Result of FASTA (omim) for
pFN21AE1730
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1730, 238 aa
1>>>pF1KE1730 238 - 238 aa - 238 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9604+/-0.000365; mu= 16.0163+/- 0.022
mean_var=59.3062+/-12.269, 0's: 0 Z-trim(113.0): 98 B-trim: 1230 in 1/48
Lambda= 0.166542
statistics sampled from 21977 (22081) to 21977 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.61), E-opt: 0.2 (0.259), width: 16
Scan time: 5.630
The best scores are: opt bits E(85289)
NP_001020409 (OMIM: 602644) tetraspanin-4 isoform ( 238) 1621 397.7 9.3e-111
NP_001020408 (OMIM: 602644) tetraspanin-4 isoform ( 238) 1621 397.7 9.3e-111
NP_001020405 (OMIM: 602644) tetraspanin-4 isoform ( 238) 1621 397.7 9.3e-111
NP_001020406 (OMIM: 602644) tetraspanin-4 isoform ( 238) 1621 397.7 9.3e-111
XP_005253159 (OMIM: 602644) PREDICTED: tetraspanin ( 238) 1621 397.7 9.3e-111
NP_003262 (OMIM: 602644) tetraspanin-4 isoform a [ ( 238) 1621 397.7 9.3e-111
NP_001020407 (OMIM: 602644) tetraspanin-4 isoform ( 238) 1621 397.7 9.3e-111
XP_011518638 (OMIM: 602644) PREDICTED: tetraspanin ( 269) 1476 362.9 3.2e-100
XP_011518642 (OMIM: 602644) PREDICTED: tetraspanin ( 174) 1203 297.2 1.2e-80
NP_001020410 (OMIM: 602644) tetraspanin-4 isoform ( 174) 1203 297.2 1.2e-80
XP_011518643 (OMIM: 602644) PREDICTED: tetraspanin ( 174) 1203 297.2 1.2e-80
XP_011518639 (OMIM: 602644) PREDICTED: tetraspanin ( 174) 1203 297.2 1.2e-80
XP_011518640 (OMIM: 602644) PREDICTED: tetraspanin ( 174) 1203 297.2 1.2e-80
XP_011518641 (OMIM: 602644) PREDICTED: tetraspanin ( 174) 1077 266.9 1.6e-71
XP_005253161 (OMIM: 602644) PREDICTED: tetraspanin ( 174) 1077 266.9 1.6e-71
NP_001161792 (OMIM: 613137) tetraspanin-9 [Homo sa ( 239) 984 244.6 1.1e-64
NP_006666 (OMIM: 613137) tetraspanin-9 [Homo sapie ( 239) 984 244.6 1.1e-64
XP_011519215 (OMIM: 613137) PREDICTED: tetraspanin ( 175) 673 169.8 2.7e-42
XP_011519214 (OMIM: 613137) PREDICTED: tetraspanin ( 175) 673 169.8 2.7e-42
XP_016875402 (OMIM: 600769) PREDICTED: tetraspanin ( 237) 514 131.7 1.1e-30
NP_004607 (OMIM: 600769) tetraspanin-8 [Homo sapie ( 237) 514 131.7 1.1e-30
XP_006719646 (OMIM: 600769) PREDICTED: tetraspanin ( 237) 514 131.7 1.1e-30
NP_000551 (OMIM: 151525) leukocyte surface antigen ( 219) 504 129.3 5.4e-30
NP_001035122 (OMIM: 151525) leukocyte surface anti ( 219) 504 129.3 5.4e-30
NP_001244319 (OMIM: 155740) CD63 antigen isoform A ( 238) 454 117.3 2.4e-26
NP_001244318 (OMIM: 155740) CD63 antigen isoform A ( 238) 454 117.3 2.4e-26
NP_001244320 (OMIM: 155740) CD63 antigen isoform A ( 238) 454 117.3 2.4e-26
NP_001771 (OMIM: 155740) CD63 antigen isoform A [H ( 238) 454 117.3 2.4e-26
NP_001254627 (OMIM: 155740) CD63 antigen isoform A ( 238) 454 117.3 2.4e-26
NP_001244321 (OMIM: 155740) CD63 antigen isoform C ( 215) 416 108.1 1.2e-23
NP_620599 (OMIM: 179620,602243,609057) CD151 antig ( 253) 416 108.2 1.4e-23
NP_620598 (OMIM: 179620,602243,609057) CD151 antig ( 253) 416 108.2 1.4e-23
NP_001034579 (OMIM: 179620,602243,609057) CD151 an ( 253) 416 108.2 1.4e-23
NP_004348 (OMIM: 179620,602243,609057) CD151 antig ( 253) 416 108.2 1.4e-23
NP_005715 (OMIM: 613134) tetraspanin-3 isoform 1 [ ( 253) 414 107.7 2e-23
NP_002222 (OMIM: 176807,600623) CD82 antigen isofo ( 267) 391 102.2 9.5e-22
XP_006718286 (OMIM: 176807,600623) PREDICTED: CD82 ( 267) 391 102.2 9.5e-22
NP_001307567 (OMIM: 151525) leukocyte surface anti ( 160) 388 101.3 1e-21
NP_005718 (OMIM: 613170) tetraspanin-1 [Homo sapie ( 241) 390 101.9 1e-21
NP_001765 (OMIM: 151523) leukocyte antigen CD37 is ( 281) 378 99.1 8.6e-21
XP_005259492 (OMIM: 151523) PREDICTED: leukocyte a ( 365) 378 99.1 1.1e-20
XP_011538762 (OMIM: 613170) PREDICTED: tetraspanin ( 258) 370 97.1 3e-20
NP_004347 (OMIM: 186845,613496) CD81 antigen isofo ( 236) 365 95.9 6.5e-20
XP_016877346 (OMIM: 613134) PREDICTED: tetraspanin ( 214) 360 94.7 1.4e-19
NP_001020015 (OMIM: 176807,600623) CD82 antigen is ( 242) 339 89.7 5e-18
NP_004606 (OMIM: 300096,300210) tetraspanin-7 [Hom ( 249) 324 86.1 6.3e-17
NP_005714 (OMIM: 613136) tetraspanin-5 [Homo sapie ( 268) 323 85.8 7.9e-17
NP_003261 (OMIM: 300191) tetraspanin-6 isoform a [ ( 245) 315 83.9 2.8e-16
NP_001244329 (OMIM: 155740) CD63 antigen isoform D ( 156) 312 83.1 3.1e-16
NP_001244330 (OMIM: 155740) CD63 antigen isoform D ( 156) 312 83.1 3.1e-16
>>NP_001020409 (OMIM: 602644) tetraspanin-4 isoform a [H (238 aa)
initn: 1621 init1: 1621 opt: 1621 Z-score: 2109.4 bits: 397.7 E(85289): 9.3e-111
Smith-Waterman score: 1621; 100.0% identity (100.0% similar) in 238 aa overlap (1-238:1-238)
10 20 30 40 50 60
pF1KE1 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
130 140 150 160 170 180
190 200 210 220 230
pF1KE1 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA
190 200 210 220 230
>>NP_001020408 (OMIM: 602644) tetraspanin-4 isoform a [H (238 aa)
initn: 1621 init1: 1621 opt: 1621 Z-score: 2109.4 bits: 397.7 E(85289): 9.3e-111
Smith-Waterman score: 1621; 100.0% identity (100.0% similar) in 238 aa overlap (1-238:1-238)
10 20 30 40 50 60
pF1KE1 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
130 140 150 160 170 180
190 200 210 220 230
pF1KE1 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA
190 200 210 220 230
>>NP_001020405 (OMIM: 602644) tetraspanin-4 isoform a [H (238 aa)
initn: 1621 init1: 1621 opt: 1621 Z-score: 2109.4 bits: 397.7 E(85289): 9.3e-111
Smith-Waterman score: 1621; 100.0% identity (100.0% similar) in 238 aa overlap (1-238:1-238)
10 20 30 40 50 60
pF1KE1 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
130 140 150 160 170 180
190 200 210 220 230
pF1KE1 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA
190 200 210 220 230
>>NP_001020406 (OMIM: 602644) tetraspanin-4 isoform a [H (238 aa)
initn: 1621 init1: 1621 opt: 1621 Z-score: 2109.4 bits: 397.7 E(85289): 9.3e-111
Smith-Waterman score: 1621; 100.0% identity (100.0% similar) in 238 aa overlap (1-238:1-238)
10 20 30 40 50 60
pF1KE1 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
130 140 150 160 170 180
190 200 210 220 230
pF1KE1 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA
190 200 210 220 230
>>XP_005253159 (OMIM: 602644) PREDICTED: tetraspanin-4 i (238 aa)
initn: 1621 init1: 1621 opt: 1621 Z-score: 2109.4 bits: 397.7 E(85289): 9.3e-111
Smith-Waterman score: 1621; 100.0% identity (100.0% similar) in 238 aa overlap (1-238:1-238)
10 20 30 40 50 60
pF1KE1 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
130 140 150 160 170 180
190 200 210 220 230
pF1KE1 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA
190 200 210 220 230
>>NP_003262 (OMIM: 602644) tetraspanin-4 isoform a [Homo (238 aa)
initn: 1621 init1: 1621 opt: 1621 Z-score: 2109.4 bits: 397.7 E(85289): 9.3e-111
Smith-Waterman score: 1621; 100.0% identity (100.0% similar) in 238 aa overlap (1-238:1-238)
10 20 30 40 50 60
pF1KE1 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
130 140 150 160 170 180
190 200 210 220 230
pF1KE1 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA
190 200 210 220 230
>>NP_001020407 (OMIM: 602644) tetraspanin-4 isoform a [H (238 aa)
initn: 1621 init1: 1621 opt: 1621 Z-score: 2109.4 bits: 397.7 E(85289): 9.3e-111
Smith-Waterman score: 1621; 100.0% identity (100.0% similar) in 238 aa overlap (1-238:1-238)
10 20 30 40 50 60
pF1KE1 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIIT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLH
130 140 150 160 170 180
190 200 210 220 230
pF1KE1 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVVKADTYCA
190 200 210 220 230
>>XP_011518638 (OMIM: 602644) PREDICTED: tetraspanin-4 i (269 aa)
initn: 1475 init1: 1475 opt: 1476 Z-score: 1920.3 bits: 362.9 E(85289): 3.2e-100
Smith-Waterman score: 1476; 97.8% identity (98.7% similar) in 223 aa overlap (19-238:47-269)
10 20 30 40
pF1KE1 MARACLQAVKYLMFAFNLLFW---LGGCGVLGVGIWLAATQGSFATLS
..: ::::::::::::::::::::::::
XP_011 GWGAWGFLGRTHHLPAHWSAFRDPEHRLVSFLWPAQLGGCGVLGVGIWLAATQGSFATLS
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE1 SSFPSLSAANLLIITGAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSFPSLSAANLLIITGAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFF
80 90 100 110 120 130
110 120 130 140 150 160
pF1KE1 AYTDKIDRYAQQDLKKGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AYTDKIDRYAQQDLKKGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRV
140 150 160 170 180 190
170 180 190 200 210 220
pF1KE1 PDSCCLEFSESCGLHAPGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDSCCLEFSESCGLHAPGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMT
200 210 220 230 240 250
230
pF1KE1 MYCQVVKADTYCA
:::::::::::::
XP_011 MYCQVVKADTYCA
260
>>XP_011518642 (OMIM: 602644) PREDICTED: tetraspanin-4 i (174 aa)
initn: 1203 init1: 1203 opt: 1203 Z-score: 1568.6 bits: 297.2 E(85289): 1.2e-80
Smith-Waterman score: 1203; 100.0% identity (100.0% similar) in 174 aa overlap (65-238:1-174)
40 50 60 70 80 90
pF1KE1 AATQGSFATLSSSFPSLSAANLLIITGAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVF
::::::::::::::::::::::::::::::
XP_011 MAIGFVGCLGAIKENKCLLLTFFLLLLLVF
10 20 30
100 110 120 130 140 150
pF1KE1 LLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYT
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE1 DWFEVYNATRVPDSCCLEFSESCGLHAPGTWWKAPCYETVKVWLQENLLAVGIFGLCTAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DWFEVYNATRVPDSCCLEFSESCGLHAPGTWWKAPCYETVKVWLQENLLAVGIFGLCTAL
100 110 120 130 140 150
220 230
pF1KE1 VQILGLTFAMTMYCQVVKADTYCA
::::::::::::::::::::::::
XP_011 VQILGLTFAMTMYCQVVKADTYCA
160 170
>>NP_001020410 (OMIM: 602644) tetraspanin-4 isoform b [H (174 aa)
initn: 1203 init1: 1203 opt: 1203 Z-score: 1568.6 bits: 297.2 E(85289): 1.2e-80
Smith-Waterman score: 1203; 100.0% identity (100.0% similar) in 174 aa overlap (65-238:1-174)
40 50 60 70 80 90
pF1KE1 AATQGSFATLSSSFPSLSAANLLIITGAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVF
::::::::::::::::::::::::::::::
NP_001 MAIGFVGCLGAIKENKCLLLTFFLLLLLVF
10 20 30
100 110 120 130 140 150
pF1KE1 LLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYT
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE1 DWFEVYNATRVPDSCCLEFSESCGLHAPGTWWKAPCYETVKVWLQENLLAVGIFGLCTAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DWFEVYNATRVPDSCCLEFSESCGLHAPGTWWKAPCYETVKVWLQENLLAVGIFGLCTAL
100 110 120 130 140 150
220 230
pF1KE1 VQILGLTFAMTMYCQVVKADTYCA
::::::::::::::::::::::::
NP_001 VQILGLTFAMTMYCQVVKADTYCA
160 170
238 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 15:16:53 2016 done: Sun Nov 6 15:16:54 2016
Total Scan time: 5.630 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]