Result of FASTA (ccds) for
pFN21AE1873
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1873, 394 aa
1>>>pF1KE1873 394 - 394 aa - 394 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1287+/-0.000847; mu= 14.5190+/- 0.052
mean_var=91.1560+/-18.048, 0's: 0 Z-trim(109.0): 22 B-trim: 550 in 1/50
Lambda= 0.134333
statistics sampled from 10602 (10621) to 10602 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.686), E-opt: 0.2 (0.326), width: 16
Scan time: 2.810
The best scores are: opt bits E(32554)
CCDS8521.2 PRMT8 gene_id:56341|Hs108|chr12 ( 394) 2667 526.6 1.5e-149
CCDS58200.1 PRMT8 gene_id:56341|Hs108|chr12 ( 385) 2512 496.6 1.6e-140
CCDS42592.1 PRMT1 gene_id:3276|Hs108|chr19 ( 353) 1974 392.3 3.6e-109
CCDS46145.1 PRMT1 gene_id:3276|Hs108|chr19 ( 371) 1968 391.2 8.4e-109
CCDS44554.1 PRMT3 gene_id:10196|Hs108|chr11 ( 469) 1053 213.9 2.5e-55
CCDS7853.1 PRMT3 gene_id:10196|Hs108|chr11 ( 531) 1053 213.9 2.7e-55
CCDS74425.1 PRMT1 gene_id:3276|Hs108|chr19 ( 285) 871 178.5 6.8e-45
CCDS12250.1 CARM1 gene_id:10498|Hs108|chr19 ( 608) 648 135.5 1.3e-31
CCDS13737.1 PRMT2 gene_id:3275|Hs108|chr21 ( 433) 619 129.8 4.8e-30
CCDS41360.2 PRMT6 gene_id:55170|Hs108|chr1 ( 375) 560 118.3 1.2e-26
CCDS68230.1 PRMT2 gene_id:3275|Hs108|chr21 ( 289) 534 113.2 3.1e-25
CCDS56219.1 PRMT2 gene_id:3275|Hs108|chr21 ( 284) 378 83.0 3.9e-16
CCDS68231.1 PRMT2 gene_id:3275|Hs108|chr21 ( 301) 378 83.0 4.1e-16
CCDS74806.1 PRMT2 gene_id:3275|Hs108|chr21 ( 228) 371 81.5 8.3e-16
CCDS56220.1 PRMT2 gene_id:3275|Hs108|chr21 ( 331) 371 81.6 1.1e-15
>>CCDS8521.2 PRMT8 gene_id:56341|Hs108|chr12 (394 aa)
initn: 2667 init1: 2667 opt: 2667 Z-score: 2798.5 bits: 526.6 E(32554): 1.5e-149
Smith-Waterman score: 2667; 100.0% identity (100.0% similar) in 394 aa overlap (1-394:1-394)
10 20 30 40 50 60
pF1KE1 MGMKHSSRCLLLRRKMAENAAESTEVNSPPSQPPQPVVPAKPVQCVHHVSTQPSCPGRGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS85 MGMKHSSRCLLLRRKMAENAAESTEVNSPPSQPPQPVVPAKPVQCVHHVSTQPSCPGRGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 MSKLLNPEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS85 MSKLLNPEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 GTGILSMFAAKAGAKKVFGIECSSISDYSEKIIKANHLDNIITIFKGKVEEVELPVEKVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS85 GTGILSMFAAKAGAKKVFGIECSSISDYSEKIIKANHLDNIITIFKGKVEEVELPVEKVD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 IIISEWMGYCLFYESMLNTVIFARDKWLKPGGLMFPDRAALYVVAIEDRQYKDFKIHWWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS85 IIISEWMGYCLFYESMLNTVIFARDKWLKPGGLMFPDRAALYVVAIEDRQYKDFKIHWWE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 NVYGFDMTCIRDVAMKEPLVDIVDPKQVVTNACLIKEVDIYTVKTEELSFTSAFCLQIQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS85 NVYGFDMTCIRDVAMKEPLVDIVDPKQVVTNACLIKEVDIYTVKTEELSFTSAFCLQIQR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 NDYVHALVTYFNIEFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYGTISM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS85 NDYVHALVTYFNIEFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYGTISM
310 320 330 340 350 360
370 380 390
pF1KE1 KPNAKNVRDLDFTVDLDFKGQLCETSVSNDYKMR
::::::::::::::::::::::::::::::::::
CCDS85 KPNAKNVRDLDFTVDLDFKGQLCETSVSNDYKMR
370 380 390
>>CCDS58200.1 PRMT8 gene_id:56341|Hs108|chr12 (385 aa)
initn: 2512 init1: 2512 opt: 2512 Z-score: 2636.3 bits: 496.6 E(32554): 1.6e-140
Smith-Waterman score: 2512; 99.2% identity (99.5% similar) in 373 aa overlap (22-394:13-385)
10 20 30 40 50 60
pF1KE1 MGMKHSSRCLLLRRKMAENAAESTEVNSPPSQPPQPVVPAKPVQCVHHVSTQPSCPGRGK
: . :::::::::::::::::::::::::::::::::::
CCDS58 MESLASDGFKLKEVSSVNSPPSQPPQPVVPAKPVQCVHHVSTQPSCPGRGK
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 MSKLLNPEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MSKLLNPEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGS
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 GTGILSMFAAKAGAKKVFGIECSSISDYSEKIIKANHLDNIITIFKGKVEEVELPVEKVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GTGILSMFAAKAGAKKVFGIECSSISDYSEKIIKANHLDNIITIFKGKVEEVELPVEKVD
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 IIISEWMGYCLFYESMLNTVIFARDKWLKPGGLMFPDRAALYVVAIEDRQYKDFKIHWWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 IIISEWMGYCLFYESMLNTVIFARDKWLKPGGLMFPDRAALYVVAIEDRQYKDFKIHWWE
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE1 NVYGFDMTCIRDVAMKEPLVDIVDPKQVVTNACLIKEVDIYTVKTEELSFTSAFCLQIQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NVYGFDMTCIRDVAMKEPLVDIVDPKQVVTNACLIKEVDIYTVKTEELSFTSAFCLQIQR
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE1 NDYVHALVTYFNIEFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYGTISM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NDYVHALVTYFNIEFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYGTISM
300 310 320 330 340 350
370 380 390
pF1KE1 KPNAKNVRDLDFTVDLDFKGQLCETSVSNDYKMR
::::::::::::::::::::::::::::::::::
CCDS58 KPNAKNVRDLDFTVDLDFKGQLCETSVSNDYKMR
360 370 380
>>CCDS42592.1 PRMT1 gene_id:3276|Hs108|chr19 (353 aa)
initn: 1953 init1: 1953 opt: 1974 Z-score: 2073.4 bits: 392.3 E(32554): 3.6e-109
Smith-Waterman score: 1974; 79.2% identity (94.1% similar) in 355 aa overlap (40-394:4-353)
10 20 30 40 50 60
pF1KE1 LLLRRKMAENAAESTEVNSPPSQPPQPVVPAKPVQCVHHVSTQPSCPGRGKMSKLLNPEE
:. ..:. .:: : :... :. : :.
CCDS42 MAAAEAANCIMEVS----C-GQAESSEKPNAED
10 20
70 80 90 100 110 120
pF1KE1 MTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGILSMFA
:::.::::::::::::::::::::::::::::::.::.:.:::::::::::::::: :::
CCDS42 MTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFA
30 40 50 60 70 80
130 140 150 160 170 180
pF1KE1 AKAGAKKVFGIECSSISDYSEKIIKANHLDNIITIFKGKVEEVELPVEKVDIIISEWMGY
:::::.::.::::::::::. ::.:::.::...::.::::::::::::::::::::::::
CCDS42 AKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGY
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE1 CLFYESMLNTVIFARDKWLKPGGLMFPDRAALYVVAIEDRQYKDFKIHWWENVYGFDMTC
:::::::::::..:::::: : ::.:::::.:::.:::::::::.:::::::::::::.:
CCDS42 CLFYESMLNTVLYARDKWLAPDGLIFPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSC
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE1 IRDVAMKEPLVDIVDPKQVVTNACLIKEVDIYTVKTEELSFTSAFCLQIQRNDYVHALVT
:.:::.::::::.:::::.::::::::::::::::.:.:.::: ::::..:::::::::.
CCDS42 IKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTVKVEDLTFTSPFCLQVKRNDYVHALVA
210 220 230 240 250 260
310 320 330 340 350 360
pF1KE1 YFNIEFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYGTISMKPNAKNVRD
:::::::.:::. ::::.:..:::::::::::.::::::. ::::.:::.:.::::: ::
CCDS42 YFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEDYLTVKTGEEIFGTIGMRPNAKNNRD
270 280 290 300 310 320
370 380 390
pF1KE1 LDFTVDLDFKGQLCETSVSNDYKMR
::::.:::::::::: : :.::.::
CCDS42 LDFTIDLDFKGQLCELSCSTDYRMR
330 340 350
>>CCDS46145.1 PRMT1 gene_id:3276|Hs108|chr19 (371 aa)
initn: 1953 init1: 1953 opt: 1968 Z-score: 2066.8 bits: 391.2 E(32554): 8.4e-109
Smith-Waterman score: 1968; 80.1% identity (94.0% similar) in 351 aa overlap (49-394:22-371)
20 30 40 50 60 70
pF1KE1 NAAESTEVNSPPSQPPQPVVPAKPVQCVHHVSTQP-----SCPGRGKMSKLLNPEEMTSR
.: :: :: :... :. : :.:::.
CCDS46 MAAAEAANCIMENFVATLANGMSLQPPLEEVSC-GQAESSEKPNAEDMTSK
10 20 30 40 50
80 90 100 110 120 130
pF1KE1 DYYFDSYAHFGIHEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGILSMFAAKAG
::::::::::::::::::::::::::::::.::.:.:::::::::::::::: :::::::
CCDS46 DYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAG
60 70 80 90 100 110
140 150 160 170 180 190
pF1KE1 AKKVFGIECSSISDYSEKIIKANHLDNIITIFKGKVEEVELPVEKVDIIISEWMGYCLFY
:.::.::::::::::. ::.:::.::...::.::::::::::::::::::::::::::::
CCDS46 ARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFY
120 130 140 150 160 170
200 210 220 230 240 250
pF1KE1 ESMLNTVIFARDKWLKPGGLMFPDRAALYVVAIEDRQYKDFKIHWWENVYGFDMTCIRDV
:::::::..:::::: : ::.:::::.:::.:::::::::.:::::::::::::.::.::
CCDS46 ESMLNTVLYARDKWLAPDGLIFPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKDV
180 190 200 210 220 230
260 270 280 290 300 310
pF1KE1 AMKEPLVDIVDPKQVVTNACLIKEVDIYTVKTEELSFTSAFCLQIQRNDYVHALVTYFNI
:.::::::.:::::.::::::::::::::::.:.:.::: ::::..:::::::::.::::
CCDS46 AIKEPLVDVVDPKQLVTNACLIKEVDIYTVKVEDLTFTSPFCLQVKRNDYVHALVAYFNI
240 250 260 270 280 290
320 330 340 350 360 370
pF1KE1 EFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYGTISMKPNAKNVRDLDFT
:::.:::. ::::.:..:::::::::::.::::::. ::::.:::.:.::::: ::::::
CCDS46 EFTRCHKRTGFSTSPESPYTHWKQTVFYMEDYLTVKTGEEIFGTIGMRPNAKNNRDLDFT
300 310 320 330 340 350
380 390
pF1KE1 VDLDFKGQLCETSVSNDYKMR
.:::::::::: : :.::.::
CCDS46 IDLDFKGQLCELSCSTDYRMR
360 370
>>CCDS44554.1 PRMT3 gene_id:10196|Hs108|chr11 (469 aa)
initn: 1050 init1: 880 opt: 1053 Z-score: 1106.9 bits: 213.9 E(32554): 2.5e-55
Smith-Waterman score: 1053; 49.5% identity (79.2% similar) in 307 aa overlap (76-381:158-464)
50 60 70 80 90 100
pF1KE1 VHHVSTQPSCPGRGKMSKLLNPEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMYH
::.::.:.:::::::::..:: .::. .:.
CCDS44 AQDFVMHTDVRTCSSSTSVIADLQEDEDGVYFSSYGHYGIHEEMLKDKIRTESYRDFIYQ
130 140 150 160 170 180
110 120 130 140 150 160
pF1KE1 NKHVFKDKVVLDVGSGTGILSMFAAKAGAKKVFGIECSSISDYSEKIIKANHLDNIITIF
: :.:::::::::: :::::::::::::::::.:.. : : . ::. :.:.. ::..
CCDS44 NPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLI
190 200 210 220 230 240
170 180 190 200 210 220
pF1KE1 KGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVIFARDKWLKPGGLMFPDRAALYVVA
:::.:::.:::::::.:::::::: :..::::..:..:..:.: :: ..:: .. .::
CCDS44 KGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPDICTISLVA
250 260 270 280 290 300
230 240 250 260 270 280
pF1KE1 IEDRQYKDFKIHWWENVYGFDMTCIRDVAMKEPLVDIVDPKQVVTNACLIKEVDIYTVKT
. : . . .: .:..:::: :.:.. ... : .:...::: .... : ::..: .:..
CCDS44 VSDVNKHADRIAFWDDVYGFKMSCMKKAVIPEAVVEVLDPKTLISEPCGIKHIDCHTTSI
310 320 330 340 350 360
290 300 310 320 330 340
pF1KE1 EELSFTSAFCLQIQRNDYVHALVTYFNIEFTK-CHKKMGFSTAPDAPYTHWKQTVFYLED
.: :.: : :.: :... :.. ::.: : : ::... :::.:.. :::::::: ::
CCDS44 SDLEFSSDFTLKITRTSMCTAIAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTVFLLEK
370 380 390 400 410 420
350 360 370 380 390
pF1KE1 YLTVRRGEEIYGTISMKPNAKNVRDLDFTVDLDFKGQLCETSVSNDYKMR
..:. :: . : .... : :. :.: :. :. . :
CCDS44 PFSVKAGEALKGKVTVHKNKKDPRSLTVTLTLNNSTQTYGLQ
430 440 450 460
>>CCDS7853.1 PRMT3 gene_id:10196|Hs108|chr11 (531 aa)
initn: 1050 init1: 880 opt: 1053 Z-score: 1106.1 bits: 213.9 E(32554): 2.7e-55
Smith-Waterman score: 1053; 49.5% identity (79.2% similar) in 307 aa overlap (76-381:220-526)
50 60 70 80 90 100
pF1KE1 VHHVSTQPSCPGRGKMSKLLNPEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMYH
::.::.:.:::::::::..:: .::. .:.
CCDS78 AQDFVMHTDVRTCSSSTSVIADLQEDEDGVYFSSYGHYGIHEEMLKDKIRTESYRDFIYQ
190 200 210 220 230 240
110 120 130 140 150 160
pF1KE1 NKHVFKDKVVLDVGSGTGILSMFAAKAGAKKVFGIECSSISDYSEKIIKANHLDNIITIF
: :.:::::::::: :::::::::::::::::.:.. : : . ::. :.:.. ::..
CCDS78 NPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLI
250 260 270 280 290 300
170 180 190 200 210 220
pF1KE1 KGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVIFARDKWLKPGGLMFPDRAALYVVA
:::.:::.:::::::.:::::::: :..::::..:..:..:.: :: ..:: .. .::
CCDS78 KGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPDICTISLVA
310 320 330 340 350 360
230 240 250 260 270 280
pF1KE1 IEDRQYKDFKIHWWENVYGFDMTCIRDVAMKEPLVDIVDPKQVVTNACLIKEVDIYTVKT
. : . . .: .:..:::: :.:.. ... : .:...::: .... : ::..: .:..
CCDS78 VSDVNKHADRIAFWDDVYGFKMSCMKKAVIPEAVVEVLDPKTLISEPCGIKHIDCHTTSI
370 380 390 400 410 420
290 300 310 320 330 340
pF1KE1 EELSFTSAFCLQIQRNDYVHALVTYFNIEFTK-CHKKMGFSTAPDAPYTHWKQTVFYLED
.: :.: : :.: :... :.. ::.: : : ::... :::.:.. :::::::: ::
CCDS78 SDLEFSSDFTLKITRTSMCTAIAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTVFLLEK
430 440 450 460 470 480
350 360 370 380 390
pF1KE1 YLTVRRGEEIYGTISMKPNAKNVRDLDFTVDLDFKGQLCETSVSNDYKMR
..:. :: . : .... : :. :.: :. :. . :
CCDS78 PFSVKAGEALKGKVTVHKNKKDPRSLTVTLTLNNSTQTYGLQ
490 500 510 520 530
>>CCDS74425.1 PRMT1 gene_id:3276|Hs108|chr19 (285 aa)
initn: 867 init1: 836 opt: 871 Z-score: 919.5 bits: 178.5 E(32554): 6.8e-45
Smith-Waterman score: 1402; 63.1% identity (75.5% similar) in 355 aa overlap (40-394:4-285)
10 20 30 40 50 60
pF1KE1 LLLRRKMAENAAESTEVNSPPSQPPQPVVPAKPVQCVHHVSTQPSCPGRGKMSKLLNPEE
:. ..:. .:: : :... :. : :.
CCDS74 MAAAEAANCIMEVS----C-GQAESSEKPNAED
10 20
70 80 90 100 110 120
pF1KE1 MTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGILSMFA
:::.::::::::::::::::::::::::::::::.::.:.:::::::::::::::: :::
CCDS74 MTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFA
30 40 50 60 70 80
130 140 150 160 170 180
pF1KE1 AKAGAKKVFGIECSSISDYSEKIIKANHLDNIITIFKGKVEEVELPVEKVDIIISEWMGY
:::::.::.::::::::::. ::.:::.::...::.::::::::::::::::::::::::
CCDS74 AKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGY
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE1 CLFYESMLNTVIFARDKWLKPGGLMFPDRAALYVVAIEDRQYKDFKIHWWENVYGFDMTC
:::::::::::..::::::
CCDS74 CLFYESMLNTVLYARDKWL-----------------------------------------
150 160
250 260 270 280 290 300
pF1KE1 IRDVAMKEPLVDIVDPKQVVTNACLIKEVDIYTVKTEELSFTSAFCLQIQRNDYVHALVT
::::::::.:.:.::: ::::..:::::::::.
CCDS74 ---------------------------EVDIYTVKVEDLTFTSPFCLQVKRNDYVHALVA
170 180 190 200
310 320 330 340 350 360
pF1KE1 YFNIEFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYGTISMKPNAKNVRD
:::::::.:::. ::::.:..:::::::::::.::::::. ::::.:::.:.::::: ::
CCDS74 YFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEDYLTVKTGEEIFGTIGMRPNAKNNRD
210 220 230 240 250 260
370 380 390
pF1KE1 LDFTVDLDFKGQLCETSVSNDYKMR
::::.:::::::::: : :.::.::
CCDS74 LDFTIDLDFKGQLCELSCSTDYRMR
270 280
>>CCDS12250.1 CARM1 gene_id:10498|Hs108|chr19 (608 aa)
initn: 570 init1: 328 opt: 648 Z-score: 681.1 bits: 135.5 E(32554): 1.3e-31
Smith-Waterman score: 648; 33.5% identity (65.9% similar) in 352 aa overlap (40-380:112-460)
10 20 30 40 50 60
pF1KE1 LLLRRKMAENAAESTEVNSPPSQPPQPVVPAKPVQCVHHVSTQPSCPGRGKMSKLLNPE-
: : . . .: :. .... .
CCDS12 CSVSRETECSRVGKQSFIITLGCNSVLIQFATPNDFCSFYNILKTCRGHTLERSVFSERT
90 100 110 120 130 140
70 80 90 100 110 120
pF1KE1 EMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGILSMF
: .: ::. :.... ...:..: ::: ::. .. .:. ::::.::::: :.::::.:
CCDS12 EESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFF
150 160 170 180 190 200
130 140 150 160 170 180
pF1KE1 AAKAGAKKVFGIECSSISDYSEKIIKANHLDNIITIFKGKVEEVELPVEKVDIIISEWMG
::.:::.:....: :......: ..:.:.: . :... :::::: :: :.::::::: ::
CCDS12 AAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMG
210 220 230 240 250 260
190 200 210 220 230 240
pF1KE1 YCLFYESMLNTVIFARDKWLKPGGLMFPDRAALYVVAIEDRQ--YKDF-KIHWW--ENVY
: :: : ::.. . :. :.:::.: ::: . .... . :.: ...: : ..: . .
CCDS12 YMLFNERMLESYLHAK-KYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFH
270 280 290 300 310
250 260 270 280 290
pF1KE1 GFDMTCIRDVAMKE----PLVDIVDPKQVVTNACLIKEVDIYTVKTEELS-FTSAFCLQI
: :.. .: .:. : :.:: : . .. . :.. .: .: . : ...
CCDS12 GVDLSALRGAAVDEYFRQPVVDTFDIR-ILMAKSVKYTVNFLEAKEGDLHRIEIPFKFHM
320 330 340 350 360 370
300 310 320 330 340 350
pF1KE1 QRNDYVHALVTYFNIEFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYGTI
.. ::.:. .:.. : . .:::: : ::: :. ... : .. :. . ::
CCDS12 LHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTC
380 390 400 410 420 430
360 370 380 390
pF1KE1 SMKPNAKNVRDLDFTVDLDFKGQLCETSVSNDYKMR
. : .. :.......: :
CCDS12 LLIANKRQSYDISIVAQVDQTGSKSSNLLDLKNPFFRYTGTTPSPPPGSHYTSPSENMWN
440 450 460 470 480 490
>>CCDS13737.1 PRMT2 gene_id:3275|Hs108|chr21 (433 aa)
initn: 526 init1: 417 opt: 619 Z-score: 652.9 bits: 129.8 E(32554): 4.8e-30
Smith-Waterman score: 720; 34.8% identity (71.2% similar) in 316 aa overlap (59-363:85-398)
30 40 50 60 70 80
pF1KE1 PPSQPPQPVVPAKPVQCVHHVSTQPSCPGRGKMSKLLNPEEMTSRDYYFDSYAHFGIHEE
:: .::. . . :: ::. . .: :
CCDS13 EKILILRQTTADWWWGERAGCCGYIPANHVGKHVDEYDPEDTWQDEEYFGSYGTLKLHLE
60 70 80 90 100 110
90 100 110 120 130 140
pF1KE1 MLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGILSMFAAK-AGAKKVFGIECSSISD
:: :. :: :.. . .::. . :::.:::: ::::.:.: :. : . :...: : ...
CCDS13 MLADQPRTTKYHSVILQNKESLTDKVILDVGCGTGIISLFCAHYARPRAVYAVEASEMAQ
120 130 140 150 160 170
150 160 170 180 190 200
pF1KE1 YSEKIIKANHLDNIITIFKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVIFARDKW
.. ... : . .:::... :::.: :: ::::...::::: ::..: :......::: :
CCDS13 HTGQLVLQNGFADIITVYQQKVEDVVLP-EKVDVLVSEWMGTCLLFEFMIESILYARDAW
180 190 200 210 220 230
210 220 230 240 250 260
pF1KE1 LKPGGLMFPDRAALYVVAIE-DRQYKDFKIHWWENVYGFDMTCIRDVAMKE----PLVD-
:: :...: :::..: :..:.. :. .:.:.: :... ....:.:: : .
CCDS13 LKEDGVIWPTMAALHLVPCSADKDYRS-KVLFWDNAYEFNLSALKSLAVKEFFSKPKYNH
240 250 260 270 280 290
270 280 290 300 310 320
pF1KE1 IVDPKQVVTNACLIKEVDIYTVKTEEL-SFTSAFCLQIQRNDYVHALVTYFNIEFTKCHK
:. :.. ... : : ..:. ::. .: .. . . ..:.. .:.....:...: . ..
CCDS13 ILKPEDCLSEPCTILQLDMRTVQISDLETLRGELRFDIRKAGTLHGFTAWFSVHFQSLQE
300 310 320 330 340 350
330 340 350 360 370
pF1KE1 KMG---FSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYGTISMKPNAKNVRDLDFTVDLD
. .::.: : ::::::.:...: . :. :. . :.. .. :
CCDS13 GQPPQVLSTGPFHPTTHWKQTLFMMDDPVPVHTGDVVTGSVVLQRNPVWRRHMSVALSWA
360 370 380 390 400 410
380 390
pF1KE1 FKGQLCETSVSNDYKMR
CCDS13 VTSRQDPTSQKVGEKVFPIWR
420 430
>>CCDS41360.2 PRMT6 gene_id:55170|Hs108|chr1 (375 aa)
initn: 650 init1: 299 opt: 560 Z-score: 592.0 bits: 118.3 E(32554): 1.2e-26
Smith-Waterman score: 668; 35.3% identity (67.1% similar) in 337 aa overlap (73-393:43-373)
50 60 70 80 90 100
pF1KE1 VQCVHHVSTQPSCPGRGKMSKLLNPEEMTSRDY-YFDSYAHFGIHEEMLKDEVRTLTYRN
:: :.. :. ..::::. :.::: .::
CCDS41 GGGEGGEGTEEEDGAEREAALERPRRTKRERDQLYYECYSDVSVHEEMIADRVRTDAYRL
20 30 40 50 60 70
110 120 130 140 150 160
pF1KE1 SMYHNKHVFKDKVVLDVGSGTGILSMFAAKAGAKKVFGIECSSISDYSEKIIKANHLDNI
.. .: ... :.:::::.::::::.: :.:::..:...: :.: . ...... : :..
CCDS41 GILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDR
80 90 100 110 120 130
170 180 190 200 210 220
pF1KE1 ITIFKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVIFARDKWLKPGGLMFPDRAAL
. .. : :: :::: :.:: :.:::::: :..::::..:. :: :::: :::..: : :
CCDS41 VHVLPGPVETVELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAEL
140 150 160 170 180 190
230 240 250 260 270
pF1KE1 YVVAIEDRQYKDFKIHWWENV---YGFDMTCIRDVAMK------EPLVDIVDPKQVVTNA
... : : :. .... .: .: :: ::.:.. : . : .:. .. ..:..
CCDS41 FIAPISD-QMLEWRLGFWSQVKQHYGVDMSCLEGFATRCLMGHSEIVVQGLSGEDVLARP
200 210 220 230 240 250
280 290 300 310 320
pF1KE1 CLIKEVDIYTVKTE---ELSFTSAFCLQIQRNDYVHALVTYFNIEFT--KCHKKMGFSTA
. .... . : : . . : . . .:... .:.. : . .: . .::.
CCDS41 QRFAQLELSRAGLEQELEAGVGGRFRCSCYGSAPMHGFAIWFQVTFPGGESEKPLVLSTS
260 270 280 290 300 310
330 340 350 360 370 380
pF1KE1 PDAPYTHWKQTVFYLEDYLTVRRGEEIYGTISMKPNAKNVRDLDFTVDLDFK-GQLCETS
: : :::::...::.. . :.. .. : :.. :. : : : : : .: :. :
CCDS41 PFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRDNPRRL--RVLLRYKVGDQEEK-
320 330 340 350 360
390
pF1KE1 VSNDYKMR
..:. :
CCDS41 -TKDFAMED
370
394 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 21:32:34 2016 done: Sun Nov 6 21:32:34 2016
Total Scan time: 2.810 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]