAAPQLSEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGSARPAPPRVKRQDSMEALQMDRSGSGKTVSNVITESHNSDNEEDDQFVVEAAPQLSEM
460 470 480 490 500 510
460 470 480 490 500 510
pF1KE2 SEIEMVTAVELEEEEKHGGLVKKILETKKDYEKLQQSPKPGEKERSLFESAWKKEKDIVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SEIEMVTAVELEEEEKHGGLVKKILETKKDYEKLQQSPKPGEKERSLFESAWKKEKDIVS
520 530 540 550 560 570
520 530 540 550 560 570
pF1KE2 KEIEKLRTSIQTLCKSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEALQQEQRITD
:::::::::::::::::::::::::::::::::::::::::::
XP_011 KEIEKLRTSIQTLCKSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEALQQEQRITD
580 590 600 610 620 630
580 590 600 610 620
pF1KE2 CAVEPLKAELAELEQLIKDQQDKICAVKANILKNEEKIQKMVYSINLTSRR
XP_011 CAVEPLKAELAELEQLIKDQQDKICAVKANILKNEEKIQKMVYSINLTSRR
640 650 660 670 680
>--
initn: 428 init1: 428 opt: 428 Z-score: 228.9 bits: 52.6 E(85289): 5.2e-06
Smith-Waterman score: 428; 100.0% identity (100.0% similar) in 68 aa overlap (558-625:614-681)
530 540 550 560 570 580
pF1KE2 CKSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAELAEL
::::::::::::::::::::::::::::::
XP_011 CKSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAELAEL
590 600 610 620 630 640
590 600 610 620
pF1KE2 EQLIKDQQDKICAVKANILKNEEKIQKMVYSINLTSRR
::::::::::::::::::::::::::::::::::::::
XP_011 EQLIKDQQDKICAVKANILKNEEKIQKMVYSINLTSRR
650 660 670 680
>>XP_011509252 (OMIM: 607380,616629) PREDICTED: TRAF3-in (347 aa)
initn: 1764 init1: 1764 opt: 1766 Z-score: 865.2 bits: 169.4 E(85289): 1.9e-41
Smith-Waterman score: 1766; 90.9% identity (94.5% similar) in 307 aa overlap (319-625:42-347)
290 300 310 320 330 340
pF1KE2 WDLDREKNREHDKPEKKSASSGEMSKKLSDGTFKDSKAETETEISTRASKSLTTKTSKRR
: :... .. : :: : :: .. .
XP_011 TVSKIFFFSSCIPETAAYLQPLSCWVWLYWGGTKEANINS-TSISDDNSASLRCENIQPN
20 30 40 50 60 70
350 360 370 380 390 400
pF1KE2 SKNSVEGDSTSDAEGDAGPAGQDKSEVPETPEIPNELSSNIRRIPRPGSARPAPPRVKRQ
.. .::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTEKQKGDSTSDAEGDAGPAGQDKSEVPETPEIPNELSSNIRRIPRPGSARPAPPRVKRQ
80 90 100 110 120 130
410 420 430 440 450 460
pF1KE2 DSMEALQMDRSGSGKTVSNVITESHNSDNEEDDQFVVEAAPQLSEMSEIEMVTAVELEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSMEALQMDRSGSGKTVSNVITESHNSDNEEDDQFVVEAAPQLSEMSEIEMVTAVELEEE
140 150 160 170 180 190
470 480 490 500 510 520
pF1KE2 EKHGGLVKKILETKKDYEKLQQSPKPGEKERSLFESAWKKEKDIVSKEIEKLRTSIQTLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKHGGLVKKILETKKDYEKLQQSPKPGEKERSLFESAWKKEKDIVSKEIEKLRTSIQTLC
200 210 220 230 240 250
530 540 550 560 570 580
pF1KE2 KSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAELAELE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAELAELE
260 270 280 290 300 310
590 600 610 620
pF1KE2 QLIKDQQDKICAVKANILKNEEKIQKMVYSINLTSRR
:::::::::::::::::::::::::::::::::::::
XP_011 QLIKDQQDKICAVKANILKNEEKIQKMVYSINLTSRR
320 330 340
625 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 12:04:31 2016 done: Sun Nov 6 12:04:32 2016
Total Scan time: 8.290 Total Display time: 0.120
Function used was FASTA [36.3.4 Apr, 2011]