Result of FASTA (ccds) for
pFN21AE1802
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1802, 313 aa
1>>>pF1KE1802 313 - 313 aa - 313 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8497+/-0.0007; mu= 12.9182+/- 0.042
mean_var=63.9433+/-12.491, 0's: 0 Z-trim(108.9): 15 B-trim: 0 in 0/49
Lambda= 0.160390
statistics sampled from 10499 (10509) to 10499 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.698), E-opt: 0.2 (0.323), width: 16
Scan time: 2.530
The best scores are: opt bits E(32554)
CCDS1767.2 SPDYA gene_id:245711|Hs108|chr2 ( 313) 2175 511.6 3.2e-145
CCDS31606.1 SPDYC gene_id:387778|Hs108|chr11 ( 293) 629 153.8 1.5e-37
CCDS45609.1 SPDYE4 gene_id:388333|Hs108|chr17 ( 237) 354 90.2 1.7e-18
CCDS5475.1 SPDYE1 gene_id:285955|Hs108|chr7 ( 336) 281 73.3 2.9e-13
CCDS78241.1 SPDYE5 gene_id:442590|Hs108|chr7 ( 402) 266 69.8 3.9e-12
CCDS78265.1 SPDYE6 gene_id:729597|Hs108|chr7 ( 402) 257 67.8 1.6e-11
CCDS59507.1 SPDYE2B gene_id:100310812|Hs108|chr7 ( 402) 256 67.5 1.9e-11
CCDS34716.2 SPDYE2 gene_id:441273|Hs108|chr7 ( 402) 256 67.5 1.9e-11
>>CCDS1767.2 SPDYA gene_id:245711|Hs108|chr2 (313 aa)
initn: 2175 init1: 2175 opt: 2175 Z-score: 2720.6 bits: 511.6 E(32554): 3.2e-145
Smith-Waterman score: 2175; 100.0% identity (100.0% similar) in 313 aa overlap (1-313:1-313)
10 20 30 40 50 60
pF1KE1 MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKSKRPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKSKRPK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 GPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 INFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 INFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 CCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRRYVRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 CCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRRYVRL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 GLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQAYTGSEVVNDHQSNKGKKTNFLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 GLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQAYTGSEVVNDHQSNKGKKTNFLK
250 260 270 280 290 300
310
pF1KE1 KDKSMEWFTGSEE
:::::::::::::
CCDS17 KDKSMEWFTGSEE
310
>>CCDS31606.1 SPDYC gene_id:387778|Hs108|chr11 (293 aa)
initn: 623 init1: 623 opt: 629 Z-score: 787.7 bits: 153.8 E(32554): 1.5e-37
Smith-Waterman score: 629; 48.0% identity (71.8% similar) in 202 aa overlap (67-268:55-254)
40 50 60 70 80 90
pF1KE1 PICKDNWQAFEKNTHNNNKSKRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIA
:.:.. ::..:..:...:.:: : : .:.
CCDS31 DPTTSPVVTTQVELGGCSRQGGGNGFLRFRQHQEVQAFLSLLEDSFVQEFLSKDPCFQIS
30 40 50 60 70 80
100 110 120 130 140 150
pF1KE1 DKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKL
:::::::..:::.::.. .::.:. ..:.:::::: .::: : : :::::::::.:
CCDS31 DKYLLAMVLVYFQRAHLKLSEYTHSSLFLALYLANDMEEDLEGPKCEIFPWALGKDWCLR
90 100 110 120 130 140
160 170 180 190 200 210
pF1KE1 FPNFLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQ
.::. ::.:: :. .::.:::.::::::: : :. : :.: ::.:. : . :.
CCDS31 VGKFLHQRDKLWARMGFRAVVSRQCCEEVMAKEPFHWAWTRDRRPHHGGVQRVCPQVPVR
150 160 170 180 190 200
220 230 240 250 260 270
pF1KE1 LPRGPSATPVDCSLCGKKRRYVRLGLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPS
:::::. .: :: :: .. :. : :. . ..: : : : ::
CCDS31 LPRGPGLSPPHCSPCGLPQHCSSHLLKPVS--SKCPSLTSECHRPPSQNYLSRVKNAWGG
210 220 230 240 250 260
280 290 300 310
pF1KE1 QAYTGSEVVNDHQSNKGKKTNFLKKDKSMEWFTGSEE
CCDS31 DFLIVLPPQMQLEPGTYSLRIFPKPPARPGH
270 280 290
>>CCDS45609.1 SPDYE4 gene_id:388333|Hs108|chr17 (237 aa)
initn: 327 init1: 237 opt: 354 Z-score: 445.4 bits: 90.2 E(32554): 1.7e-18
Smith-Waterman score: 354; 35.6% identity (65.5% similar) in 194 aa overlap (11-201:46-235)
10 20 30
pF1KE1 MRHNQMCCETPPTVTVYVKSG-SNRSHQP-KKPITLKR-P
: .. . :: :..:.. .. . :.: :
CCDS45 QPSTTVRSPEVVVDDEVPGPSAPWIDPSPQPQSLGLKRKSEWSDESEEELEEELELERAP
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE1 ICKDNWQAFEKNTHNNNKSKRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIAD
.:.: . : . : :: .. .. .... :: .:. : ..: :: : ...:
CCDS45 EPEDTW-VVETLCGLKMKLKRKRASSVLPEHHE--AFNRLLGDPVVQKFLAWDKDLRVSD
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE1 KYLLAMTFVYFKRAKFTISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLF
::::::...::.:: . .. ::.::.:::::. .:::.. : .:: . :::. .
CCDS45 KYLLAMVIAYFSRAGLFSWQYQRIHFFLALYLASDMEEDNQAPKQDIFSFLYGKNYSQR-
140 150 160 170 180 190
160 170 180 190 200 210
pF1KE1 PNFLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQL
: : ::: :: . .:. :: . ::..: : :..: :.:..
CCDS45 PLFHKLRYQLLCSMRWRTWVSPEEMEEIQAYDPEHWVWARDRTLIS
200 210 220 230
220 230 240 250 260 270
pF1KE1 PRGPSATPVDCSLCGKKRRYVRLGLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQ
>>CCDS5475.1 SPDYE1 gene_id:285955|Hs108|chr7 (336 aa)
initn: 324 init1: 253 opt: 281 Z-score: 351.5 bits: 73.3 E(32554): 2.9e-13
Smith-Waterman score: 281; 36.1% identity (65.8% similar) in 158 aa overlap (22-179:111-262)
10 20 30 40 50
pF1KE1 MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTH
:..:.. . . .: .. : : :
CCDS54 DFNSQLAPGVDPSPPHRSFCWKRKMEWWDKSEESEEEPRKVLAPEP--EEIWVA-EMLCG
90 100 110 120 130
60 70 80 90 100 110
pF1KE1 NNNKSKRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRA
. : :: . .. .... :: .:..: .:. :: : ...:::::::...::.::
CCDS54 LKMKLKRRRVSLVLPEHHE--AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRA
140 150 160 170 180 190
120 130 140 150 160 170
pF1KE1 KFTISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRI
: .. :..::.:::::: .:::.:..: .:: . ::: :. .: . : : ::. .
CCDS54 GFPSWQYQRLHFFLALYLANDMEEDDEDSKQNIFHFLYGKN-RSRIPLLRKRRFQLYRSM
200 210 220 230 240 250
180 190 200 210 220 230
pF1KE1 DYRAIVSRRCCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLC
. :: .:
CCDS54 NPRARKNRSHIPLVRKRRFQLRRCMNPRARKNRSQIVLFQKRRFHFFCSMSCRAWVSPEE
260 270 280 290 300 310
>>CCDS78241.1 SPDYE5 gene_id:442590|Hs108|chr7 (402 aa)
initn: 327 init1: 256 opt: 266 Z-score: 331.4 bits: 69.8 E(32554): 3.9e-12
Smith-Waterman score: 266; 37.6% identity (65.1% similar) in 149 aa overlap (27-175:158-299)
10 20 30 40 50
pF1KE1 MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKS
.:.: .. : .. : : : . :
CCDS78 PGVDPSPPHRSFCWKRKMEWWDESEESLEEEPRKVLA---PEPEEIWVA-EMLCGLKMKL
130 140 150 160 170 180
60 70 80 90 100 110
pF1KE1 KRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTIS
:: . .. .... :: .:..: .:. :: : ...:::::::...::.:: :
CCDS78 KRRRVSLVLPEHHE--AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSW
190 200 210 220 230 240
120 130 140 150 160 170
pF1KE1 EHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAI
.. ::.::.:::::: .:::.:..: .:: . ::: :. .: . : :: .. ::
CCDS78 QYQRIHFFLALYLANDMEEDDEDSKQNIFHFLYGKN-RSRIPLLRKRWFQLGRSMNPRAR
250 260 270 280 290 300
180 190 200 210 220 230
pF1KE1 VSRRCCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRR
CCDS78 KKRSRIPLLRKRRFQLGRSMNPRARKNRSRIPLLRKRRFQLGRSMNLRARKNRSQIVLFQ
310 320 330 340 350 360
>>CCDS78265.1 SPDYE6 gene_id:729597|Hs108|chr7 (402 aa)
initn: 316 init1: 245 opt: 257 Z-score: 320.2 bits: 67.8 E(32554): 1.6e-11
Smith-Waterman score: 257; 36.6% identity (64.1% similar) in 153 aa overlap (27-179:158-303)
10 20 30 40 50
pF1KE1 MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKS
.:.: .. : .. : : : . :
CCDS78 PGVDPSPPHRSFCWKRKMEWWDESEESLEEEPRKVLA---PEPEEIWVA-EMLCGLKMKL
130 140 150 160 170 180
60 70 80 90 100 110
pF1KE1 KRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTIS
:: . .. .... :: .:..: .:. :: : ...:::::::...::.:: :
CCDS78 KRRRVSLVLPEHHE--AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSW
190 200 210 220 230 240
120 130 140 150 160 170
pF1KE1 EHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAI
.. ::.::.:::::: .:::.:..: .:: . :: :. .: . : :: .. ::
CCDS78 QYQRIHFFLALYLANDMEEDDEDSKQNIFHFLYRKN-RSRIPLLRKRWFQLGHSMNPRAR
250 260 270 280 290 300
180 190 200 210 220 230
pF1KE1 VSRRCCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRR
.:
CCDS78 KNRSRIPLLRKRRFQLYRSTNPRARKNRSRIPLLRKHRFQLYRSMNSRARKNRSQIVLFQ
310 320 330 340 350 360
>>CCDS59507.1 SPDYE2B gene_id:100310812|Hs108|chr7 (402 aa)
initn: 316 init1: 245 opt: 256 Z-score: 318.9 bits: 67.5 E(32554): 1.9e-11
Smith-Waterman score: 256; 36.6% identity (64.1% similar) in 153 aa overlap (27-179:158-303)
10 20 30 40 50
pF1KE1 MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKS
.:.: .. : .. : : : . :
CCDS59 PGVDPSPPHRSFCWKRKMEWWDESEESLEEEPRKVLA---PEPEEIWVA-EMLCGLKMKL
130 140 150 160 170 180
60 70 80 90 100 110
pF1KE1 KRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTIS
:: . .. .... :: .:..: .:. :: : ...:::::::...::.:: :
CCDS59 KRRRVSLVLPEHHE--AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSW
190 200 210 220 230 240
120 130 140 150 160 170
pF1KE1 EHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAI
.. ::.::.:::::: .:::.:..: .:: . :: :. .: . : :: .. ::
CCDS59 QYQRIHFFLALYLANDMEEDDEDSKQNIFHFLYRKN-RSRIPLLRKPWFQLGHSMNPRAR
250 260 270 280 290 300
180 190 200 210 220 230
pF1KE1 VSRRCCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRR
.:
CCDS59 KNRSRIPLLRKRRFQLYRSTNPRARKNRSRIPLLRKRRFQLYRSMNSRARKNRSQIVLFQ
310 320 330 340 350 360
>>CCDS34716.2 SPDYE2 gene_id:441273|Hs108|chr7 (402 aa)
initn: 316 init1: 245 opt: 256 Z-score: 318.9 bits: 67.5 E(32554): 1.9e-11
Smith-Waterman score: 256; 36.6% identity (64.1% similar) in 153 aa overlap (27-179:158-303)
10 20 30 40 50
pF1KE1 MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKS
.:.: .. : .. : : : . :
CCDS34 PGVDPSPPHRSFCWKRKMEWWDESEESLEEEPRKVLA---PEPEEIWVA-EMLCGLKMKL
130 140 150 160 170 180
60 70 80 90 100 110
pF1KE1 KRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTIS
:: . .. .... :: .:..: .:. :: : ...:::::::...::.:: :
CCDS34 KRRRVSLVLPEHHE--AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSW
190 200 210 220 230 240
120 130 140 150 160 170
pF1KE1 EHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAI
.. ::.::.:::::: .:::.:..: .:: . :: :. .: . : :: .. ::
CCDS34 QYQRIHFFLALYLANDMEEDDEDSKQNIFHFLYRKN-RSRIPLLRKPWFQLGHSMNPRAR
250 260 270 280 290 300
180 190 200 210 220 230
pF1KE1 VSRRCCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRR
.:
CCDS34 KNRSRIPLLRKRRFQLYRSTNPRARKNRSRIPLLRKRRFQLYRSMNSRARKNRSQIVLFQ
310 320 330 340 350 360
313 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 18:35:36 2016 done: Sun Nov 6 18:35:36 2016
Total Scan time: 2.530 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]