Result of FASTA (ccds) for
pFN21AE1996
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1996, 575 aa
1>>>pF1KE1996 575 - 575 aa - 575 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.2274+/-0.00104; mu= 3.5295+/- 0.063
mean_var=253.8134+/-50.963, 0's: 0 Z-trim(113.3): 9 B-trim: 0 in 0/52
Lambda= 0.080504
statistics sampled from 13984 (13992) to 13984 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.755), E-opt: 0.2 (0.43), width: 16
Scan time: 3.450
The best scores are: opt bits E(32554)
CCDS14104.1 PPP2R3B gene_id:28227|Hs108|chrY ( 575) 3956 472.6 5.7e-133
CCDS14104.1 PPP2R3B gene_id:28227|Hs108|chrX ( 575) 3956 472.6 5.7e-133
CCDS3088.1 PPP2R3A gene_id:5523|Hs108|chr3 ( 529) 1980 243.1 6.5e-64
CCDS3087.1 PPP2R3A gene_id:5523|Hs108|chr3 (1150) 1980 243.4 1.2e-63
CCDS54642.1 PPP2R3A gene_id:5523|Hs108|chr3 ( 414) 1887 232.2 9.7e-61
>>CCDS14104.1 PPP2R3B gene_id:28227|Hs108|chrY (575 aa)
initn: 3956 init1: 3956 opt: 3956 Z-score: 2500.7 bits: 472.6 E(32554): 5.7e-133
Smith-Waterman score: 3956; 99.7% identity (100.0% similar) in 575 aa overlap (1-575:1-575)
10 20 30 40 50 60
pF1KE1 MPPGKVLQPVLKMKVDELFLYWLSEASTQRMLQDCLRRIKAPGRDQPTPGDGEQPGAWPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MPPGKVLQPVLKMKVDELFLYWLSEASTQRMLQDCLRRIKAPGRDQPTPGDGEQPGAWPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 APLAAPRPSGLEPPGTPGPGPALPLGAASSPRNAPHVRGTRRSAGTRVVQTRKEEPLPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 APLAAPRPSGLEPPGTPGPGPALPLGAASSPRNAPHVRGTRRSAGTRVVQTRKEEPLPPA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 TSQSIPTFYFPRGRPQDSVNVDAVISKIESTFTRFPHERATMDDMGLVAKACGCPLYWKG
::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
CCDS14 TSQSIPTFYFPRGRPQDSVNVDAVISKIESTFARFPHERATMDDMGLVAKACGCPLYWKG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 PLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 PLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 VVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 EADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 TRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 CRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 CRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDH
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 EQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETVGEPWEDGFEAELSPVEQKLSA
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS14 EQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFEAELSPVEQKLSA
490 500 510 520 530 540
550 560 570
pF1KE1 LRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
:::::::::::::::::::::::::::::::::::
CCDS14 LRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
550 560 570
>>CCDS14104.1 PPP2R3B gene_id:28227|Hs108|chrX (575 aa)
initn: 3956 init1: 3956 opt: 3956 Z-score: 2500.7 bits: 472.6 E(32554): 5.7e-133
Smith-Waterman score: 3956; 99.7% identity (100.0% similar) in 575 aa overlap (1-575:1-575)
10 20 30 40 50 60
pF1KE1 MPPGKVLQPVLKMKVDELFLYWLSEASTQRMLQDCLRRIKAPGRDQPTPGDGEQPGAWPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MPPGKVLQPVLKMKVDELFLYWLSEASTQRMLQDCLRRIKAPGRDQPTPGDGEQPGAWPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 APLAAPRPSGLEPPGTPGPGPALPLGAASSPRNAPHVRGTRRSAGTRVVQTRKEEPLPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 APLAAPRPSGLEPPGTPGPGPALPLGAASSPRNAPHVRGTRRSAGTRVVQTRKEEPLPPA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 TSQSIPTFYFPRGRPQDSVNVDAVISKIESTFTRFPHERATMDDMGLVAKACGCPLYWKG
::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
CCDS14 TSQSIPTFYFPRGRPQDSVNVDAVISKIESTFARFPHERATMDDMGLVAKACGCPLYWKG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 PLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 PLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 VVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 EADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 TRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 CRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 CRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDH
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 EQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETVGEPWEDGFEAELSPVEQKLSA
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS14 EQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFEAELSPVEQKLSA
490 500 510 520 530 540
550 560 570
pF1KE1 LRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
:::::::::::::::::::::::::::::::::::
CCDS14 LRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
550 560 570
>>CCDS3088.1 PPP2R3A gene_id:5523|Hs108|chr3 (529 aa)
initn: 2028 init1: 1980 opt: 1980 Z-score: 1260.9 bits: 243.1 E(32554): 6.5e-64
Smith-Waterman score: 2011; 62.4% identity (84.9% similar) in 458 aa overlap (74-528:53-491)
50 60 70 80 90 100
pF1KE1 RDQPTPGDGEQPGAWPTAPLAAPRPSGLEPPGTPGPGPALPLGAASSPRN---APHVRGT
:::: : :: . :::: .::: .
CCDS30 RGCDFVLPSRFKKRLKSFQQTQIQNKPEKKPGTPLPPPAT---SPSSPRPLSPVPHVNN-
30 40 50 60 70
110 120 130 140 150 160
pF1KE1 RRSAGTRVVQTRKEEPLPPATSQSIPTFYFPRGRPQDSVNVDAVISKIESTFTRFPHERA
::.. :: : .:: ::::.: :. : . ..:.::..: . ...:
CCDS30 -------VVNA----PL----SINIPRFYFPEGLPDTCSNHEQTLSRIETAFMDIEEQKA
80 90 100 110 120
170 180 190 200 210 220
pF1KE1 TMDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHL
. .:: .::.::::::::.:.: .::::.:: :....:.:::::.:.: ::::.::. :
CCDS30 DIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTAQSFIAMWRKLLNNHHDDASKFICL
130 140 150 160 170 180
230 240 250 260 270 280
pF1KE1 LMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGR
: .:.:. : ::::.:.:::::.:::::.:::.: ::::::::::::::::.:::::::.
CCDS30 LAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSWSGK
190 200 210 220 230 240
290 300 310 320 330 340
pF1KE1 ITCAELRRSSFLQNVALLEEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLA
:: .:.:.:.:::..:::::: ::::.:..:::::::::::::::::::::: :. ::.
CCDS30 ITSTEIRKSNFLQTLALLEEEEDINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLS
250 260 270 280 290 300
350 360 370 380 390 400
pF1KE1 RHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCM
:.::.: :...:.::::::::::. .::::..:::::::::::::::..:::::::::::
CCDS30 RYNDQASSSRIIERIFSGAVTRGKTIQKEGRMSYADFVWFLISEEDKRNPTSIEYWFRCM
310 320 330 340 350 360
410 420 430 440 450 460
pF1KE1 DLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKR
:.::::.:::.::::::::::.:...:.:: :::.: :::::::::: ..:::::.::::
CCDS30 DVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLKR
370 380 390 400 410 420
470 480 490 500 510 520
pF1KE1 CKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETVG
:..:..:.:::::.::::::::.. ... .: .. ::: :::...:::::. :::::..
CCDS30 CRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDWDRFAAEEYETLVAEESAQ
430 440 450 460 470 480
530 540 550 560 570
pF1KE1 EPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
...:::
CCDS30 AQFQEGFEDYETDEPASPSEFGNKSNKILSASLPEKCGKLQSVDEE
490 500 510 520
>>CCDS3087.1 PPP2R3A gene_id:5523|Hs108|chr3 (1150 aa)
initn: 2028 init1: 1980 opt: 1980 Z-score: 1256.4 bits: 243.4 E(32554): 1.2e-63
Smith-Waterman score: 2014; 58.2% identity (80.6% similar) in 505 aa overlap (27-528:632-1112)
10 20 30 40 50
pF1KE1 MPPGKVLQPVLKMKVDELFLYWLSEASTQRMLQDCLRRIKAPGRDQPTPGDGEQPG
:.: :. : . ..: . .:
CCDS30 AQELVECKSSRGSLSQEKEMMQILQETLTTSSQANLSVCRSPVGDKAKDTTSAVLIQQT-
610 620 630 640 650 660
60 70 80 90 100 110
pF1KE1 AWPTAPLAAPRPSGLEPPGTPGPGPALPLGAASSPRN---APHVRGTRRSAGTRVVQTRK
: . .: . :::: : :: . :::: .::: . ::..
CCDS30 --PEVIKIQNKPE--KKPGTPLPPPAT---SPSSPRPLSPVPHVNN--------VVNA--
670 680 690 700
120 130 140 150 160 170
pF1KE1 EEPLPPATSQSIPTFYFPRGRPQDSVNVDAVISKIESTFTRFPHERATMDDMGLVAKACG
:: : .:: ::::.: :. : . ..:.::..: . ...: . .:: .::.::
CCDS30 --PL----SINIPRFYFPEGLPDTCSNHEQTLSRIETAFMDIEEQKADIYEMGKIAKVCG
710 720 730 740 750
180 190 200 210 220 230
pF1KE1 CPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQED
::::::.:.: .::::.:: :....:.:::::.:.: ::::.::. :: .:.:. : :::
CCDS30 CPLYWKAPMFRAAGGEKTGFVTAQSFIAMWRKLLNNHHDDASKFICLLAKPNCSSLEQED
760 770 780 790 800 810
240 250 260 270 280 290
pF1KE1 FVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQ
:.:.:::::.:::::.:::.: ::::::::::::::::.:::::::.:: .:.:.:.:::
CCDS30 FIPLLQDVVDTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSWSGKITSTEIRKSNFLQ
820 830 840 850 860 870
300 310 320 330 340 350
pF1KE1 NVALLEEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMID
..:::::: ::::.:..:::::::::::::::::::::: :. ::.:.::.: :...:.
CCDS30 TLALLEEEEDINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQASSSRIIE
880 890 900 910 920 930
360 370 380 390 400 410
pF1KE1 RIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFEL
::::::::::. .::::..:::::::::::::::..::::::::::::.::::.:::.::
CCDS30 RIFSGAVTRGKTIQKEGRMSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLSMYEL
940 950 960 970 980 990
420 430 440 450 460 470
pF1KE1 EYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFN
::::::::.:...:.:: :::.: :::::::::: ..:::::.:::::..:..:.:::::
CCDS30 EYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFN
1000 1010 1020 1030 1040 1050
480 490 500 510 520 530
pF1KE1 IEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETVGEPWEDGFEAELSP
.::::::::.. ... .: .. ::: :::...:::::. :::::.. ...:::
CCDS30 LEKYLDHEQRDPFAVQKDVENDGPEPSDWDRFAAEEYETLVAEESAQAQFQEGFEDYETD
1060 1070 1080 1090 1100 1110
540 550 560 570
pF1KE1 VEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
CCDS30 EPASPSEFGNKSNKILSASLPEKCGKLQSVDEE
1120 1130 1140 1150
>>CCDS54642.1 PPP2R3A gene_id:5523|Hs108|chr3 (414 aa)
initn: 1887 init1: 1887 opt: 1887 Z-score: 1203.9 bits: 232.2 E(32554): 9.7e-61
Smith-Waterman score: 1887; 68.5% identity (91.9% similar) in 371 aa overlap (158-528:6-376)
130 140 150 160 170 180
pF1KE1 FYFPRGRPQDSVNVDAVISKIESTFTRFPHERATMDDMGLVAKACGCPLYWKGPLFYGAG
..: . .:: .::.::::::::.:.: .::
CCDS54 MDIEEQKADIYEMGKIAKVCGCPLYWKAPMFRAAG
10 20 30
190 200 210 220 230 240
pF1KE1 GERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPG
::.:: :....:.:::::.:.: ::::.::. :: .:.:. : ::::.:.:::::.::::
CCDS54 GEKTGFVTAQSFIAMWRKLLNNHHDDASKFICLLAKPNCSSLEQEDFIPLLQDVVDTHPG
40 50 60 70 80 90
250 260 270 280 290 300
pF1KE1 LSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEEEADINQL
:.:::.: ::::::::::::::::.:::::::.:: .:.:.:.:::..:::::: ::::.
CCDS54 LTFLKDAPEFHSRYITTVIQRIFYTVNRSWSGKITSTEIRKSNFLQTLALLEEEEDINQI
100 110 120 130 140 150
310 320 330 340 350 360
pF1KE1 TEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQ
:..:::::::::::::::::::::: :. ::.:.::.: :...:.::::::::::. .:
CCDS54 TDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQASSSRIIERIFSGAVTRGKTIQ
160 170 180 190 200 210
370 380 390 400 410 420
pF1KE1 KEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSM
:::..:::::::::::::::..::::::::::::.::::.:::.::::::::::.:...:
CCDS54 KEGRMSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAM
220 230 240 250 260 270
430 440 450 460 470 480
pF1KE1 AIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQIS
.:: :::.: :::::::::: ..:::::.:::::..:..:.:::::.::::::::.. ..
CCDS54 GIEPLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDHEQRDPFA
280 290 300 310 320 330
490 500 510 520 530 540
pF1KE1 LLRDGDSGGPELSDWEKYAAEEYDILVAEETVGEPWEDGFEAELSPVEQKLSALRSPLAQ
. .: .. ::: :::...:::::. :::::.. ...:::
CCDS54 VQKDVENDGPEPSDWDRFAAEEYETLVAEESAQAQFQEGFEDYETDEPASPSEFGNKSNK
340 350 360 370 380 390
550 560 570
pF1KE1 RPFFEAPSPLGAVDLYEYACGDEDLEPL
CCDS54 ILSASLPEKCGKLQSVDEE
400 410
575 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 12:53:45 2016 done: Sun Nov 6 12:53:46 2016
Total Scan time: 3.450 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]