Result of FASTA (omim) for
pFN21AE1948
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1948, 503 aa
1>>>pF1KE1948 503 - 503 aa - 503 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5896+/-0.000475; mu= 11.8329+/- 0.029
mean_var=107.6714+/-21.944, 0's: 0 Z-trim(111.9): 64 B-trim: 519 in 2/49
Lambda= 0.123602
statistics sampled from 20541 (20592) to 20541 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.602), E-opt: 0.2 (0.241), width: 16
Scan time: 9.880
The best scores are: opt bits E(85289)
NP_079540 (OMIM: 611751) THUMP domain-containing p ( 503) 3287 597.5 2.8e-170
NP_001308398 (OMIM: 611751) THUMP domain-containin ( 410) 2688 490.7 3.4e-138
NP_001308397 (OMIM: 611751) THUMP domain-containin ( 415) 2348 430.1 6.2e-120
NP_001308403 (OMIM: 611751) THUMP domain-containin ( 344) 2095 384.9 2e-106
NP_001308399 (OMIM: 611751) THUMP domain-containin ( 394) 1878 346.2 1e-94
XP_016860539 (OMIM: 611751) PREDICTED: THUMP domai ( 487) 1878 346.3 1.2e-94
NP_001308406 (OMIM: 611751) THUMP domain-containin ( 269) 1774 327.6 2.8e-89
NP_001308409 (OMIM: 611751) THUMP domain-containin ( 269) 1774 327.6 2.8e-89
NP_001308407 (OMIM: 611751) THUMP domain-containin ( 269) 1774 327.6 2.8e-89
XP_016860543 (OMIM: 611751) PREDICTED: THUMP domai ( 269) 1774 327.6 2.8e-89
NP_001308410 (OMIM: 611751) THUMP domain-containin ( 269) 1774 327.6 2.8e-89
NP_001308408 (OMIM: 611751) THUMP domain-containin ( 269) 1774 327.6 2.8e-89
NP_001308404 (OMIM: 611751) THUMP domain-containin ( 322) 1749 323.2 7.2e-88
XP_011531421 (OMIM: 611751) PREDICTED: THUMP domai ( 295) 1656 306.6 6.6e-83
XP_016860541 (OMIM: 611751) PREDICTED: THUMP domai ( 304) 1456 270.9 3.7e-72
XP_016860542 (OMIM: 611751) PREDICTED: THUMP domai ( 272) 1455 270.7 3.8e-72
XP_016860540 (OMIM: 611751) PREDICTED: THUMP domai ( 399) 1346 251.4 3.7e-66
>>NP_079540 (OMIM: 611751) THUMP domain-containing prote (503 aa)
initn: 3287 init1: 3287 opt: 3287 Z-score: 3177.9 bits: 597.5 E(85289): 2.8e-170
Smith-Waterman score: 3287; 100.0% identity (100.0% similar) in 503 aa overlap (1-503:1-503)
10 20 30 40 50 60
pF1KE1 MSEARGEPGSGPEAGARFFCTAGRGLEPFVMREVRARLAATQVEYISGKVFFTTCSDLNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 MSEARGEPGSGPEAGARFFCTAGRGLEPFVMREVRARLAATQVEYISGKVFFTTCSDLNM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LKKLKSAERLFLLIKKQFPLIISSVSKGKIFNEMQRLINEDPGSWLNAISIWKNLLELDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 LKKLKSAERLFLLIKKQFPLIISSVSKGKIFNEMQRLINEDPGSWLNAISIWKNLLELDA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KKEKLSQRDDNQLKRKVGENEIIAKKLKIEQMQKIEENRDCQLEKQIKEETLEQRDFTTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 KKEKLSQRDDNQLKRKVGENEIIAKKLKIEQMQKIEENRDCQLEKQIKEETLEQRDFTTK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 SEKFQEEEFQNDIEKAIDTHNQNDLTFRVSCRCSGTIGKAFTAQEVGKVIGIAIMKHFGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 SEKFQEEEFQNDIEKAIDTHNQNDLTFRVSCRCSGTIGKAFTAQEVGKVIGIAIMKHFGW
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 KADLRNPQLEIFIHLNDIYSVVGIPVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 KADLRNPQLEIFIHLNDIYSVVGIPVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 FVLDPMCGLGTILLEAAKEWPDVYYVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 FVLDPMCGLGTILLEAAKEWPDVYYVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LPLPSESVDIIISDIPFGKKFKLGKDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 LPLPSESVDIIISDIPFGKKFKLGKDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 ESNIPFNSKDSHTDEPGIKKCLNPEEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 ESNIPFNSKDSHTDEPGIKKCLNPEEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVEC
430 440 450 460 470 480
490 500
pF1KE1 YKVSLGKTDAFICKYKKSHSSGL
:::::::::::::::::::::::
NP_079 YKVSLGKTDAFICKYKKSHSSGL
490 500
>>NP_001308398 (OMIM: 611751) THUMP domain-containing pr (410 aa)
initn: 2688 init1: 2688 opt: 2688 Z-score: 2601.9 bits: 490.7 E(85289): 3.4e-138
Smith-Waterman score: 2688; 100.0% identity (100.0% similar) in 410 aa overlap (94-503:1-410)
70 80 90 100 110 120
pF1KE1 LKSAERLFLLIKKQFPLIISSVSKGKIFNEMQRLINEDPGSWLNAISIWKNLLELDAKKE
::::::::::::::::::::::::::::::
NP_001 MQRLINEDPGSWLNAISIWKNLLELDAKKE
10 20 30
130 140 150 160 170 180
pF1KE1 KLSQRDDNQLKRKVGENEIIAKKLKIEQMQKIEENRDCQLEKQIKEETLEQRDFTTKSEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLSQRDDNQLKRKVGENEIIAKKLKIEQMQKIEENRDCQLEKQIKEETLEQRDFTTKSEK
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE1 FQEEEFQNDIEKAIDTHNQNDLTFRVSCRCSGTIGKAFTAQEVGKVIGIAIMKHFGWKAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FQEEEFQNDIEKAIDTHNQNDLTFRVSCRCSGTIGKAFTAQEVGKVIGIAIMKHFGWKAD
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE1 LRNPQLEIFIHLNDIYSVVGIPVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGAFVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRNPQLEIFIHLNDIYSVVGIPVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGAFVL
160 170 180 190 200 210
310 320 330 340 350 360
pF1KE1 DPMCGLGTILLEAAKEWPDVYYVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIELPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DPMCGLGTILLEAAKEWPDVYYVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIELPL
220 230 240 250 260 270
370 380 390 400 410 420
pF1KE1 PSESVDIIISDIPFGKKFKLGKDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCKESN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSESVDIIISDIPFGKKFKLGKDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCKESN
280 290 300 310 320 330
430 440 450 460 470 480
pF1KE1 IPFNSKDSHTDEPGIKKCLNPEEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVECYKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPFNSKDSHTDEPGIKKCLNPEEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVECYKV
340 350 360 370 380 390
490 500
pF1KE1 SLGKTDAFICKYKKSHSSGL
::::::::::::::::::::
NP_001 SLGKTDAFICKYKKSHSSGL
400 410
>>NP_001308397 (OMIM: 611751) THUMP domain-containing pr (415 aa)
initn: 2358 init1: 2331 opt: 2348 Z-score: 2274.2 bits: 430.1 E(85289): 6.2e-120
Smith-Waterman score: 2348; 95.3% identity (96.1% similar) in 383 aa overlap (1-379:1-383)
10 20 30 40 50 60
pF1KE1 MSEARGEPGSGPEAGARFFCTAGRGLEPFVMREVRARLAATQVEYISGKVFFTTCSDLNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSEARGEPGSGPEAGARFFCTAGRGLEPFVMREVRARLAATQVEYISGKVFFTTCSDLNM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LKKLKSAERLFLLIKKQFPLIISSVSKGKIFNEMQRLINEDPGSWLNAISIWKNLLELDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKKLKSAERLFLLIKKQFPLIISSVSKGKIFNEMQRLINEDPGSWLNAISIWKNLLELDA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KKEKLSQRDDNQLKRKVGENEIIAKKLKIEQMQKIEENRDCQLEKQIKEETLEQRDFTTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKEKLSQRDDNQLKRKVGENEIIAKKLKIEQMQKIEENRDCQLEKQIKEETLEQRDFTTK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 SEKFQEEEFQNDIEKAIDTHNQNDLTFRVSCRCSGTIGKAFTAQEVGKVIGIAIMKHFGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEKFQEEEFQNDIEKAIDTHNQNDLTFRVSCRCSGTIGKAFTAQEVGKVIGIAIMKHFGW
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 KADLRNPQLEIFIHLNDIYSVVGIPVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KADLRNPQLEIFIHLNDIYSVVGIPVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 FVLDPMCGLGTILLEAAKEWPDVYYVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVLDPMCGLGTILLEAAKEWPDVYYVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIA
310 320 330 340 350 360
370 380 390 400 410
pF1KE1 ----LPLPSESVDIIISDIPFGKKFKLGKDIKSILQEMERVLHVGGTIVLLLSEDHHRRL
: : . . . ::::
NP_001 RCLIWPTPYSARFMKLPGCPFGKSEGNVESDGNCHCLQKVLILLFLTFHLGKSLS
370 380 390 400 410
>>NP_001308403 (OMIM: 611751) THUMP domain-containing pr (344 aa)
initn: 2126 init1: 2095 opt: 2095 Z-score: 2031.6 bits: 384.9 E(85289): 2e-106
Smith-Waterman score: 2095; 99.1% identity (99.7% similar) in 324 aa overlap (1-324:1-324)
10 20 30 40 50 60
pF1KE1 MSEARGEPGSGPEAGARFFCTAGRGLEPFVMREVRARLAATQVEYISGKVFFTTCSDLNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSEARGEPGSGPEAGARFFCTAGRGLEPFVMREVRARLAATQVEYISGKVFFTTCSDLNM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LKKLKSAERLFLLIKKQFPLIISSVSKGKIFNEMQRLINEDPGSWLNAISIWKNLLELDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKKLKSAERLFLLIKKQFPLIISSVSKGKIFNEMQRLINEDPGSWLNAISIWKNLLELDA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KKEKLSQRDDNQLKRKVGENEIIAKKLKIEQMQKIEENRDCQLEKQIKEETLEQRDFTTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKEKLSQRDDNQLKRKVGENEIIAKKLKIEQMQKIEENRDCQLEKQIKEETLEQRDFTTK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 SEKFQEEEFQNDIEKAIDTHNQNDLTFRVSCRCSGTIGKAFTAQEVGKVIGIAIMKHFGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEKFQEEEFQNDIEKAIDTHNQNDLTFRVSCRCSGTIGKAFTAQEVGKVIGIAIMKHFGW
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 KADLRNPQLEIFIHLNDIYSVVGIPVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KADLRNPQLEIFIHLNDIYSVVGIPVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 FVLDPMCGLGTILLEAAKEWPDVYYVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIE
:::::::::::::::::::::. .
NP_001 FVLDPMCGLGTILLEAAKEWPNCHCLQKVLILLFLTFHLGKSLS
310 320 330 340
>>NP_001308399 (OMIM: 611751) THUMP domain-containing pr (394 aa)
initn: 1836 init1: 1836 opt: 1878 Z-score: 1821.6 bits: 346.2 E(85289): 1e-94
Smith-Waterman score: 2536; 96.1% identity (96.1% similar) in 410 aa overlap (94-503:1-394)
70 80 90 100 110 120
pF1KE1 LKSAERLFLLIKKQFPLIISSVSKGKIFNEMQRLINEDPGSWLNAISIWKNLLELDAKKE
::::::::::::::::::::::::::::::
NP_001 MQRLINEDPGSWLNAISIWKNLLELDAKKE
10 20 30
130 140 150 160 170 180
pF1KE1 KLSQRDDNQLKRKVGENEIIAKKLKIEQMQKIEENRDCQLEKQIKEETLEQRDFTTKSEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLSQRDDNQLKRKVGENEIIAKKLKIEQMQKIEENRDCQLEKQIKEETLEQRDFTTKSEK
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE1 FQEEEFQNDIEKAIDTHNQNDLTFRVSCRCSGTIGKAFTAQEVGKVIGIAIMKHFGWKAD
::::::::::::::::::::::::: :::::::::::::::::::
NP_001 FQEEEFQNDIEKAIDTHNQNDLTFR----------------EVGKVIGIAIMKHFGWKAD
100 110 120 130
250 260 270 280 290 300
pF1KE1 LRNPQLEIFIHLNDIYSVVGIPVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGAFVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRNPQLEIFIHLNDIYSVVGIPVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGAFVL
140 150 160 170 180 190
310 320 330 340 350 360
pF1KE1 DPMCGLGTILLEAAKEWPDVYYVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIELPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DPMCGLGTILLEAAKEWPDVYYVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIELPL
200 210 220 230 240 250
370 380 390 400 410 420
pF1KE1 PSESVDIIISDIPFGKKFKLGKDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCKESN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSESVDIIISDIPFGKKFKLGKDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCKESN
260 270 280 290 300 310
430 440 450 460 470 480
pF1KE1 IPFNSKDSHTDEPGIKKCLNPEEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVECYKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPFNSKDSHTDEPGIKKCLNPEEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVECYKV
320 330 340 350 360 370
490 500
pF1KE1 SLGKTDAFICKYKKSHSSGL
::::::::::::::::::::
NP_001 SLGKTDAFICKYKKSHSSGL
380 390
>>XP_016860539 (OMIM: 611751) PREDICTED: THUMP domain-co (487 aa)
initn: 1836 init1: 1836 opt: 1878 Z-score: 1820.2 bits: 346.3 E(85289): 1.2e-94
Smith-Waterman score: 3135; 96.8% identity (96.8% similar) in 503 aa overlap (1-503:1-487)
10 20 30 40 50 60
pF1KE1 MSEARGEPGSGPEAGARFFCTAGRGLEPFVMREVRARLAATQVEYISGKVFFTTCSDLNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSEARGEPGSGPEAGARFFCTAGRGLEPFVMREVRARLAATQVEYISGKVFFTTCSDLNM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LKKLKSAERLFLLIKKQFPLIISSVSKGKIFNEMQRLINEDPGSWLNAISIWKNLLELDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKKLKSAERLFLLIKKQFPLIISSVSKGKIFNEMQRLINEDPGSWLNAISIWKNLLELDA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KKEKLSQRDDNQLKRKVGENEIIAKKLKIEQMQKIEENRDCQLEKQIKEETLEQRDFTTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKEKLSQRDDNQLKRKVGENEIIAKKLKIEQMQKIEENRDCQLEKQIKEETLEQRDFTTK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 SEKFQEEEFQNDIEKAIDTHNQNDLTFRVSCRCSGTIGKAFTAQEVGKVIGIAIMKHFGW
:::::::::::::::::::::::::::: ::::::::::::::::
XP_016 SEKFQEEEFQNDIEKAIDTHNQNDLTFR----------------EVGKVIGIAIMKHFGW
190 200 210 220
250 260 270 280 290 300
pF1KE1 KADLRNPQLEIFIHLNDIYSVVGIPVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KADLRNPQLEIFIHLNDIYSVVGIPVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGA
230 240 250 260 270 280
310 320 330 340 350 360
pF1KE1 FVLDPMCGLGTILLEAAKEWPDVYYVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FVLDPMCGLGTILLEAAKEWPDVYYVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIE
290 300 310 320 330 340
370 380 390 400 410 420
pF1KE1 LPLPSESVDIIISDIPFGKKFKLGKDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPLPSESVDIIISDIPFGKKFKLGKDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCK
350 360 370 380 390 400
430 440 450 460 470 480
pF1KE1 ESNIPFNSKDSHTDEPGIKKCLNPEEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ESNIPFNSKDSHTDEPGIKKCLNPEEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVEC
410 420 430 440 450 460
490 500
pF1KE1 YKVSLGKTDAFICKYKKSHSSGL
:::::::::::::::::::::::
XP_016 YKVSLGKTDAFICKYKKSHSSGL
470 480
>>NP_001308406 (OMIM: 611751) THUMP domain-containing pr (269 aa)
initn: 1774 init1: 1774 opt: 1774 Z-score: 1723.8 bits: 327.6 E(85289): 2.8e-89
Smith-Waterman score: 1774; 100.0% identity (100.0% similar) in 269 aa overlap (235-503:1-269)
210 220 230 240 250 260
pF1KE1 LTFRVSCRCSGTIGKAFTAQEVGKVIGIAIMKHFGWKADLRNPQLEIFIHLNDIYSVVGI
::::::::::::::::::::::::::::::
NP_001 MKHFGWKADLRNPQLEIFIHLNDIYSVVGI
10 20 30
270 280 290 300 310 320
pF1KE1 PVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGAFVLDPMCGLGTILLEAAKEWPDVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGAFVLDPMCGLGTILLEAAKEWPDVY
40 50 60 70 80 90
330 340 350 360 370 380
pF1KE1 YVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIELPLPSESVDIIISDIPFGKKFKLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIELPLPSESVDIIISDIPFGKKFKLG
100 110 120 130 140 150
390 400 410 420 430 440
pF1KE1 KDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCKESNIPFNSKDSHTDEPGIKKCLNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCKESNIPFNSKDSHTDEPGIKKCLNP
160 170 180 190 200 210
450 460 470 480 490 500
pF1KE1 EEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVECYKVSLGKTDAFICKYKKSHSSGL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVECYKVSLGKTDAFICKYKKSHSSGL
220 230 240 250 260
>>NP_001308409 (OMIM: 611751) THUMP domain-containing pr (269 aa)
initn: 1774 init1: 1774 opt: 1774 Z-score: 1723.8 bits: 327.6 E(85289): 2.8e-89
Smith-Waterman score: 1774; 100.0% identity (100.0% similar) in 269 aa overlap (235-503:1-269)
210 220 230 240 250 260
pF1KE1 LTFRVSCRCSGTIGKAFTAQEVGKVIGIAIMKHFGWKADLRNPQLEIFIHLNDIYSVVGI
::::::::::::::::::::::::::::::
NP_001 MKHFGWKADLRNPQLEIFIHLNDIYSVVGI
10 20 30
270 280 290 300 310 320
pF1KE1 PVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGAFVLDPMCGLGTILLEAAKEWPDVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGAFVLDPMCGLGTILLEAAKEWPDVY
40 50 60 70 80 90
330 340 350 360 370 380
pF1KE1 YVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIELPLPSESVDIIISDIPFGKKFKLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIELPLPSESVDIIISDIPFGKKFKLG
100 110 120 130 140 150
390 400 410 420 430 440
pF1KE1 KDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCKESNIPFNSKDSHTDEPGIKKCLNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCKESNIPFNSKDSHTDEPGIKKCLNP
160 170 180 190 200 210
450 460 470 480 490 500
pF1KE1 EEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVECYKVSLGKTDAFICKYKKSHSSGL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVECYKVSLGKTDAFICKYKKSHSSGL
220 230 240 250 260
>>NP_001308407 (OMIM: 611751) THUMP domain-containing pr (269 aa)
initn: 1774 init1: 1774 opt: 1774 Z-score: 1723.8 bits: 327.6 E(85289): 2.8e-89
Smith-Waterman score: 1774; 100.0% identity (100.0% similar) in 269 aa overlap (235-503:1-269)
210 220 230 240 250 260
pF1KE1 LTFRVSCRCSGTIGKAFTAQEVGKVIGIAIMKHFGWKADLRNPQLEIFIHLNDIYSVVGI
::::::::::::::::::::::::::::::
NP_001 MKHFGWKADLRNPQLEIFIHLNDIYSVVGI
10 20 30
270 280 290 300 310 320
pF1KE1 PVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGAFVLDPMCGLGTILLEAAKEWPDVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGAFVLDPMCGLGTILLEAAKEWPDVY
40 50 60 70 80 90
330 340 350 360 370 380
pF1KE1 YVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIELPLPSESVDIIISDIPFGKKFKLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIELPLPSESVDIIISDIPFGKKFKLG
100 110 120 130 140 150
390 400 410 420 430 440
pF1KE1 KDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCKESNIPFNSKDSHTDEPGIKKCLNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCKESNIPFNSKDSHTDEPGIKKCLNP
160 170 180 190 200 210
450 460 470 480 490 500
pF1KE1 EEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVECYKVSLGKTDAFICKYKKSHSSGL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVECYKVSLGKTDAFICKYKKSHSSGL
220 230 240 250 260
>>XP_016860543 (OMIM: 611751) PREDICTED: THUMP domain-co (269 aa)
initn: 1774 init1: 1774 opt: 1774 Z-score: 1723.8 bits: 327.6 E(85289): 2.8e-89
Smith-Waterman score: 1774; 100.0% identity (100.0% similar) in 269 aa overlap (235-503:1-269)
210 220 230 240 250 260
pF1KE1 LTFRVSCRCSGTIGKAFTAQEVGKVIGIAIMKHFGWKADLRNPQLEIFIHLNDIYSVVGI
::::::::::::::::::::::::::::::
XP_016 MKHFGWKADLRNPQLEIFIHLNDIYSVVGI
10 20 30
270 280 290 300 310 320
pF1KE1 PVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGAFVLDPMCGLGTILLEAAKEWPDVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGAFVLDPMCGLGTILLEAAKEWPDVY
40 50 60 70 80 90
330 340 350 360 370 380
pF1KE1 YVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIELPLPSESVDIIISDIPFGKKFKLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIELPLPSESVDIIISDIPFGKKFKLG
100 110 120 130 140 150
390 400 410 420 430 440
pF1KE1 KDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCKESNIPFNSKDSHTDEPGIKKCLNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCKESNIPFNSKDSHTDEPGIKKCLNP
160 170 180 190 200 210
450 460 470 480 490 500
pF1KE1 EEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVECYKVSLGKTDAFICKYKKSHSSGL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVECYKVSLGKTDAFICKYKKSHSSGL
220 230 240 250 260
503 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 18:30:51 2016 done: Sun Nov 6 18:30:52 2016
Total Scan time: 9.880 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]