Result of FASTA (omim) for
pFN21AE1941
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1941, 491 aa
1>>>pF1KE1941 491 - 491 aa - 491 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8000+/-0.00041; mu= 15.0893+/- 0.025
mean_var=65.4534+/-12.993, 0's: 0 Z-trim(110.5): 27 B-trim: 57 in 2/50
Lambda= 0.158529
statistics sampled from 18863 (18868) to 18863 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.585), E-opt: 0.2 (0.221), width: 16
Scan time: 8.540
The best scores are: opt bits E(85289)
NP_005737 (OMIM: 608764) nicotinamide phosphoribos ( 491) 3254 753.4 3.2e-217
XP_005250157 (OMIM: 608764) PREDICTED: nicotinamid ( 491) 3254 753.4 3.2e-217
>>NP_005737 (OMIM: 608764) nicotinamide phosphoribosyltr (491 aa)
initn: 3254 init1: 3254 opt: 3254 Z-score: 4020.8 bits: 753.4 E(85289): 3.2e-217
Smith-Waterman score: 3254; 100.0% identity (100.0% similar) in 491 aa overlap (1-491:1-491)
10 20 30 40 50 60
pF1KE1 MNPAAEAEFNILLATDSYKVTHYKQYPPNTSKVYSYFECREKKTENSKLRKVKYEETVFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MNPAAEAEFNILLATDSYKVTHYKQYPPNTSKVYSYFECREKKTENSKLRKVKYEETVFY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GLQYILNKYLKGKVVTKEKIQEAKDVYKEHFQDDVFNEKGWNYILEKYDGHLPIEIKAVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GLQYILNKYLKGKVVTKEKIQEAKDVYKEHFQDDVFNEKGWNYILEKYDGHLPIEIKAVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 EGFVIPRGNVLFTVENTDPECYWLTNWIETILVQSWYPITVATNSREQKKILAKYLLETS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 EGFVIPRGNVLFTVENTDPECYWLTNWIETILVQSWYPITVATNSREQKKILAKYLLETS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GNLDGLEYKLHDFGYRGVSSQETAGIGASAHLVNFKGTDTVAGLALIKKYYGTKDPVPGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GNLDGLEYKLHDFGYRGVSSQETAGIGASAHLVNFKGTDTVAGLALIKKYYGTKDPVPGY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SVPAAEHSTITAWGKDHEKDAFEHIVTQFSSVPVSVVSDSYDIYNACEKIWGEDLRHLIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SVPAAEHSTITAWGKDHEKDAFEHIVTQFSSVPVSVVSDSYDIYNACEKIWGEDLRHLIV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 SRSTQAPLIIRPDSGNPLDTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SRSTQAPLIIRPDSGNPLDTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LQEIVEGMKQKMWSIENIAFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LQEIVEGMKQKMWSIENIAFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVAD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 PNKRSKKGRLSLHRTPAGNFVTLEEGKGDLEEYGQDLLHTVFKNGKVTKSYSFDEIRKNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PNKRSKKGRLSLHRTPAGNFVTLEEGKGDLEEYGQDLLHTVFKNGKVTKSYSFDEIRKNA
430 440 450 460 470 480
490
pF1KE1 QLNIELEAAHH
:::::::::::
NP_005 QLNIELEAAHH
490
>>XP_005250157 (OMIM: 608764) PREDICTED: nicotinamide ph (491 aa)
initn: 3254 init1: 3254 opt: 3254 Z-score: 4020.8 bits: 753.4 E(85289): 3.2e-217
Smith-Waterman score: 3254; 100.0% identity (100.0% similar) in 491 aa overlap (1-491:1-491)
10 20 30 40 50 60
pF1KE1 MNPAAEAEFNILLATDSYKVTHYKQYPPNTSKVYSYFECREKKTENSKLRKVKYEETVFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MNPAAEAEFNILLATDSYKVTHYKQYPPNTSKVYSYFECREKKTENSKLRKVKYEETVFY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GLQYILNKYLKGKVVTKEKIQEAKDVYKEHFQDDVFNEKGWNYILEKYDGHLPIEIKAVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GLQYILNKYLKGKVVTKEKIQEAKDVYKEHFQDDVFNEKGWNYILEKYDGHLPIEIKAVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 EGFVIPRGNVLFTVENTDPECYWLTNWIETILVQSWYPITVATNSREQKKILAKYLLETS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EGFVIPRGNVLFTVENTDPECYWLTNWIETILVQSWYPITVATNSREQKKILAKYLLETS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GNLDGLEYKLHDFGYRGVSSQETAGIGASAHLVNFKGTDTVAGLALIKKYYGTKDPVPGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GNLDGLEYKLHDFGYRGVSSQETAGIGASAHLVNFKGTDTVAGLALIKKYYGTKDPVPGY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SVPAAEHSTITAWGKDHEKDAFEHIVTQFSSVPVSVVSDSYDIYNACEKIWGEDLRHLIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVPAAEHSTITAWGKDHEKDAFEHIVTQFSSVPVSVVSDSYDIYNACEKIWGEDLRHLIV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 SRSTQAPLIIRPDSGNPLDTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SRSTQAPLIIRPDSGNPLDTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LQEIVEGMKQKMWSIENIAFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LQEIVEGMKQKMWSIENIAFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVAD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 PNKRSKKGRLSLHRTPAGNFVTLEEGKGDLEEYGQDLLHTVFKNGKVTKSYSFDEIRKNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PNKRSKKGRLSLHRTPAGNFVTLEEGKGDLEEYGQDLLHTVFKNGKVTKSYSFDEIRKNA
430 440 450 460 470 480
490
pF1KE1 QLNIELEAAHH
:::::::::::
XP_005 QLNIELEAAHH
490
491 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 16:20:17 2016 done: Sun Nov 6 16:20:18 2016
Total Scan time: 8.540 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]