Result of FASTA (omim) for
pFN21AE1743
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1743, 245 aa
1>>>pF1KE1743 245 - 245 aa - 245 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9307+/-0.000364; mu= 10.3942+/- 0.023
mean_var=209.4521+/-42.397, 0's: 0 Z-trim(121.3): 443 B-trim: 1965 in 1/54
Lambda= 0.088620
statistics sampled from 37204 (37671) to 37204 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.767), E-opt: 0.2 (0.442), width: 16
Scan time: 6.680
The best scores are: opt bits E(85289)
NP_057075 (OMIM: 120550,613652) complement C1q sub ( 245) 1718 231.3 1.2e-60
NP_000482 (OMIM: 120570,613652) complement C1q sub ( 253) 601 88.5 1.2e-17
XP_011540361 (OMIM: 120570,613652) PREDICTED: comp ( 253) 601 88.5 1.2e-17
NP_758957 (OMIM: 120575,613652) complement C1q sub ( 245) 539 80.6 2.8e-15
NP_001107573 (OMIM: 120575,613652) complement C1q ( 245) 539 80.6 2.8e-15
NP_001008224 (OMIM: 615229) complement C1q-like pr ( 238) 420 65.4 1e-10
NP_056460 (OMIM: 605670,608752) complement C1q tum ( 243) 416 64.9 1.5e-10
NP_001265360 (OMIM: 605670,608752) complement C1q ( 243) 416 64.9 1.5e-10
NP_004788 (OMIM: 605441,612556) adiponectin precur ( 244) 415 64.7 1.7e-10
NP_001171271 (OMIM: 605441,612556) adiponectin pre ( 244) 415 64.7 1.7e-10
XP_011536572 (OMIM: 615229) PREDICTED: complement ( 227) 383 60.6 2.7e-09
NP_112207 (OMIM: 612045) complement C1q tumor necr ( 246) 319 52.5 8.3e-07
NP_940995 (OMIM: 610365) complement C1q tumor necr ( 281) 319 52.5 9e-07
NP_699203 (OMIM: 610365) complement C1q tumor necr ( 281) 319 52.5 9e-07
NP_112230 (OMIM: 610365) complement C1q tumor necr ( 281) 319 52.5 9e-07
XP_006721729 (OMIM: 610365) PREDICTED: complement ( 291) 319 52.6 9.1e-07
NP_852100 (OMIM: 612045) complement C1q tumor necr ( 319) 319 52.6 9.7e-07
XP_006721727 (OMIM: 610365) PREDICTED: complement ( 330) 319 52.6 9.9e-07
XP_016884061 (OMIM: 614910) PREDICTED: complement ( 259) 317 52.2 1e-06
XP_016884059 (OMIM: 614910) PREDICTED: complement ( 259) 317 52.2 1e-06
XP_016884062 (OMIM: 614910) PREDICTED: complement ( 259) 317 52.2 1e-06
XP_016884063 (OMIM: 614910) PREDICTED: complement ( 259) 317 52.2 1e-06
XP_011528159 (OMIM: 614910) PREDICTED: complement ( 259) 317 52.2 1e-06
XP_016884060 (OMIM: 614910) PREDICTED: complement ( 259) 317 52.2 1e-06
NP_940996 (OMIM: 610365) complement C1q tumor necr ( 199) 315 51.8 1e-06
XP_016879615 (OMIM: 610365) PREDICTED: complement ( 199) 315 51.8 1e-06
NP_872292 (OMIM: 614910) complement C1q tumor necr ( 278) 317 52.3 1.1e-06
XP_016884058 (OMIM: 614910) PREDICTED: complement ( 278) 317 52.3 1.1e-06
NP_114116 (OMIM: 614910) complement C1q tumor necr ( 278) 317 52.3 1.1e-06
XP_006721726 (OMIM: 610365) PREDICTED: complement ( 379) 319 52.7 1.1e-06
XP_011520785 (OMIM: 614147) PREDICTED: complement ( 252) 307 50.9 2.4e-06
NP_997302 (OMIM: 614147) complement C1q tumor necr ( 252) 307 50.9 2.4e-06
XP_016874320 (OMIM: 108300,120140,132450,150600,15 (1305) 296 50.5 1.8e-05
NP_149162 (OMIM: 108300,120140,132450,150600,15121 (1418) 296 50.5 1.9e-05
XP_016874319 (OMIM: 108300,120140,132450,150600,15 (1465) 296 50.5 1.9e-05
NP_001835 (OMIM: 108300,120140,132450,150600,15121 (1487) 296 50.5 1.9e-05
XP_016874318 (OMIM: 108300,120140,132450,150600,15 (1534) 296 50.5 1.9e-05
XP_016874317 (OMIM: 108300,120140,132450,150600,15 (1535) 296 50.5 2e-05
XP_016871179 (OMIM: 120350,616720) PREDICTED: coll ( 657) 287 48.9 2.6e-05
XP_016871171 (OMIM: 120350,616720) PREDICTED: coll ( 684) 287 48.9 2.6e-05
XP_016871169 (OMIM: 120350,616720) PREDICTED: coll ( 696) 287 49.0 2.7e-05
XP_016871166 (OMIM: 120350,616720) PREDICTED: coll ( 713) 287 49.0 2.7e-05
XP_005257116 (OMIM: 114000,120150,130000,130060,16 (1158) 290 49.6 2.8e-05
XP_016865740 (OMIM: 120290,184840,215150,277610,60 (1342) 291 49.8 2.8e-05
XP_011512604 (OMIM: 120290,184840,215150,277610,60 (1365) 291 49.8 2.8e-05
NP_001839 (OMIM: 120220,158810,254090) collagen al (1028) 289 49.4 2.8e-05
XP_011512602 (OMIM: 120290,184840,215150,277610,60 (1438) 291 49.9 2.9e-05
XP_011512601 (OMIM: 120290,184840,215150,277610,60 (1498) 291 49.9 3e-05
XP_011522643 (OMIM: 114000,120150,130000,130060,16 (1398) 290 49.7 3.1e-05
NP_542410 (OMIM: 120290,184840,215150,277610,60186 (1629) 291 49.9 3.2e-05
>>NP_057075 (OMIM: 120550,613652) complement C1q subcomp (245 aa)
initn: 1718 init1: 1718 opt: 1718 Z-score: 1209.9 bits: 231.3 E(85289): 1.2e-60
Smith-Waterman score: 1718; 100.0% identity (100.0% similar) in 245 aa overlap (1-245:1-245)
10 20 30 40 50 60
pF1KE1 MEGPRGWLVLCVLAISLASMVTEDLCRAPDGKKGEAGRPGRRGRPGLKGEQGEPGAPGIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MEGPRGWLVLCVLAISLASMVTEDLCRAPDGKKGEAGRPGRRGRPGLKGEQGEPGAPGIR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TGIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQPRPAFSAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 TGIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQPRPAFSAI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RRNPPMGGNVVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQWEICLSIVSSSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 RRNPPMGGNVVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQWEICLSIVSSSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHIYQGSEADSVFSGFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 GQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHIYQGSEADSVFSGFL
190 200 210 220 230 240
pF1KE1 IFPSA
:::::
NP_057 IFPSA
>>NP_000482 (OMIM: 120570,613652) complement C1q subcomp (253 aa)
initn: 342 init1: 202 opt: 601 Z-score: 438.0 bits: 88.5 E(85289): 1.2e-17
Smith-Waterman score: 601; 41.3% identity (67.1% similar) in 252 aa overlap (1-243:3-249)
10 20 30 40 50
pF1KE1 MEGPRGWL--VLCVLAISLASMVTEDL-CRAPD---GKKGEAGRPGRRGRPGLKGEQG
:. : : . .. .: ..: .. .: : .: : : : :: :.:: : .:
NP_000 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 EPGAPGIRTGIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQ
: : ::. .: .: :..:.:: ::::::: :: :: :. : :: : :: :. :
NP_000 EKGLPGL-AGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKAT
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 PRPAFSAIRR-NPPMGGNVVI-FDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQWE
. :::: : : :. . .: :: ::::... :. .::.:.: ::: ::::... :. .
NP_000 QKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSRGN
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 ICLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHIYQGS
.:.... . : .... . ::: . . :::..:::::.:.::..:... :.. . :
NP_000 LCVNLMRG-RERAQKVVTFCDYAYN-TFQVTTGGMVLKLEQGENVFLQATDKNSLL--GM
180 190 200 210 220 230
240
pF1KE1 E-ADSVFSGFLIFPSA
: :.:.:::::.::
NP_000 EGANSIFSGFLLFPDMEA
240 250
>>XP_011540361 (OMIM: 120570,613652) PREDICTED: compleme (253 aa)
initn: 342 init1: 202 opt: 601 Z-score: 438.0 bits: 88.5 E(85289): 1.2e-17
Smith-Waterman score: 601; 41.3% identity (67.1% similar) in 252 aa overlap (1-243:3-249)
10 20 30 40 50
pF1KE1 MEGPRGWL--VLCVLAISLASMVTEDL-CRAPD---GKKGEAGRPGRRGRPGLKGEQG
:. : : . .. .: ..: .. .: : .: : : : :: :.:: : .:
XP_011 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 EPGAPGIRTGIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQ
: : ::. .: .: :..:.:: ::::::: :: :: :. : :: : :: :. :
XP_011 EKGLPGL-AGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKAT
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 PRPAFSAIRR-NPPMGGNVVI-FDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQWE
. :::: : : :. . .: :: ::::... :. .::.:.: ::: ::::... :. .
XP_011 QKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSRGN
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 ICLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHIYQGS
.:.... . : .... . ::: . . :::..:::::.:.::..:... :.. . :
XP_011 LCVNLMRG-RERAQKVVTFCDYAYN-TFQVTTGGMVLKLEQGENVFLQATDKNSLL--GM
180 190 200 210 220 230
240
pF1KE1 E-ADSVFSGFLIFPSA
: :.:.:::::.::
XP_011 EGANSIFSGFLLFPDMEA
240 250
>>NP_758957 (OMIM: 120575,613652) complement C1q subcomp (245 aa)
initn: 318 init1: 169 opt: 539 Z-score: 395.3 bits: 80.6 E(85289): 2.8e-15
Smith-Waterman score: 539; 38.8% identity (63.2% similar) in 242 aa overlap (8-243:15-244)
10 20 30 40 50
pF1KE1 MEGPRGWLVLCVLAISLASMVTEDLCRAPDGKKGEAGRPGRRGRPGLKGEQGE
:.: .: . : .... : . : : : ::. : :: : .::
NP_758 MDVGPSSLPHLGLKLLLLLLLLPLRGQANTG-CYGIPGMPGLPGAPGKDGYDGLPGPKGE
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 PGAPGIRTGIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGN---IK
:: :.: ::.: ::..:::: :.::: :: :: : :.:: : : ::. :
NP_758 PGIPAI-PGIRGPKGQKGEPGLPGHPGK---NGPMGPPGMPGVPGPMGIPGEPGEEGRYK
60 70 80 90 100 110
120 130 140 150 160
pF1KE1 DQPRPAFSAIRRN--PPMGGNVVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQ
.. . .:.. :.. :: .... :..:.:: . :.. .:.:.: ::: :::....
NP_758 QKFQSVFTVTRQTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHASHT
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 WEICLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHI-Y
..:. . :. . . :: :.: :: :::..:.:: :..::. . .
NP_758 ANLCVLLYRSGV----KVVTFCGHTSK-TNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGI
180 190 200 210 220 230
230 240
pF1KE1 QGSEADSVFSGFLIFPSA
::: ::::::::.::
NP_758 QGS--DSVFSGFLLFPD
240
>>NP_001107573 (OMIM: 120575,613652) complement C1q subc (245 aa)
initn: 318 init1: 169 opt: 539 Z-score: 395.3 bits: 80.6 E(85289): 2.8e-15
Smith-Waterman score: 539; 38.8% identity (63.2% similar) in 242 aa overlap (8-243:15-244)
10 20 30 40 50
pF1KE1 MEGPRGWLVLCVLAISLASMVTEDLCRAPDGKKGEAGRPGRRGRPGLKGEQGE
:.: .: . : .... : . : : : ::. : :: : .::
NP_001 MDVGPSSLPHLGLKLLLLLLLLPLRGQANTG-CYGIPGMPGLPGAPGKDGYDGLPGPKGE
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 PGAPGIRTGIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGN---IK
:: :.: ::.: ::..:::: :.::: :: :: : :.:: : : ::. :
NP_001 PGIPAI-PGIRGPKGQKGEPGLPGHPGK---NGPMGPPGMPGVPGPMGIPGEPGEEGRYK
60 70 80 90 100 110
120 130 140 150 160
pF1KE1 DQPRPAFSAIRRN--PPMGGNVVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQ
.. . .:.. :.. :: .... :..:.:: . :.. .:.:.: ::: :::....
NP_001 QKFQSVFTVTRQTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHASHT
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 WEICLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHI-Y
..:. . :. . . :: :.: :: :::..:.:: :..::. . .
NP_001 ANLCVLLYRSGV----KVVTFCGHTSK-TNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGI
180 190 200 210 220 230
230 240
pF1KE1 QGSEADSVFSGFLIFPSA
::: ::::::::.::
NP_001 QGS--DSVFSGFLLFPD
240
>>NP_001008224 (OMIM: 615229) complement C1q-like protei (238 aa)
initn: 297 init1: 167 opt: 420 Z-score: 313.2 bits: 65.4 E(85289): 1e-10
Smith-Waterman score: 421; 37.2% identity (58.4% similar) in 226 aa overlap (26-243:28-237)
10 20 30 40 50
pF1KE1 MEGPRGWLVLCVLAISLASMVTEDLCRA---PDGKKGEAGRPGRRGRPGLKGEQGEPG
:: : : .: :: : :. . ::
NP_001 MVLLLLVAIPLLVHSSRGPAHYEMLGRCRMVCDPHGPRG----PGPDGAPA-SVPPFPPG
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 APGI--RTGIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQP
: : : : ::.: : ::: : ::. : ::: :: : :: :. . : . :
NP_001 AKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG----PGPGGVAPAAGYV---P
60 70 80 90 100
120 130 140 150 160 170
pF1KE1 RPAFSAIRRNPPMGGNVVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQWEICL
: :: : : : : .:. :: :.:: . :. ::.:.: .:: :.:...:: .
NP_001 RIAFYAGLRRPHEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGT
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE1 SIVSS--SRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHIYQGSE
:. .. . :::: : :. .. .. .:....:.:. ::.:... : :... :.
NP_001 SMWADLMKNGQVRASAIAQDADQN--YDYASNSVILHLDVGDEVFIKLD--GGKVHGGNT
170 180 190 200 210 220
240
pF1KE1 AD-SVFSGFLIFPSA
:.::::.:.:
NP_001 NKYSTFSGFIIYPD
230
>>NP_056460 (OMIM: 605670,608752) complement C1q tumor n (243 aa)
initn: 279 init1: 210 opt: 416 Z-score: 310.3 bits: 64.9 E(85289): 1.5e-10
Smith-Waterman score: 416; 35.4% identity (56.0% similar) in 243 aa overlap (5-242:2-233)
10 20 30 40 50 60
pF1KE1 MEGPRGWLVLCVLAISLASMVTEDLCRAPDGKKGEAGRPGRRGRPGLKGEQGEPGAPGIR
: ::: .:... .: .: . :. :. : :: :: .: :: :: :
NP_056 MRPLLVLLLLGLAAGSPPLDD-NKIPSLCPGHPGLPGT---PGHHGSQGLPG----R
10 20 30 40
70 80 90 100 110 120
pF1KE1 TGIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQPRPAFSAI
: .: : : :: .:. :. : ::: : : :: : : : :. . :: ::::
NP_056 DGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAK
50 60 70 80 90 100
130 140 150 160 170
pF1KE1 R---RNPPMGGNVVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQWEICLSIVS
: : :: . . :: :..:.. :. .:.:.: ::: :::. .. . .. :..
NP_056 RSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHA-TVYRASLQFDL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE1 SSRGQ-VRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKG-HIYQGSEADSV
. :. . . : : .::: ...:. :::::. :: . ..::.
NP_056 VKNGESIASFFQFFGGWPKP--ASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDST
170 180 190 200 210 220
240
pF1KE1 FSGFLIFPSA
:::::..
NP_056 FSGFLVYSDWHSSPVFA
230 240
>>NP_001265360 (OMIM: 605670,608752) complement C1q tumo (243 aa)
initn: 279 init1: 210 opt: 416 Z-score: 310.3 bits: 64.9 E(85289): 1.5e-10
Smith-Waterman score: 416; 35.4% identity (56.0% similar) in 243 aa overlap (5-242:2-233)
10 20 30 40 50 60
pF1KE1 MEGPRGWLVLCVLAISLASMVTEDLCRAPDGKKGEAGRPGRRGRPGLKGEQGEPGAPGIR
: ::: .:... .: .: . :. :. : :: :: .: :: :: :
NP_001 MRPLLVLLLLGLAAGSPPLDD-NKIPSLCPGHPGLPGT---PGHHGSQGLPG----R
10 20 30 40
70 80 90 100 110 120
pF1KE1 TGIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQPRPAFSAI
: .: : : :: .:. :. : ::: : : :: : : : :. . :: ::::
NP_001 DGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAK
50 60 70 80 90 100
130 140 150 160 170
pF1KE1 R---RNPPMGGNVVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQWEICLSIVS
: : :: . . :: :..:.. :. .:.:.: ::: :::. .. . .. :..
NP_001 RSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHA-TVYRASLQFDL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE1 SSRGQ-VRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKG-HIYQGSEADSV
. :. . . : : .::: ...:. :::::. :: . ..::.
NP_001 VKNGESIASFFQFFGGWPKP--ASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDST
170 180 190 200 210 220
240
pF1KE1 FSGFLIFPSA
:::::..
NP_001 FSGFLVYSDWHSSPVFA
230 240
>>NP_004788 (OMIM: 605441,612556) adiponectin precursor (244 aa)
initn: 404 init1: 180 opt: 415 Z-score: 309.6 bits: 64.7 E(85289): 1.7e-10
Smith-Waterman score: 416; 34.3% identity (62.9% similar) in 213 aa overlap (34-242:42-240)
10 20 30 40 50 60
pF1KE1 PRGWLVLCVLAISLASMVTEDLCRAPDGKKGEAGRPGRRGRPGLKGEQGEPGAPGIRTGI
: :.::. : :: :..: ::
NP_004 ALPGHDQETTTQGPGVLLPLPKGACTGWMAGIPGHPGHNGAPGRDGRDGTPGE-------
20 30 40 50 60
70 80 90 100 110 120
pF1KE1 QGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQPRPAFSAIRRN
.: ::: : ::.:. :..: :: :: ::.:::.: :: ::. : :::. ..
NP_004 KGEKGDPGLIGPKGDIGETGVPGAEGP---RGFPGIQGRKGEPGEGAYVYRSAFSVGLET
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 PPMGGNVVI-FDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQWEICLSIVSSSRGQ
:. : : .. ::.. :.. .:.: :..:: :::.... . .. :. : .
NP_004 YVTIPNMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHI----TVYMKDVKVSLFK
130 140 150 160 170
190 200 210 220 230
pF1KE1 VRRSLGFC-DTTNKGLFQVVSGGMVLQLQQGDQVWVE--KDPKKGHIYQGSEADSVFSGF
... : : ... . .::...:.:. :::::.. . ... .: .. ::.:.::
NP_004 KDKAMLFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYADNDNDSTFTGF
180 190 200 210 220 230
240
pF1KE1 LIFPSA
:..
NP_004 LLYHDTN
240
>>NP_001171271 (OMIM: 605441,612556) adiponectin precurs (244 aa)
initn: 404 init1: 180 opt: 415 Z-score: 309.6 bits: 64.7 E(85289): 1.7e-10
Smith-Waterman score: 416; 34.3% identity (62.9% similar) in 213 aa overlap (34-242:42-240)
10 20 30 40 50 60
pF1KE1 PRGWLVLCVLAISLASMVTEDLCRAPDGKKGEAGRPGRRGRPGLKGEQGEPGAPGIRTGI
: :.::. : :: :..: ::
NP_001 ALPGHDQETTTQGPGVLLPLPKGACTGWMAGIPGHPGHNGAPGRDGRDGTPGE-------
20 30 40 50 60
70 80 90 100 110 120
pF1KE1 QGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQPRPAFSAIRRN
.: ::: : ::.:. :..: :: :: ::.:::.: :: ::. : :::. ..
NP_001 KGEKGDPGLIGPKGDIGETGVPGAEGP---RGFPGIQGRKGEPGEGAYVYRSAFSVGLET
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 PPMGGNVVI-FDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQWEICLSIVSSSRGQ
:. : : .. ::.. :.. .:.: :..:: :::.... . .. :. : .
NP_001 YVTIPNMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHI----TVYMKDVKVSLFK
130 140 150 160 170
190 200 210 220 230
pF1KE1 VRRSLGFC-DTTNKGLFQVVSGGMVLQLQQGDQVWVE--KDPKKGHIYQGSEADSVFSGF
... : : ... . .::...:.:. :::::.. . ... .: .. ::.:.::
NP_001 KDKAMLFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYADNDNDSTFTGF
180 190 200 210 220 230
240
pF1KE1 LIFPSA
:..
NP_001 LLYHDTN
240
245 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 19:27:54 2016 done: Sun Nov 6 19:27:55 2016
Total Scan time: 6.680 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]