Result of FASTA (ccds) for
pFN21AE1899
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1899, 825 aa
1>>>pF1KE1899 825 - 825 aa - 825 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.7366+/-0.000873; mu= 7.1499+/- 0.053
mean_var=230.6349+/-46.877, 0's: 0 Z-trim(115.1): 19 B-trim: 151 in 1/53
Lambda= 0.084452
statistics sampled from 15591 (15608) to 15591 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.793), E-opt: 0.2 (0.479), width: 16
Scan time: 4.320
The best scores are: opt bits E(32554)
CCDS10629.1 IL4R gene_id:3566|Hs108|chr16 ( 825) 5819 722.2 8.6e-208
CCDS58441.1 IL4R gene_id:3566|Hs108|chr16 ( 810) 5660 702.9 5.7e-202
>>CCDS10629.1 IL4R gene_id:3566|Hs108|chr16 (825 aa)
initn: 5819 init1: 5819 opt: 5819 Z-score: 3844.0 bits: 722.2 E(32554): 8.6e-208
Smith-Waterman score: 5819; 99.9% identity (99.9% similar) in 825 aa overlap (1-825:1-825)
10 20 30 40 50 60
pF1KE1 MGWLCSGLLFPVSCLVLLQVASSGNMKVLQEPTCVSDYMSISTCEWKMNGPTNCSTELRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MGWLCSGLLFPVSCLVLLQVASSGNMKVLQEPTCVSDYMSISTCEWKMNGPTNCSTELRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLWAGQQLLWKGSFKPSEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLWAGQQLLWKGSFKPSEH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 VKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 VKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EPSLRIAASTLKSGISYRARVRAWAQCYNTTWSEWSPSTKWHNSYREPFEQHLLLGVSVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EPSLRIAASTLKSGISYRARVRAWAQCYNTTWSEWSPSTKWHNSYREPFEQHLLLGVSVS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 CIVILAVCLLCYVSITKIKKEWWDQIPNPARSRLVAIIIQDAQGSQWEKRSRGQEPAKCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 CIVILAVCLLCYVSITKIKKEWWDQIPNPARSRLVAIIIQDAQGSQWEKRSRGQEPAKCP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 HWKNCLTKLLPCFLEHNMKRDEDPHKAAKEMPFQGSGKSAWCPVEISKTVLWPESISVVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 HWKNCLTKLLPCFLEHNMKRDEDPHKAAKEMPFQGSGKSAWCPVEISKTVLWPESISVVR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 CVELFEAPVECEEEEEVEEEKGSFCASPESSRDDFQEGRGGIVARLTESLFLDLLGEENG
::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::
CCDS10 CVELFEAPVECEEEEEVEEEKGSFCASPESSRDDFQEGREGIVARLTESLFLDLLGEENG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 GFCQQDMGESCLLPPSGSTSAHMPWDEFPSAGPKEAPPWGKEQPLHLEPSPPASPTQSPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GFCQQDMGESCLLPPSGSTSAHMPWDEFPSAGPKEAPPWGKEQPLHLEPSPPASPTQSPD
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 NLTCTETPLVIAGNPAYRSFSNSLSQSPCPRELGPDPLLARHLEEVEPEMPCVPQLSEPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 NLTCTETPLVIAGNPAYRSFSNSLSQSPCPRELGPDPLLARHLEEVEPEMPCVPQLSEPT
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE1 TVPQPEPETWEQILRRNVLQHGAAAAPVSAPTSGYQEFVHAVEQGGTQASAVVGLGPPGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TVPQPEPETWEQILRRNVLQHGAAAAPVSAPTSGYQEFVHAVEQGGTQASAVVGLGPPGE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE1 AGYKAFSSLLASSAVSPEKCGFGASSGEEGYKPFQDLIPGCPGDPAPVPVPLFTFGLDRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AGYKAFSSLLASSAVSPEKCGFGASSGEEGYKPFQDLIPGCPGDPAPVPVPLFTFGLDRE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE1 PPRSPQSSHLPSSSPEHLGLEPGEKVEDMPKPPLPQEQATDPLVDSLGSGIVYSALTCHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PPRSPQSSHLPSSSPEHLGLEPGEKVEDMPKPPLPQEQATDPLVDSLGSGIVYSALTCHL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE1 CGHLKQCHGQEDGGQTPVMASPCCGCCCGDRSSPPTTPLRAPDPSPGGVPLEASLCPASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 CGHLKQCHGQEDGGQTPVMASPCCGCCCGDRSSPPTTPLRAPDPSPGGVPLEASLCPASL
730 740 750 760 770 780
790 800 810 820
pF1KE1 APSGISEKSKSSSSFHPAPGNAQSSSQTPKIVNFVSVGPTYMRVS
:::::::::::::::::::::::::::::::::::::::::::::
CCDS10 APSGISEKSKSSSSFHPAPGNAQSSSQTPKIVNFVSVGPTYMRVS
790 800 810 820
>>CCDS58441.1 IL4R gene_id:3566|Hs108|chr16 (810 aa)
initn: 5660 init1: 5660 opt: 5660 Z-score: 3739.4 bits: 702.9 E(32554): 5.7e-202
Smith-Waterman score: 5660; 99.9% identity (99.9% similar) in 802 aa overlap (24-825:9-810)
10 20 30 40 50 60
pF1KE1 MGWLCSGLLFPVSCLVLLQVASSGNMKVLQEPTCVSDYMSISTCEWKMNGPTNCSTELRL
:::::::::::::::::::::::::::::::::::::
CCDS58 MQKDARREGNMKVLQEPTCVSDYMSISTCEWKMNGPTNCSTELRL
10 20 30 40
70 80 90 100 110 120
pF1KE1 LYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLWAGQQLLWKGSFKPSEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLWAGQQLLWKGSFKPSEH
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE1 VKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYL
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE1 EPSLRIAASTLKSGISYRARVRAWAQCYNTTWSEWSPSTKWHNSYREPFEQHLLLGVSVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EPSLRIAASTLKSGISYRARVRAWAQCYNTTWSEWSPSTKWHNSYREPFEQHLLLGVSVS
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE1 CIVILAVCLLCYVSITKIKKEWWDQIPNPARSRLVAIIIQDAQGSQWEKRSRGQEPAKCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 CIVILAVCLLCYVSITKIKKEWWDQIPNPARSRLVAIIIQDAQGSQWEKRSRGQEPAKCP
230 240 250 260 270 280
310 320 330 340 350 360
pF1KE1 HWKNCLTKLLPCFLEHNMKRDEDPHKAAKEMPFQGSGKSAWCPVEISKTVLWPESISVVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 HWKNCLTKLLPCFLEHNMKRDEDPHKAAKEMPFQGSGKSAWCPVEISKTVLWPESISVVR
290 300 310 320 330 340
370 380 390 400 410 420
pF1KE1 CVELFEAPVECEEEEEVEEEKGSFCASPESSRDDFQEGRGGIVARLTESLFLDLLGEENG
::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::
CCDS58 CVELFEAPVECEEEEEVEEEKGSFCASPESSRDDFQEGREGIVARLTESLFLDLLGEENG
350 360 370 380 390 400
430 440 450 460 470 480
pF1KE1 GFCQQDMGESCLLPPSGSTSAHMPWDEFPSAGPKEAPPWGKEQPLHLEPSPPASPTQSPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GFCQQDMGESCLLPPSGSTSAHMPWDEFPSAGPKEAPPWGKEQPLHLEPSPPASPTQSPD
410 420 430 440 450 460
490 500 510 520 530 540
pF1KE1 NLTCTETPLVIAGNPAYRSFSNSLSQSPCPRELGPDPLLARHLEEVEPEMPCVPQLSEPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NLTCTETPLVIAGNPAYRSFSNSLSQSPCPRELGPDPLLARHLEEVEPEMPCVPQLSEPT
470 480 490 500 510 520
550 560 570 580 590 600
pF1KE1 TVPQPEPETWEQILRRNVLQHGAAAAPVSAPTSGYQEFVHAVEQGGTQASAVVGLGPPGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TVPQPEPETWEQILRRNVLQHGAAAAPVSAPTSGYQEFVHAVEQGGTQASAVVGLGPPGE
530 540 550 560 570 580
610 620 630 640 650 660
pF1KE1 AGYKAFSSLLASSAVSPEKCGFGASSGEEGYKPFQDLIPGCPGDPAPVPVPLFTFGLDRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AGYKAFSSLLASSAVSPEKCGFGASSGEEGYKPFQDLIPGCPGDPAPVPVPLFTFGLDRE
590 600 610 620 630 640
670 680 690 700 710 720
pF1KE1 PPRSPQSSHLPSSSPEHLGLEPGEKVEDMPKPPLPQEQATDPLVDSLGSGIVYSALTCHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PPRSPQSSHLPSSSPEHLGLEPGEKVEDMPKPPLPQEQATDPLVDSLGSGIVYSALTCHL
650 660 670 680 690 700
730 740 750 760 770 780
pF1KE1 CGHLKQCHGQEDGGQTPVMASPCCGCCCGDRSSPPTTPLRAPDPSPGGVPLEASLCPASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 CGHLKQCHGQEDGGQTPVMASPCCGCCCGDRSSPPTTPLRAPDPSPGGVPLEASLCPASL
710 720 730 740 750 760
790 800 810 820
pF1KE1 APSGISEKSKSSSSFHPAPGNAQSSSQTPKIVNFVSVGPTYMRVS
:::::::::::::::::::::::::::::::::::::::::::::
CCDS58 APSGISEKSKSSSSFHPAPGNAQSSSQTPKIVNFVSVGPTYMRVS
770 780 790 800 810
825 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 14:06:24 2016 done: Sun Nov 6 14:06:25 2016
Total Scan time: 4.320 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]