FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2018, 594 aa
  1>>>pF1KE2018 594 - 594 aa - 594 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.9648+/-0.000987; mu= 15.1174+/- 0.059
 mean_var=65.1208+/-13.282, 0's: 0 Z-trim(103.3): 28  B-trim: 0 in 0/53
 Lambda= 0.158933
 statistics sampled from 7322 (7328) to 7322 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.582), E-opt: 0.2 (0.225), width:  16
 Scan time:  3.240

The best scores are:                                      opt bits E(32554)
CCDS738.1 GLMN gene_id:11146|Hs108|chr1            ( 594) 3862 894.7       0


>>CCDS738.1 GLMN gene_id:11146|Hs108|chr1                 (594 aa)
 initn: 3862 init1: 3862 opt: 3862  Z-score: 4781.5  bits: 894.7 E(32554):    0
Smith-Waterman score: 3862; 100.0% identity (100.0% similar) in 594 aa overlap (1-594:1-594)

               10        20        30        40        50        60
pF1KE2 MAVEELQSIIKRCQILEEQDFKEEDFGLFQLAGQRCIEEGHTDQLLEIIQNEKNKVIIKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MAVEELQSIIKRCQILEEQDFKEEDFGLFQLAGQRCIEEGHTDQLLEIIQNEKNKVIIKN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 MGWNLVGPVVRCLLCKDKEDSKRKVYFLIFDLLVKLCNPKELLLGLLELIEEPSGKQISQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MGWNLVGPVVRCLLCKDKEDSKRKVYFLIFDLLVKLCNPKELLLGLLELIEEPSGKQISQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 SILLLLQPLQTVIQKLHNKAYSIGLALSTLWNQLSLLPVPYSKEQIQMDDYGLCQCCKAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SILLLLQPLQTVIQKLHNKAYSIGLALSTLWNQLSLLPVPYSKEQIQMDDYGLCQCCKAL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 IEFTKPFVEEVIDNKENSLENEKLKDELLKFCFKSLKCPLLTAQFFEQSEEGGNDPFRYF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 IEFTKPFVEEVIDNKENSLENEKLKDELLKFCFKSLKCPLLTAQFFEQSEEGGNDPFRYF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 ASEIIGFLSAIGHPFPKMIFNHGRKKRTWNYLEFEEEENKQLADSMASLAYLVFVQGIHI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ASEIIGFLSAIGHPFPKMIFNHGRKKRTWNYLEFEEEENKQLADSMASLAYLVFVQGIHI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 DQLPMVLSPLYLLQFNMGHIEVFLQRTEESVISKGLELLENSLLRIEDNSLLYQYLEIKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 DQLPMVLSPLYLLQFNMGHIEVFLQRTEESVISKGLELLENSLLRIEDNSLLYQYLEIKS
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE2 FLTVPQGLVKVMTLCPIETLRKKSLAMLQLYINKLDSQGKYTLFRCLLNTSNHSGVEAFI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 FLTVPQGLVKVMTLCPIETLRKKSLAMLQLYINKLDSQGKYTLFRCLLNTSNHSGVEAFI
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE2 IQNIKNQIDMSLKRTRNNKWFTGPQLISLLDLVLFLPEGAETDLLQNSDRIMASLNLLRY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 IQNIKNQIDMSLKRTRNNKWFTGPQLISLLDLVLFLPEGAETDLLQNSDRIMASLNLLRY
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE2 LVIKDNENDNQTGLWTELGNIENNFLKPLHIGLNMSKAHYEAEIKNSQEAQKSKDLCSIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LVIKDNENDNQTGLWTELGNIENNFLKPLHIGLNMSKAHYEAEIKNSQEAQKSKDLCSIT
              490       500       510       520       530       540

              550       560       570       580       590    
pF1KE2 VSGEEIPNMPPEMQLKVLHSALFTFDLIESVLARVEELIEIKTKSTSEENIGIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VSGEEIPNMPPEMQLKVLHSALFTFDLIESVLARVEELIEIKTKSTSEENIGIK
              550       560       570       580       590    




594 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 19:13:36 2016 done: Sun Nov  6 19:13:37 2016
 Total Scan time:  3.240 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]