FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1717, 223 aa
  1>>>pF1KE1717 223 - 223 aa - 223 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4589+/-0.00073; mu= 12.3601+/- 0.044
 mean_var=56.7306+/-11.486, 0's: 0 Z-trim(107.9): 16  B-trim: 550 in 1/51
 Lambda= 0.170281
 statistics sampled from 9856 (9863) to 9856 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.694), E-opt: 0.2 (0.303), width:  16
 Scan time:  2.060

The best scores are:                                      opt bits E(32554)
CCDS35160.1 NTMT1 gene_id:28989|Hs108|chr9         ( 223) 1513 379.6 8.9e-106
CCDS75918.1 NTMT1 gene_id:28989|Hs108|chr9         ( 135)  921 234.1 3.4e-62
CCDS44275.1 METTL11B gene_id:149281|Hs108|chr1     ( 283)  810 206.9 1.1e-53
CCDS69682.1 NTMT1 gene_id:28989|Hs108|chr9         ( 145)  731 187.4 4.1e-48


>>CCDS35160.1 NTMT1 gene_id:28989|Hs108|chr9              (223 aa)
 initn: 1513 init1: 1513 opt: 1513  Z-score: 2012.5  bits: 379.6 E(32554): 8.9e-106
Smith-Waterman score: 1513; 100.0% identity (100.0% similar) in 223 aa overlap (1-223:1-223)

               10        20        30        40        50        60
pF1KE1 MTSEVIEDEKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPNKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MTSEVIEDEKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPNKT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVD
              130       140       150       160       170       180

              190       200       210       220   
pF1KE1 SSVCRDLDVVRRIICSAGLSLLAEERQENLPDEIYHVYSFALR
       :::::::::::::::::::::::::::::::::::::::::::
CCDS35 SSVCRDLDVVRRIICSAGLSLLAEERQENLPDEIYHVYSFALR
              190       200       210       220   

>>CCDS75918.1 NTMT1 gene_id:28989|Hs108|chr9              (135 aa)
 initn: 921 init1: 921 opt: 921  Z-score: 1230.1  bits: 234.1 E(32554): 3.4e-62
Smith-Waterman score: 921; 100.0% identity (100.0% similar) in 135 aa overlap (89-223:1-135)

       60        70        80        90       100       110        
pF1KE1 KTGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCG
                                     ::::::::::::::::::::::::::::::
CCDS75                               MVDITEDFLVQAKTYLGEEGKRVRNYFCCG
                                             10        20        30

      120       130       140       150       160       170        
pF1KE1 LQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDD
               40        50        60        70        80        90

      180       190       200       210       220   
pF1KE1 VDSSVCRDLDVVRRIICSAGLSLLAEERQENLPDEIYHVYSFALR
       :::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VDSSVCRDLDVVRRIICSAGLSLLAEERQENLPDEIYHVYSFALR
              100       110       120       130     

>>CCDS44275.1 METTL11B gene_id:149281|Hs108|chr1          (283 aa)
 initn: 811 init1: 646 opt: 810  Z-score: 1077.4  bits: 206.9 E(32554): 1.1e-53
Smith-Waterman score: 810; 50.9% identity (82.4% similar) in 222 aa overlap (1-222:57-277)

                                             10        20        30
pF1KE1                               MTSEVIEDEKQFYSKAKTYWKQIPPTVDGM
                                     .::.::. : :::..:: .....: : .::
CCDS44 SFILHKAIRNDFFQSYLYLLEKIPLVKLYALTSQVINGEMQFYARAKLFYQEVPATEEGM
         30        40        50        60        70        80      

               40        50        60        70        80        90
pF1KE1 LGGYGHISSIDINSSRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPLFREVDMV
       .:.. ..:: ::..:.:::..:.  ::...::.::::::.::::..:..:::.:  :..:
CCDS44 MGNFIELSSPDIQASQKFLRKFVG-GPGRAGTDCALDCGSGIGRVSKHVLLPVFNSVELV
         90       100       110        120       130       140     

              100       110       120       130       140       150
pF1KE1 DITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFL
       :. :.::..:..::  .: .:..: : .::.:::    ::::::::: :::::. :  ::
CCDS44 DMMESFLLEAQNYLQVKGDKVESYHCYSLQEFTPPFRRYDVIWIQWVSGHLTDKDLLAFL
         150       160       170       180       190       200     

              160       170       180       190       200       210
pF1KE1 RRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQENL
        ::. .:. ::::..:::.:.:: :::  :::: ::.:..: .: ..:: .:..:.:...
CCDS44 SRCRDGLKENGIIILKDNVAREGCILDLSDSSVTRDMDILRSLIRKSGLVVLGQEKQDGF
         210       220       230       240       250       260     

              220        
pF1KE1 PDEIYHVYSFALR     
       :..   :. :::      
CCDS44 PEQCIPVWMFALHSDRHS
         270       280   

>>CCDS69682.1 NTMT1 gene_id:28989|Hs108|chr9              (145 aa)
 initn: 731 init1: 731 opt: 731  Z-score: 977.4  bits: 187.4 E(32554): 4.1e-48
Smith-Waterman score: 731; 100.0% identity (100.0% similar) in 110 aa overlap (1-110:1-110)

               10        20        30        40        50        60
pF1KE1 MTSEVIEDEKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPNKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 MTSEVIEDEKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPNKT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::          
CCDS69 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRATSPISTWPS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVD
                                                                   
CCDS69 SCGAARAASAPTASSSSKTTWPRRA                                   
              130       140                                        




223 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 11:15:00 2016 done: Sun Nov  6 11:15:00 2016
 Total Scan time:  2.060 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]