Result of FASTA (omim) for
pFN21AE1809
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1809, 325 aa
1>>>pF1KE1809 325 - 325 aa - 325 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1685+/-0.000394; mu= 16.4692+/- 0.024
mean_var=63.0638+/-12.504, 0's: 0 Z-trim(111.6): 24 B-trim: 0 in 0/49
Lambda= 0.161504
statistics sampled from 20254 (20265) to 20254 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.619), E-opt: 0.2 (0.238), width: 16
Scan time: 5.840
The best scores are: opt bits E(85289)
NP_001602 (OMIM: 171640,607944) tartrate-resistant ( 325) 2201 521.6 8.5e-148
NP_001104504 (OMIM: 171640,607944) tartrate-resist ( 325) 2201 521.6 8.5e-148
NP_001104505 (OMIM: 171640,607944) tartrate-resist ( 325) 2201 521.6 8.5e-148
NP_001104506 (OMIM: 171640,607944) tartrate-resist ( 325) 2201 521.6 8.5e-148
XP_011526371 (OMIM: 171640,607944) PREDICTED: tart ( 325) 2201 521.6 8.5e-148
NP_001308952 (OMIM: 171640,607944) tartrate-resist ( 325) 2201 521.6 8.5e-148
XP_005259995 (OMIM: 171640,607944) PREDICTED: tart ( 325) 2201 521.6 8.5e-148
>>NP_001602 (OMIM: 171640,607944) tartrate-resistant aci (325 aa)
initn: 2201 init1: 2201 opt: 2201 Z-score: 2774.4 bits: 521.6 E(85289): 8.5e-148
Smith-Waterman score: 2201; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325)
10 20 30 40 50 60
pF1KE1 MDMWTALLILQALLLPSLADGATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDMWTALLILQALLLPSLADGATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 ARTQLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARTQLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 DHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSK
250 260 270 280 290 300
310 320
pF1KE1 EMTVTYIEASGKSLFKTRLPRRARP
:::::::::::::::::::::::::
NP_001 EMTVTYIEASGKSLFKTRLPRRARP
310 320
>>NP_001104504 (OMIM: 171640,607944) tartrate-resistant (325 aa)
initn: 2201 init1: 2201 opt: 2201 Z-score: 2774.4 bits: 521.6 E(85289): 8.5e-148
Smith-Waterman score: 2201; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325)
10 20 30 40 50 60
pF1KE1 MDMWTALLILQALLLPSLADGATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDMWTALLILQALLLPSLADGATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 ARTQLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARTQLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 DHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSK
250 260 270 280 290 300
310 320
pF1KE1 EMTVTYIEASGKSLFKTRLPRRARP
:::::::::::::::::::::::::
NP_001 EMTVTYIEASGKSLFKTRLPRRARP
310 320
>>NP_001104505 (OMIM: 171640,607944) tartrate-resistant (325 aa)
initn: 2201 init1: 2201 opt: 2201 Z-score: 2774.4 bits: 521.6 E(85289): 8.5e-148
Smith-Waterman score: 2201; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325)
10 20 30 40 50 60
pF1KE1 MDMWTALLILQALLLPSLADGATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDMWTALLILQALLLPSLADGATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 ARTQLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARTQLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 DHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSK
250 260 270 280 290 300
310 320
pF1KE1 EMTVTYIEASGKSLFKTRLPRRARP
:::::::::::::::::::::::::
NP_001 EMTVTYIEASGKSLFKTRLPRRARP
310 320
>>NP_001104506 (OMIM: 171640,607944) tartrate-resistant (325 aa)
initn: 2201 init1: 2201 opt: 2201 Z-score: 2774.4 bits: 521.6 E(85289): 8.5e-148
Smith-Waterman score: 2201; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325)
10 20 30 40 50 60
pF1KE1 MDMWTALLILQALLLPSLADGATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDMWTALLILQALLLPSLADGATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 ARTQLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARTQLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 DHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSK
250 260 270 280 290 300
310 320
pF1KE1 EMTVTYIEASGKSLFKTRLPRRARP
:::::::::::::::::::::::::
NP_001 EMTVTYIEASGKSLFKTRLPRRARP
310 320
>>XP_011526371 (OMIM: 171640,607944) PREDICTED: tartrate (325 aa)
initn: 2201 init1: 2201 opt: 2201 Z-score: 2774.4 bits: 521.6 E(85289): 8.5e-148
Smith-Waterman score: 2201; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325)
10 20 30 40 50 60
pF1KE1 MDMWTALLILQALLLPSLADGATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDMWTALLILQALLLPSLADGATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 ARTQLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARTQLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 DHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSK
250 260 270 280 290 300
310 320
pF1KE1 EMTVTYIEASGKSLFKTRLPRRARP
:::::::::::::::::::::::::
XP_011 EMTVTYIEASGKSLFKTRLPRRARP
310 320
>>NP_001308952 (OMIM: 171640,607944) tartrate-resistant (325 aa)
initn: 2201 init1: 2201 opt: 2201 Z-score: 2774.4 bits: 521.6 E(85289): 8.5e-148
Smith-Waterman score: 2201; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325)
10 20 30 40 50 60
pF1KE1 MDMWTALLILQALLLPSLADGATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDMWTALLILQALLLPSLADGATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 ARTQLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARTQLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 DHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSK
250 260 270 280 290 300
310 320
pF1KE1 EMTVTYIEASGKSLFKTRLPRRARP
:::::::::::::::::::::::::
NP_001 EMTVTYIEASGKSLFKTRLPRRARP
310 320
>>XP_005259995 (OMIM: 171640,607944) PREDICTED: tartrate (325 aa)
initn: 2201 init1: 2201 opt: 2201 Z-score: 2774.4 bits: 521.6 E(85289): 8.5e-148
Smith-Waterman score: 2201; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325)
10 20 30 40 50 60
pF1KE1 MDMWTALLILQALLLPSLADGATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDMWTALLILQALLLPSLADGATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 ARTQLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ARTQLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 DHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSK
250 260 270 280 290 300
310 320
pF1KE1 EMTVTYIEASGKSLFKTRLPRRARP
:::::::::::::::::::::::::
XP_005 EMTVTYIEASGKSLFKTRLPRRARP
310 320
325 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 00:57:36 2016 done: Tue Nov 8 00:57:37 2016
Total Scan time: 5.840 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]