Result of FASTA (ccds) for
pFN21AE1838
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1838, 354 aa
1>>>pF1KE1838 354 - 354 aa - 354 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5892+/-0.000861; mu= 14.2050+/- 0.052
mean_var=59.5316+/-11.852, 0's: 0 Z-trim(105.3): 16 B-trim: 0 in 0/49
Lambda= 0.166227
statistics sampled from 8339 (8348) to 8339 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.639), E-opt: 0.2 (0.256), width: 16
Scan time: 2.720
The best scores are: opt bits E(32554)
CCDS5640.1 PON2 gene_id:5445|Hs108|chr7 ( 354) 2334 568.2 3.7e-162
CCDS5638.1 PON1 gene_id:5444|Hs108|chr7 ( 355) 1634 400.3 1.3e-111
CCDS5639.1 PON3 gene_id:5446|Hs108|chr7 ( 354) 1608 394.1 9.6e-110
CCDS47644.1 PON2 gene_id:5445|Hs108|chr7 ( 342) 1455 357.4 1e-98
>>CCDS5640.1 PON2 gene_id:5445|Hs108|chr7 (354 aa)
initn: 2334 init1: 2334 opt: 2334 Z-score: 3024.7 bits: 568.2 E(32554): 3.7e-162
Smith-Waterman score: 2334; 100.0% identity (100.0% similar) in 354 aa overlap (1-354:1-354)
10 20 30 40 50 60
pF1KE1 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 DNDDTVYLFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 DNDDTVYLFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS
250 260 270 280 290 300
310 320 330 340 350
pF1KE1 SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL
310 320 330 340 350
>>CCDS5638.1 PON1 gene_id:5444|Hs108|chr7 (355 aa)
initn: 1642 init1: 1258 opt: 1634 Z-score: 2117.4 bits: 400.3 E(32554): 1.3e-111
Smith-Waterman score: 1634; 65.9% identity (89.3% similar) in 355 aa overlap (1-354:1-355)
10 20 30 40 50 60
pF1KE1 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN
:..:.:. :::..:::. .. . ..::.: :::. :.::.:.:.::::.::::..::::
CCDS56 MAKLIALTLLGMGLALFRNHQSSYQTRLNALREVQPVELPNCNLVKGIETGSEDLEILPN
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRG-FDLASFNPHGISTF
::::.: :::.::..:: :..:: ::.:::.:: : . :: :. . ::..::::::::::
CCDS56 GLAFISSGLKYPGIKSFNPNSPGKILLMDLNEEDPTVLELGITGSKFDVSSFNPHGISTF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 IDNDDTVYLFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYA
:.:...::.:::::. :.:::.:::.: :.:::::::..:.:::..:::.:::: :::.
CCDS56 TDEDNAMYLLVVNHPDAKSTVELFKFQEEEKSLLHLKTIRHKLLPNLNDIVAVGPEHFYG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE1 TNDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADI
:::::: ::.:. : ::.: :. ::::::.::.::::::: ::::::::: ::.:.:..
CCDS56 TNDHYFLDPYLQSWEMYLGLAWSYVVYYSPSEVRVVAEGFDFANGINISPDGKYVYIAEL
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE1 LAHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPP
:::.::: :::.: .:: :: :...:::::.:.:: .::.::::::::.:.: :: .:::
CCDS56 LAHKIHVYEKHANWTLTPLKSLDFNTLVDNISVDPETGDLWVGCHPNGMKIFFYDSENPP
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE1 SSEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL
.::::::::::.:.: :: :::.::.:::::.::::: :::::::..:.::::::
CCDS56 ASEVLRIQNILTEEPKVTQVYAENGTVLQGSTVASVYKGKLLIGTVFHKALYCEL
310 320 330 340 350
>>CCDS5639.1 PON3 gene_id:5446|Hs108|chr7 (354 aa)
initn: 1608 init1: 1608 opt: 1608 Z-score: 2083.8 bits: 394.1 E(32554): 9.6e-110
Smith-Waterman score: 1608; 65.5% identity (89.8% similar) in 354 aa overlap (1-354:1-354)
10 20 30 40 50 60
pF1KE1 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN
::.:::. :::..:.:.:: .::.:.:..:::::: :. .::::. .:.:::::::::.
CCDS56 MGKLVALVLLGVGLSLVGEMFLAFRERVNASREVEPVEPENCHLIEELESGSEDIDILPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI
::::.: :::.::. .::::.:: :..:::.:..:::. :.:: ::: ::::::: ::
CCDS56 GLAFISSGLKYPGMPNFAPDEPGKIFLMDLNEQNPRAQALEISGGFDKELFNPHGISIFI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 DNDDTVYLFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT
:.:.::::.:::::..:.::::::::: . ::..:::.::::: :::::...:: .::::
CCDS56 DKDNTVYLYVVNHPHMKSTVEIFKFEEQQRSLVYLKTIKHELLKSVNDIVVLGPEQFYAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL
::::.. .:...: :.:.:. :..::: ::::::.:: :::::..: :.::.::::.
CCDS56 RDHYFTNSLLSFFEMILDLRWTYVLFYSPREVKVVAKGFCSANGITVSADQKYVYVADVA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS
:..::..::: : .::::::..: ::::::..::..::: .::::: .::. :.:..::.
CCDS56 AKNIHIMEKHDNWDLTQLKVIQLGTLVDNLTVDPATGDILAGCHPNPMKLLNYNPEDPPG
250 260 270 280 290 300
310 320 330 340 350
pF1KE1 SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL
::::::::.::::: :.::::::::::::.:::::: ::.::::..:..:::::
CCDS56 SEVLRIQNVLSEKPRVSTVYANNGSVLQGTSVASVYHGKILIGTVFHKTLYCEL
310 320 330 340 350
>>CCDS47644.1 PON2 gene_id:5445|Hs108|chr7 (342 aa)
initn: 2267 init1: 1450 opt: 1455 Z-score: 1885.7 bits: 357.4 E(32554): 1e-98
Smith-Waterman score: 2216; 96.6% identity (96.6% similar) in 354 aa overlap (1-354:1-342)
10 20 30 40 50 60
pF1KE1 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 DNDDTVYLFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT
:: ::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DN------------EFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT
130 140 150 160
190 200 210 220 230 240
pF1KE1 NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE1 AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS
230 240 250 260 270 280
310 320 330 340 350
pF1KE1 SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL
290 300 310 320 330 340
354 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 09:57:26 2016 done: Sun Nov 6 09:57:27 2016
Total Scan time: 2.720 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]