Result of FASTA (ccds) for
pFN21AE1910
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1910, 444 aa
1>>>pF1KE1910 444 - 444 aa - 444 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7258+/-0.000923; mu= 15.2676+/- 0.056
mean_var=68.5784+/-13.799, 0's: 0 Z-trim(105.8): 37 B-trim: 151 in 1/50
Lambda= 0.154875
statistics sampled from 8559 (8596) to 8559 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.633), E-opt: 0.2 (0.264), width: 16
Scan time: 2.660
The best scores are: opt bits E(32554)
CCDS12168.1 TUBB4A gene_id:10382|Hs108|chr19 ( 444) 2983 675.6 2.6e-194
CCDS7039.1 TUBB4B gene_id:10383|Hs108|chr9 ( 445) 2944 666.9 1.1e-191
CCDS4687.1 TUBB gene_id:203068|Hs108|chr6 ( 444) 2893 655.5 3e-188
CCDS4485.1 TUBB2B gene_id:347733|Hs108|chr6 ( 445) 2885 653.7 1e-187
CCDS4484.1 TUBB2A gene_id:7280|Hs108|chr6 ( 445) 2866 649.5 1.9e-186
CCDS10988.1 TUBB3 gene_id:10381|Hs108|chr16 ( 450) 2787 631.9 4e-181
CCDS11858.1 TUBB6 gene_id:84617|Hs108|chr18 ( 446) 2776 629.4 2.2e-180
CCDS7051.1 TUBB8 gene_id:347688|Hs108|chr10 ( 444) 2749 623.4 1.4e-178
CCDS13475.1 TUBB1 gene_id:81027|Hs108|chr20 ( 451) 2424 550.7 1.1e-156
CCDS78124.1 TUBB gene_id:203068|Hs108|chr6 ( 372) 2418 549.4 2.3e-156
CCDS56012.1 TUBB3 gene_id:10381|Hs108|chr16 ( 378) 2351 534.4 7.3e-152
CCDS31792.1 TUBA1B gene_id:10376|Hs108|chr12 ( 451) 1290 297.4 2e-80
CCDS8781.1 TUBA1A gene_id:7846|Hs108|chr12 ( 451) 1282 295.6 6.8e-80
CCDS58227.1 TUBA1A gene_id:7846|Hs108|chr12 ( 451) 1282 295.6 6.8e-80
CCDS8782.1 TUBA1C gene_id:84790|Hs108|chr12 ( 449) 1273 293.6 2.7e-79
CCDS76556.1 TUBA1C gene_id:84790|Hs108|chr12 ( 519) 1266 292.0 9.2e-79
CCDS2438.1 TUBA4A gene_id:7277|Hs108|chr2 ( 448) 1261 290.9 1.8e-78
CCDS9284.1 TUBA3C gene_id:7278|Hs108|chr13 ( 450) 1253 289.1 6.1e-78
CCDS33290.1 TUBA3D gene_id:113457|Hs108|chr2 ( 450) 1253 289.1 6.1e-78
CCDS13751.1 TUBA8 gene_id:51807|Hs108|chr22 ( 449) 1238 285.7 6.2e-77
CCDS2158.1 TUBA3E gene_id:112714|Hs108|chr2 ( 450) 1227 283.3 3.4e-76
CCDS63131.1 TUBA4A gene_id:7277|Hs108|chr2 ( 433) 1212 279.9 3.4e-75
CCDS58226.1 TUBA1A gene_id:7846|Hs108|chr12 ( 416) 1178 272.3 6.3e-73
CCDS54495.1 TUBA8 gene_id:51807|Hs108|chr22 ( 383) 1079 250.2 2.7e-66
CCDS53491.1 TUBAL3 gene_id:79861|Hs108|chr10 ( 406) 1072 248.6 8.3e-66
CCDS7066.2 TUBAL3 gene_id:79861|Hs108|chr10 ( 446) 1072 248.7 9e-66
CCDS11433.1 TUBG1 gene_id:7283|Hs108|chr17 ( 451) 1003 233.2 4e-61
CCDS32658.1 TUBG2 gene_id:27175|Hs108|chr17 ( 451) 993 231.0 1.9e-60
CCDS77153.1 TUBB6 gene_id:84617|Hs108|chr18 ( 104) 557 133.3 1.1e-31
CCDS5100.1 TUBE1 gene_id:51175|Hs108|chr6 ( 475) 519 125.1 1.5e-28
CCDS54154.1 TUBD1 gene_id:51174|Hs108|chr17 ( 396) 463 112.6 7.5e-25
CCDS11620.1 TUBD1 gene_id:51174|Hs108|chr17 ( 453) 463 112.6 8.4e-25
CCDS54152.1 TUBD1 gene_id:51174|Hs108|chr17 ( 351) 439 107.2 2.8e-23
CCDS54153.1 TUBD1 gene_id:51174|Hs108|chr17 ( 398) 439 107.2 3.1e-23
>>CCDS12168.1 TUBB4A gene_id:10382|Hs108|chr19 (444 aa)
initn: 2983 init1: 2983 opt: 2983 Z-score: 3601.9 bits: 675.6 E(32554): 2.6e-194
Smith-Waterman score: 2983; 100.0% identity (100.0% similar) in 444 aa overlap (1-444:1-444)
10 20 30 40 50 60
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
370 380 390 400 410 420
430 440
pF1KE1 EYQQYQDATAEEGEFEEEAEEEVA
::::::::::::::::::::::::
CCDS12 EYQQYQDATAEEGEFEEEAEEEVA
430 440
>>CCDS7039.1 TUBB4B gene_id:10383|Hs108|chr9 (445 aa)
initn: 2893 init1: 2893 opt: 2944 Z-score: 3554.8 bits: 666.9 E(32554): 1.1e-191
Smith-Waterman score: 2944; 98.4% identity (99.8% similar) in 445 aa overlap (1-444:1-445)
10 20 30 40 50 60
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::
CCDS70 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
CCDS70 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS70 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS70 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS70 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG
:::::::::::::::::::::::::::::::.::.:::::::::::::::::::::::::
CCDS70 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS70 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
370 380 390 400 410 420
430 440
pF1KE1 EYQQYQDATAEE-GEFEEEAEEEVA
:::::::::::: ::::::::::::
CCDS70 EYQQYQDATAEEEGEFEEEAEEEVA
430 440
>>CCDS4687.1 TUBB gene_id:203068|Hs108|chr6 (444 aa)
initn: 2909 init1: 2872 opt: 2893 Z-score: 3493.2 bits: 655.5 E(32554): 3e-188
Smith-Waterman score: 2893; 96.8% identity (99.3% similar) in 443 aa overlap (1-442:1-443)
10 20 30 40 50 60
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV
::::::.:::::::::::::::::::::::::::::::::::::.::.:::::::::.::
CCDS46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV
:::.::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
CCDS46 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS46 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::
CCDS46 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG
:::::::::::::::::::::::::::::::.::.:::::::::::::::::::::::::
CCDS46 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
370 380 390 400 410 420
430 440
pF1KE1 EYQQYQDATAEEGE-FEEEAEEEVA
:::::::::::: : : ::::::
CCDS46 EYQQYQDATAEEEEDFGEEAEEEA
430 440
>>CCDS4485.1 TUBB2B gene_id:347733|Hs108|chr6 (445 aa)
initn: 2892 init1: 2860 opt: 2885 Z-score: 3483.6 bits: 653.7 E(32554): 1e-187
Smith-Waterman score: 2885; 95.5% identity (99.1% similar) in 445 aa overlap (1-444:1-445)
10 20 30 40 50 60
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV
::::::.:::::::::::::::::::::::::::.:::::::::::::::::::::..::
CCDS44 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV
:::.::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
CCDS44 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV
:::.::::::::::::::::::::::::::::::::::.::::::::::.::::::::::
CCDS44 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
CCDS44 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG
:::::::::::::::.:::::::::::::::.::.:::::::::::::::::::::::::
CCDS44 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
370 380 390 400 410 420
430 440
pF1KE1 EYQQYQDATAEE-GEFEEEAEEEVA
::::::::::.: :::::: :. :
CCDS44 EYQQYQDATADEQGEFEEEEGEDEA
430 440
>>CCDS4484.1 TUBB2A gene_id:7280|Hs108|chr6 (445 aa)
initn: 2873 init1: 2841 opt: 2866 Z-score: 3460.6 bits: 649.5 E(32554): 1.9e-186
Smith-Waterman score: 2866; 95.1% identity (98.9% similar) in 445 aa overlap (1-444:1-445)
10 20 30 40 50 60
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV
::::::.:::::::::::::::::::::::::::.:::::::::::::::::::.:..::
CCDS44 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV
:::.::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
CCDS44 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV
:::.::::::::::::::::::::::::::::::::::.::::::::::.::::::::::
CCDS44 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
CCDS44 EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
CCDS44 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG
:::::::::::::::.:::::::::::::::.::.:::::::::::::::::::::::::
CCDS44 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
370 380 390 400 410 420
430 440
pF1KE1 EYQQYQDATAEE-GEFEEEAEEEVA
::::::::::.: :::::: :. :
CCDS44 EYQQYQDATADEQGEFEEEEGEDEA
430 440
>>CCDS10988.1 TUBB3 gene_id:10381|Hs108|chr16 (450 aa)
initn: 2768 init1: 2768 opt: 2787 Z-score: 3365.2 bits: 631.9 E(32554): 4e-181
Smith-Waterman score: 2787; 92.3% identity (98.2% similar) in 443 aa overlap (1-442:1-443)
10 20 30 40 50 60
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV
::::::.:::::::::::::::::::::::::.:.: ::::::::::.::::::.. .::
CCDS10 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV
:::.::::::::::::::: ::..::::::.:::::::::::::::::::::::.:::::
CCDS10 PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV
::: :.::::::::::::::::::::::::::::.:::.:::::::::::::::::::::
CCDS10 RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
::::::::.::::::::::::::::::::::::::::.:::::::::::::::::::: :
CCDS10 EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
CCDS10 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG
::::::::::::::.::::::::::::::::..:::::::::::::::::.:::::::::
CCDS10 AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
:::..:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
370 380 390 400 410 420
430 440
pF1KE1 EYQQYQDATAEE-GEFEEEAEEEVA
:::::::::::: ::. :. :::
CCDS10 EYQQYQDATAEEEGEMYEDDEEESEAQGPK
430 440 450
>>CCDS11858.1 TUBB6 gene_id:84617|Hs108|chr18 (446 aa)
initn: 2772 init1: 2772 opt: 2776 Z-score: 3351.9 bits: 629.4 E(32554): 2.2e-180
Smith-Waterman score: 2776; 92.3% identity (97.5% similar) in 443 aa overlap (1-441:1-443)
10 20 30 40 50 60
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV
::::::.::::::::::.::::::::::::::.: : ::: ::::::::::::... .::
CCDS11 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV
:::.:::::::::::::::::::.::::::.:::.:::::::::::::::::::::::::
CCDS11 PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV
::: : :::::::::::::::::::::::::::::::::::::::::::.::::::::::
CCDS11 RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :
CCDS11 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
CCDS11 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG
::::::::::::::.:::: :::::::::::..:::::::::::::::::.:::::::::
CCDS11 AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
::::.::::::::::::::::::::.:::::::::::.::::::::::::::::::::::
CCDS11 LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS
370 380 390 400 410 420
430 440
pF1KE1 EYQQYQDATAEEGE--FEEEAEEEVA
::::::::::..:: ::.: ::
CCDS11 EYQQYQDATANDGEEAFEDEEEEIDG
430 440
>>CCDS7051.1 TUBB8 gene_id:347688|Hs108|chr10 (444 aa)
initn: 2749 init1: 2749 opt: 2749 Z-score: 3319.4 bits: 623.4 E(32554): 1.4e-178
Smith-Waterman score: 2749; 89.9% identity (96.8% similar) in 444 aa overlap (1-444:1-444)
10 20 30 40 50 60
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV
::::: : :::::::::::::::::::.:: .::::::: :::::::::::::.:: ::
CCDS70 MREIVLTQIGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQLERINVYYNEASGGRYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV
:::::::::::::::::::::::.::::::.::: :::::::::::::::::...:.:::
CCDS70 PRAVLVDLEPGTMDSVRSGPFGQVFRPDNFIFGQCGAGNNWAKGHYTEGAELMESVMDVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV
:::::::::::::::::::::::::::::::.::::::.::::.::::..::::::::::
CCDS70 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
::::::::::::.::.:::.::::::::::: .:::: ::::::::::::::::::::::
CCDS70 EPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVSATMSGVTTCL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
:::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::
CCDS70 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG
::::::::::::.::.::::: :.::::::...:.::::::..:.:::::::::::::::
CCDS70 AACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
:::.::::::.:::::::::.:::::::::::::::::::::::::::::::::::::::
CCDS70 LKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
370 380 390 400 410 420
430 440
pF1KE1 EYQQYQDATAEEGEFEEEAEEEVA
:::::::::::: : :: ::::::
CCDS70 EYQQYQDATAEEEEDEEYAEEEVA
430 440
>>CCDS13475.1 TUBB1 gene_id:81027|Hs108|chr20 (451 aa)
initn: 2417 init1: 2417 opt: 2424 Z-score: 2926.8 bits: 550.7 E(32554): 1.1e-156
Smith-Waterman score: 2424; 79.1% identity (92.8% similar) in 445 aa overlap (1-442:1-445)
10 20 30 40 50 60
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV
::::::.: :::::::::::::.:..::::: .:. .: : ::::::.:::::: : .::
CCDS13 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV
:::::::::::::::.::. .: .:.::.:: :.::::::::::::::::::.. ::.::
CCDS13 PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV
:.:.::::::::::..:::::::::::::::..:::::.::::::.:::.::::::::::
CCDS13 RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
:::::.::.:::.::.: .:::::::::::::::::::::::::::::: ::::.:: :
CCDS13 EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
::::::::::::::::::::::::::::::::::..::::::::.: :::::::::.: :
CCDS13 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG
:::: :.::::::: .:::.:: ::::.:.::::..::: ::::::::::.:::::::::
CCDS13 AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
:.::::::::.:::::.:.:.::.:.:::.::::.::::.:::: :: :::.:..::::
CCDS13 LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS
370 380 390 400 410 420
430 440
pF1KE1 EYQQYQDATA---EEGEFEEEAEEEVA
::::.::: : :. : :::: :
CCDS13 EYQQFQDAKAVLEEDEEVTEEAEMEPEDKGH
430 440 450
>>CCDS78124.1 TUBB gene_id:203068|Hs108|chr6 (372 aa)
initn: 2434 init1: 2397 opt: 2418 Z-score: 2920.9 bits: 549.4 E(32554): 2.3e-156
Smith-Waterman score: 2418; 97.6% identity (99.2% similar) in 371 aa overlap (73-442:1-371)
50 60 70 80 90 100
pF1KE1 QLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA
::::::::::::::::::::::::::::::
CCDS78 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWA
10 20 30
110 120 130 140 150 160
pF1KE1 KGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDR
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::.:::
CCDS78 KGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDR
40 50 60 70 80 90
170 180 190 200 210 220
pF1KE1 IMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 IMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTY
100 110 120 130 140 150
230 240 250 260 270 280
pF1KE1 GDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 GDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYR
160 170 180 190 200 210
290 300 310 320 330 340
pF1KE1 ALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFV
::::::::::.::::::::::::::::::::::::::::::::::::::.::.:::::::
CCDS78 ALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFV
220 230 240 250 260 270
350 360 370 380 390 400
pF1KE1 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG
::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
CCDS78 EWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG
280 290 300 310 320 330
410 420 430 440
pF1KE1 MDEMEFTEAESNMNDLVSEYQQYQDATAEEGE-FEEEAEEEVA
:::::::::::::::::::::::::::::: : : ::::::
CCDS78 MDEMEFTEAESNMNDLVSEYQQYQDATAEEEEDFGEEAEEEA
340 350 360 370
444 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 13:30:53 2016 done: Sun Nov 6 13:30:54 2016
Total Scan time: 2.660 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]