Result of FASTA (omim) for
pFN21AE1881
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1881, 406 aa
1>>>pF1KE1881 406 - 406 aa - 406 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9392+/-0.000351; mu= 19.3872+/- 0.022
mean_var=67.5829+/-13.439, 0's: 0 Z-trim(114.7): 17 B-trim: 97 in 1/52
Lambda= 0.156011
statistics sampled from 24620 (24636) to 24620 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.289), width: 16
Scan time: 8.680
The best scores are: opt bits E(85289)
NP_001704 (OMIM: 602888) betaine--homocysteine S-m ( 406) 2754 628.8 7.4e-180
NP_060084 (OMIM: 605932) S-methylmethionine--homoc ( 363) 1545 356.6 5.6e-98
NP_001171476 (OMIM: 605932) S-methylmethionine--ho ( 299) 1292 299.6 6.7e-81
NP_001278868 (OMIM: 156570,250940,601634) methioni (1214) 198 53.8 2.6e-06
XP_005273198 (OMIM: 156570,250940,601634) PREDICTE (1264) 198 53.9 2.7e-06
NP_000245 (OMIM: 156570,250940,601634) methionine (1265) 198 53.9 2.7e-06
XP_016856819 (OMIM: 156570,250940,601634) PREDICTE (1258) 165 46.4 0.00046
XP_016856818 (OMIM: 156570,250940,601634) PREDICTE (1270) 165 46.4 0.00046
XP_011542496 (OMIM: 156570,250940,601634) PREDICTE (1321) 165 46.4 0.00048
>>NP_001704 (OMIM: 602888) betaine--homocysteine S-methy (406 aa)
initn: 2754 init1: 2754 opt: 2754 Z-score: 3350.0 bits: 628.8 E(85289): 7.4e-180
Smith-Waterman score: 2754; 100.0% identity (100.0% similar) in 406 aa overlap (1-406:1-406)
10 20 30 40 50 60
pF1KE1 MPPVGGKKAKKGILERLNAGEIVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPPVGGKKAKKGILERLNAGEIVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 REFLRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQEVNEAACDIARQVADEGDALVAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REFLRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQEVNEAACDIARQVADEGDALVAG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 GVSQTPSYLSCKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIASGKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVSQTPSYLSCKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIASGKP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 VAATMCIGPEGDLHGVPPGECAVRLVKAGASIIGVNCHFDPTISLKTVKLMKEGLEAARL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VAATMCIGPEGDLHGVPPGECAVRLVKAGASIIGVNCHFDPTISLKTVKLMKEGLEAARL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 KAHLMSQPLAYHTPDCNKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGGCC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAHLMSQPLAYHTPDCNKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGGCC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 GFEPYHIRAIAEELAPERGFLPPASEKHGSWGSGLDMHTKPWVRARARKEYWENLRIASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFEPYHIRAIAEELAPERGFLPPASEKHGSWGSGLDMHTKPWVRARARKEYWENLRIASG
310 320 330 340 350 360
370 380 390 400
pF1KE1 RPYNPSMSKPDGWGVTKGTAELMQQKEATTEQQLKELFEKQKFKSQ
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPYNPSMSKPDGWGVTKGTAELMQQKEATTEQQLKELFEKQKFKSQ
370 380 390 400
>>NP_060084 (OMIM: 605932) S-methylmethionine--homocyste (363 aa)
initn: 1947 init1: 1545 opt: 1545 Z-score: 1880.0 bits: 356.6 E(85289): 5.6e-98
Smith-Waterman score: 1948; 76.0% identity (88.4% similar) in 371 aa overlap (1-371:1-362)
10 20 30 40 50 60
pF1KE1 MPPVGGKKAKKGILERLNAGEIVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLH
: :.: :::::::::..::.:::::.:...:::::::::: :::::..:::.::::::
NP_060 MAPAGRPGAKKGILERLESGEVVIGDGSFLITLEKRGYVKAGLWTPEAVIEHPDAVRQLH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 REFLRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQEVNEAACDIARQVADEGDALVAG
::::::::::::::: ::::..:.. ..:: ::::.::.:: .:::::::
NP_060 MEFLRAGSNVMQTFTFSASEDNMESKW---------EDVNAAACDLAREVAGKGDALVAG
70 80 90 100 110
130 140 150 160 170 180
pF1KE1 GVSQTPSYLSCKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIASGKP
:. :: : :.:...::.: :::::: ::::::::::::::::::::::.: : .:
NP_060 GICQTSIYKYQKDEARIKKLFRQQLEVFAWKNVDFLIAEYFEHVEEAVWAVEVLKESDRP
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 VAATMCIGPEGDLHGVPPGECAVRLVKAGASIIGVNCHFDPTISLKTVKLMKEGLEAARL
::.:::::::::.: . :::::::::::::::.::::.: : ::::..::::::: : :
NP_060 VAVTMCIGPEGDMHDITPGECAVRLVKAGASIVGVNCRFGPDTSLKTMELMKEGLEWAGL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE1 KAHLMSQPLAYHTPDCNKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGGCC
::::: :::..:.:::.:.::.::::.::::: :::::::::::::::::::::::::::
NP_060 KAHLMVQPLGFHAPDCGKEGFVDLPEYPFGLESRVATRWDIQKYAREAYNLGVRYIGGCC
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE1 GFEPYHIRAIAEELAPERGFLPPASEKHGSWGSGLDMHTKPWVRARARKEYWENLRIASG
::::::::::::::::::::::::::::::::::::::::::.:::::.:::::: :::
NP_060 GFEPYHIRAIAEELAPERGFLPPASEKHGSWGSGLDMHTKPWIRARARREYWENLLPASG
300 310 320 330 340 350
370 380 390 400
pF1KE1 RPYNPSMSKPDGWGVTKGTAELMQQKEATTEQQLKELFEKQKFKSQ
::. ::.::::
NP_060 RPFCPSLSKPDF
360
>>NP_001171476 (OMIM: 605932) S-methylmethionine--homocy (299 aa)
initn: 1289 init1: 1289 opt: 1292 Z-score: 1573.5 bits: 299.6 E(85289): 6.7e-81
Smith-Waterman score: 1565; 65.0% identity (74.4% similar) in 371 aa overlap (1-371:1-298)
10 20 30 40 50 60
pF1KE1 MPPVGGKKAKKGILERLNAGEIVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLH
: :.: :::::::::..::.:::::.:...:::::::::: :::::..:::.::::::
NP_001 MAPAGRPGAKKGILERLESGEVVIGDGSFLITLEKRGYVKAGLWTPEAVIEHPDAVRQLH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 REFLRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQEVNEAACDIARQVADEGDALVAG
::::::::::::::: ::::..:..
NP_001 MEFLRAGSNVMQTFTFSASEDNMESK----------------------------------
70 80
130 140 150 160 170 180
pF1KE1 GVSQTPSYLSCKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIASGKP
:::::::::::::.: : .:
NP_001 ---------------------------------------YFEHVEEAVWAVEVLKESDRP
90 100
190 200 210 220 230 240
pF1KE1 VAATMCIGPEGDLHGVPPGECAVRLVKAGASIIGVNCHFDPTISLKTVKLMKEGLEAARL
::.:::::::::.: . :::::::::::::::.::::.: : ::::..::::::: : :
NP_001 VAVTMCIGPEGDMHDITPGECAVRLVKAGASIVGVNCRFGPDTSLKTMELMKEGLEWAGL
110 120 130 140 150 160
250 260 270 280 290 300
pF1KE1 KAHLMSQPLAYHTPDCNKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGGCC
::::: :::..:.:::.:.::.::::.::::: :::::::::::::::::::::::::::
NP_001 KAHLMVQPLGFHAPDCGKEGFVDLPEYPFGLESRVATRWDIQKYAREAYNLGVRYIGGCC
170 180 190 200 210 220
310 320 330 340 350 360
pF1KE1 GFEPYHIRAIAEELAPERGFLPPASEKHGSWGSGLDMHTKPWVRARARKEYWENLRIASG
::::::::::::::::::::::::::::::::::::::::::.:::::.:::::: :::
NP_001 GFEPYHIRAIAEELAPERGFLPPASEKHGSWGSGLDMHTKPWIRARARREYWENLLPASG
230 240 250 260 270 280
370 380 390 400
pF1KE1 RPYNPSMSKPDGWGVTKGTAELMQQKEATTEQQLKELFEKQKFKSQ
::. ::.::::
NP_001 RPFCPSLSKPDF
290
>>NP_001278868 (OMIM: 156570,250940,601634) methionine s (1214 aa)
initn: 110 init1: 110 opt: 198 Z-score: 234.3 bits: 53.8 E(85289): 2.6e-06
Smith-Waterman score: 223; 23.5% identity (51.3% similar) in 374 aa overlap (3-336:11-361)
10 20 30 40
pF1KE1 MPPVGGKKAKKGILERLNAGEIVIGDGGFVFALEK--------RGYV---KA
: : ::. . .. . .:.. :::. ... :: .:
NP_001 MSPALQDLSQPEGLKKTLRDEINAILQKRIMVLDGGMGTMIQREKLNEEHFRGQEFKDHA
10 20 30 40 50 60
50 60 70 80 90
pF1KE1 GPWTPEA---AVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQE
: . .. .:... :.:.:.: ::.....: :: .. ...: ::... .
NP_001 RPLKGNNDILSITQPDVIYQIHKEYLLAGADIIETNTFSSTSIA---QADYGLEHLA-YR
70 80 90 100 110
100 110 120 130 140
pF1KE1 VNEAACDIARQVADE-----G-DALVAGGVSQTPSYLSCKSETE-----------VKKVF
.: . .::..:.: : .:::... : . :: . .: . ...
NP_001 MNMCSAGVARKAAEEVTLQTGIKRFVAGALGPTNKTLSVSPSVERPDYRNITFDELVEAY
120 130 140 150 160 170
150 160 170 180 190
pF1KE1 LQQLEVFMKKNVDFLIAE-YFE--HVEEAVWAVETLIA---SGKPVAATMCI-GPEGDLH
.: . .. .::.:. : :. ... :..:...:. . .:. . : :
NP_001 QEQAKGLLDGGVDILLIETIFDTANAKAALFALQNLFEEKYAPRPIFISGTIVDKSGRTL
180 190 200 210 220 230
200 210 220 230 240 250
pF1KE1 GVPPGECAVRLVKAGASI-IGVNCHFDPTISLKTVKLMKEGLEAARLKAHLMSQPLAYHT
. :: : :. : . ::.:: . . .... . :... : :
NP_001 SGQTGEGFVISVSHGEPLCIGLNCALGAAEMRPFIEIIGKCTT-----AYVLCYPNA-GL
240 250 260 270 280 290
260 270 280 290 300 310
pF1KE1 PDCNKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGGCCGFEPYHIRAIAEE
:. : : : : . . .. .: .. : .::::: : ::: :::
NP_001 PNT----FGDYDETPSMMAKH------LKDFAMDGL---VNIVGGCCGSTPDHIREIAEA
300 310 320 330
320 330 340 350 360 370
pF1KE1 LAPERGFLPPASEKHGSWG-SGLDMHTKPWVRARARKEYWENLRIASGRPYNPSMSKPDG
. . .:::. .: :::.
NP_001 VKNCKPRVPPATAFEGHMLLSGLEPFRIGPYTNFVNIGERCNVAGSRKFAKLIMAGNYEE
340 350 360 370 380 390
>>XP_005273198 (OMIM: 156570,250940,601634) PREDICTED: m (1264 aa)
initn: 110 init1: 110 opt: 198 Z-score: 234.0 bits: 53.9 E(85289): 2.7e-06
Smith-Waterman score: 221; 24.2% identity (52.9% similar) in 314 aa overlap (49-336:70-360)
20 30 40 50 60 70
pF1KE1 AGEIVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYA
.. .:... :.:.:.: ::.....: :: .
XP_005 IQREKLNEEHFRGQEFKDHARPLKGNNDILSITQPDVIYQIHKEYLLAGADIIETNTFSS
40 50 60 70 80 90
80 90 100 110 120 130
pF1KE1 SEDKLENRGNYVLEKISGQEVNEAACDIARQVADE-----G-DALVAGGVSQTPSYLSCK
. ...: ::... ..: . .::..:.: : .:::... : . :: .
XP_005 TSI---AQADYGLEHLA-YRMNMCSAGVARKAAEEVTLQTGIKRFVAGALGPTNKTLSVS
100 110 120 130 140 150
140 150 160 170
pF1KE1 SETE-----------VKKVFLQQLEVFMKKNVDFLIAE-YFE--HVEEAVWAVETLIA--
.: . ... .: . .. .::.:. : :. ... :..:...:.
XP_005 PSVERPDYRNITFDELVEAYQEQAKGLLDGGVDILLIETIFDTANAKAALFALQNLFEEK
160 170 180 190 200 210
180 190 200 210 220 230
pF1KE1 -SGKPVAATMCI-GPEGDLHGVPPGECAVRLVKAGASI-IGVNCHFDPTISLKTVKLMKE
. .:. . : : . :: : :. : . ::.:: . . .... .
XP_005 YAPRPIFISGTIVDKSGRTLSGQTGEGFVISVSHGEPLCIGLNCALGAAEMRPFIEIIGK
220 230 240 250 260 270
240 250 260 270 280 290
pF1KE1 GLEAARLKAHLMSQPLAYHTPDCNKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGV
: ... : : :. : : : : . . .. .: .. :
XP_005 CTTA-----YVLCYPNA-GLPNT----FGDYDETPSMMAKH------LKDFAMDGL---V
280 290 300 310
300 310 320 330 340 350
pF1KE1 RYIGGCCGFEPYHIRAIAEELAPERGFLPPASEKHGSWG-SGLDMHTKPWVRARARKEYW
.::::: : ::: ::: . . .:::. .: :::.
XP_005 NIVGGCCGSTPDHIREIAEAVKNCKPRVPPATAFEGHMLLSGLEPFRIGPYTNFVNIGER
320 330 340 350 360 370
360 370 380 390 400
pF1KE1 ENLRIASGRPYNPSMSKPDGWGVTKGTAELMQQKEATTEQQLKELFEKQKFKSQ
XP_005 CNVAGSRKFAKLIMAGNYEEALCVAKVQVEMGAQVLDVNMDDGMLDGPSAMTRFCNLIAS
380 390 400 410 420 430
>>NP_000245 (OMIM: 156570,250940,601634) methionine synt (1265 aa)
initn: 110 init1: 110 opt: 198 Z-score: 234.0 bits: 53.9 E(85289): 2.7e-06
Smith-Waterman score: 223; 23.5% identity (51.3% similar) in 374 aa overlap (3-336:11-361)
10 20 30 40
pF1KE1 MPPVGGKKAKKGILERLNAGEIVIGDGGFVFALEK--------RGYV---KA
: : ::. . .. . .:.. :::. ... :: .:
NP_000 MSPALQDLSQPEGLKKTLRDEINAILQKRIMVLDGGMGTMIQREKLNEEHFRGQEFKDHA
10 20 30 40 50 60
50 60 70 80 90
pF1KE1 GPWTPEA---AVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQE
: . .. .:... :.:.:.: ::.....: :: .. ...: ::... .
NP_000 RPLKGNNDILSITQPDVIYQIHKEYLLAGADIIETNTFSSTSIA---QADYGLEHLA-YR
70 80 90 100 110
100 110 120 130 140
pF1KE1 VNEAACDIARQVADE-----G-DALVAGGVSQTPSYLSCKSETE-----------VKKVF
.: . .::..:.: : .:::... : . :: . .: . ...
NP_000 MNMCSAGVARKAAEEVTLQTGIKRFVAGALGPTNKTLSVSPSVERPDYRNITFDELVEAY
120 130 140 150 160 170
150 160 170 180 190
pF1KE1 LQQLEVFMKKNVDFLIAE-YFE--HVEEAVWAVETLIA---SGKPVAATMCI-GPEGDLH
.: . .. .::.:. : :. ... :..:...:. . .:. . : :
NP_000 QEQAKGLLDGGVDILLIETIFDTANAKAALFALQNLFEEKYAPRPIFISGTIVDKSGRTL
180 190 200 210 220 230
200 210 220 230 240 250
pF1KE1 GVPPGECAVRLVKAGASI-IGVNCHFDPTISLKTVKLMKEGLEAARLKAHLMSQPLAYHT
. :: : :. : . ::.:: . . .... . :... : :
NP_000 SGQTGEGFVISVSHGEPLCIGLNCALGAAEMRPFIEIIGKCTT-----AYVLCYPNA-GL
240 250 260 270 280 290
260 270 280 290 300 310
pF1KE1 PDCNKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGGCCGFEPYHIRAIAEE
:. : : : : . . .. .: .. : .::::: : ::: :::
NP_000 PNT----FGDYDETPSMMAKH------LKDFAMDGL---VNIVGGCCGSTPDHIREIAEA
300 310 320 330
320 330 340 350 360 370
pF1KE1 LAPERGFLPPASEKHGSWG-SGLDMHTKPWVRARARKEYWENLRIASGRPYNPSMSKPDG
. . .:::. .: :::.
NP_000 VKNCKPRVPPATAFEGHMLLSGLEPFRIGPYTNFVNIGERCNVAGSRKFAKLIMAGNYEE
340 350 360 370 380 390
>>XP_016856819 (OMIM: 156570,250940,601634) PREDICTED: m (1258 aa)
initn: 156 init1: 110 opt: 165 Z-score: 193.9 bits: 46.4 E(85289): 0.00046
Smith-Waterman score: 188; 24.1% identity (51.4% similar) in 311 aa overlap (52-336:130-417)
30 40 50 60 70 80
pF1KE1 IVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASED
::.. . :.: ::.....: :: ..
XP_016 WLAWPLAVVTCGEHVFSAAPSAQGGDSTTCHPRSKTCRNPEYLLAGADIIETNTFSSTSI
100 110 120 130 140 150
90 100 110 120 130
pF1KE1 KLENRGNYVLEKISGQEVNEAACDIARQVADE-----G-DALVAGGVSQTPSYLSCKSET
...: ::... ..: . .::..:.: : .:::... : . :: . .
XP_016 A---QADYGLEHLA-YRMNMCSAGVARKAAEEVTLQTGIKRFVAGALGPTNKTLSVSPSV
160 170 180 190 200 210
140 150 160 170
pF1KE1 E-----------VKKVFLQQLEVFMKKNVDFLIAE-YFE--HVEEAVWAVETLIA---SG
: . ... .: . .. .::.:. : :. ... :..:...:. .
XP_016 ERPDYRNITFDELVEAYQEQAKGLLDGGVDILLIETIFDTANAKAALFALQNLFEEKYAP
220 230 240 250 260 270
180 190 200 210 220 230
pF1KE1 KPVAATMCI-GPEGDLHGVPPGECAVRLVKAGASI-IGVNCHFDPTISLKTVKLMKEGLE
.:. . : : . :: : :. : . ::.:: . . .... .
XP_016 RPIFISGTIVDKSGRTLSGQTGEGFVISVSHGEPLCIGLNCALGAAEMRPFIEIIGKCTT
280 290 300 310 320 330
240 250 260 270 280 290
pF1KE1 AARLKAHLMSQPLAYHTPDCNKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYI
: ... : : :. : : : : . . .. .: .. : .
XP_016 A-----YVLCYPNA-GLPNT----FGDYDETPSMMAKH------LKDFAMDGL---VNIV
340 350 360 370
300 310 320 330 340 350
pF1KE1 GGCCGFEPYHIRAIAEELAPERGFLPPASEKHGSWG-SGLDMHTKPWVRARARKEYWENL
::::: : ::: ::: . . .:::. .: :::.
XP_016 GGCCGSTPDHIREIAEAVKNCKPRVPPATAFEGHMLLSGLEPFRIGPYTNFVNIGERCNV
380 390 400 410 420 430
360 370 380 390 400
pF1KE1 RIASGRPYNPSMSKPDGWGVTKGTAELMQQKEATTEQQLKELFEKQKFKSQ
XP_016 AGSRKFAKLIMAGNYEEALCVAKVQVEMGAQVLDVNMDDGMLDGPSAMTRFCNLIASEPD
440 450 460 470 480 490
>>XP_016856818 (OMIM: 156570,250940,601634) PREDICTED: m (1270 aa)
initn: 156 init1: 110 opt: 165 Z-score: 193.9 bits: 46.4 E(85289): 0.00046
Smith-Waterman score: 188; 24.1% identity (51.4% similar) in 311 aa overlap (52-336:130-417)
30 40 50 60 70 80
pF1KE1 IVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASED
::.. . :.: ::.....: :: ..
XP_016 WLAWPLAVVTCGEHVFSAAPSAQGGDSTTCHPRSKTCRNPEYLLAGADIIETNTFSSTSI
100 110 120 130 140 150
90 100 110 120 130
pF1KE1 KLENRGNYVLEKISGQEVNEAACDIARQVADE-----G-DALVAGGVSQTPSYLSCKSET
...: ::... ..: . .::..:.: : .:::... : . :: . .
XP_016 A---QADYGLEHLA-YRMNMCSAGVARKAAEEVTLQTGIKRFVAGALGPTNKTLSVSPSV
160 170 180 190 200 210
140 150 160 170
pF1KE1 E-----------VKKVFLQQLEVFMKKNVDFLIAE-YFE--HVEEAVWAVETLIA---SG
: . ... .: . .. .::.:. : :. ... :..:...:. .
XP_016 ERPDYRNITFDELVEAYQEQAKGLLDGGVDILLIETIFDTANAKAALFALQNLFEEKYAP
220 230 240 250 260 270
180 190 200 210 220 230
pF1KE1 KPVAATMCI-GPEGDLHGVPPGECAVRLVKAGASI-IGVNCHFDPTISLKTVKLMKEGLE
.:. . : : . :: : :. : . ::.:: . . .... .
XP_016 RPIFISGTIVDKSGRTLSGQTGEGFVISVSHGEPLCIGLNCALGAAEMRPFIEIIGKCTT
280 290 300 310 320 330
240 250 260 270 280 290
pF1KE1 AARLKAHLMSQPLAYHTPDCNKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYI
: ... : : :. : : : : . . .. .: .. : .
XP_016 A-----YVLCYPNA-GLPNT----FGDYDETPSMMAKH------LKDFAMDGL---VNIV
340 350 360 370
300 310 320 330 340 350
pF1KE1 GGCCGFEPYHIRAIAEELAPERGFLPPASEKHGSWG-SGLDMHTKPWVRARARKEYWENL
::::: : ::: ::: . . .:::. .: :::.
XP_016 GGCCGSTPDHIREIAEAVKNCKPRVPPATAFEGHMLLSGLEPFRIGPYTNFVNIGERCNV
380 390 400 410 420 430
360 370 380 390 400
pF1KE1 RIASGRPYNPSMSKPDGWGVTKGTAELMQQKEATTEQQLKELFEKQKFKSQ
XP_016 AGSRKFAKLIMAGNYEEALCVAKVQVEMGAQVLDVNMDDGMLDGPSAMTRFCNLIASEPD
440 450 460 470 480 490
>>XP_011542496 (OMIM: 156570,250940,601634) PREDICTED: m (1321 aa)
initn: 156 init1: 110 opt: 165 Z-score: 193.6 bits: 46.4 E(85289): 0.00048
Smith-Waterman score: 188; 24.1% identity (51.4% similar) in 311 aa overlap (52-336:130-417)
30 40 50 60 70 80
pF1KE1 IVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASED
::.. . :.: ::.....: :: ..
XP_011 WLAWPLAVVTCGEHVFSAAPSAQGGDSTTCHPRSKTCRNPEYLLAGADIIETNTFSSTSI
100 110 120 130 140 150
90 100 110 120 130
pF1KE1 KLENRGNYVLEKISGQEVNEAACDIARQVADE-----G-DALVAGGVSQTPSYLSCKSET
...: ::... ..: . .::..:.: : .:::... : . :: . .
XP_011 A---QADYGLEHLA-YRMNMCSAGVARKAAEEVTLQTGIKRFVAGALGPTNKTLSVSPSV
160 170 180 190 200 210
140 150 160 170
pF1KE1 E-----------VKKVFLQQLEVFMKKNVDFLIAE-YFE--HVEEAVWAVETLIA---SG
: . ... .: . .. .::.:. : :. ... :..:...:. .
XP_011 ERPDYRNITFDELVEAYQEQAKGLLDGGVDILLIETIFDTANAKAALFALQNLFEEKYAP
220 230 240 250 260 270
180 190 200 210 220 230
pF1KE1 KPVAATMCI-GPEGDLHGVPPGECAVRLVKAGASI-IGVNCHFDPTISLKTVKLMKEGLE
.:. . : : . :: : :. : . ::.:: . . .... .
XP_011 RPIFISGTIVDKSGRTLSGQTGEGFVISVSHGEPLCIGLNCALGAAEMRPFIEIIGKCTT
280 290 300 310 320 330
240 250 260 270 280 290
pF1KE1 AARLKAHLMSQPLAYHTPDCNKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYI
: ... : : :. : : : : . . .. .: .. : .
XP_011 A-----YVLCYPNA-GLPNT----FGDYDETPSMMAKH------LKDFAMDGL---VNIV
340 350 360 370
300 310 320 330 340 350
pF1KE1 GGCCGFEPYHIRAIAEELAPERGFLPPASEKHGSWG-SGLDMHTKPWVRARARKEYWENL
::::: : ::: ::: . . .:::. .: :::.
XP_011 GGCCGSTPDHIREIAEAVKNCKPRVPPATAFEGHMLLSGLEPFRIGPYTNFVNIGERCNV
380 390 400 410 420 430
360 370 380 390 400
pF1KE1 RIASGRPYNPSMSKPDGWGVTKGTAELMQQKEATTEQQLKELFEKQKFKSQ
XP_011 AGSRKFAKLIMAGNYEEALCVAKVQVEMGAQVLDVNMDDGMLDGPSAMTRFCNLIASEPD
440 450 460 470 480 490
406 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 17:13:08 2016 done: Sun Nov 6 17:13:09 2016
Total Scan time: 8.680 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]