FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1705, 209 aa
  1>>>pF1KE1705 209 - 209 aa - 209 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2435+/-0.000858; mu= 13.6692+/- 0.052
 mean_var=58.2952+/-11.595, 0's: 0 Z-trim(105.3): 30  B-trim: 20 in 1/48
 Lambda= 0.167980
 statistics sampled from 8319 (8334) to 8319 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.643), E-opt: 0.2 (0.256), width:  16
 Scan time:  1.990

The best scores are:                                      opt bits E(32554)
CCDS33320.1 METTL5 gene_id:29081|Hs108|chr2        ( 209) 1377 341.8 1.8e-94


>>CCDS33320.1 METTL5 gene_id:29081|Hs108|chr2             (209 aa)
 initn: 1377 init1: 1377 opt: 1377  Z-score: 1809.5  bits: 341.8 E(32554): 1.8e-94
Smith-Waterman score: 1377; 100.0% identity (100.0% similar) in 209 aa overlap (1-209:1-209)

               10        20        30        40        50        60
pF1KE1 MKKVRLKELESRLQQVDGFEKPKLLLEQYPTRPHIAACMLYTIHNTYDDIENKVVADLGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MKKVRLKELESRLQQVDGFEKPKLLLEQYPTRPHIAACMLYTIHNTYDDIENKVVADLGC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 GCGVLSIGTAMLGAGLCVGFDIDEDALEIFNRNAEEFELTNIDMVQCDVCLLSNRMSKSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GCGVLSIGTAMLGAGLCVGFDIDEDALEIFNRNAEEFELTNIDMVQCDVCLLSNRMSKSF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DTVIMNPPFGTKNNKGTDMAFLKTALEMARTAVYSLHKSSTREHVQKKAAEWKIKIDIIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 DTVIMNPPFGTKNNKGTDMAFLKTALEMARTAVYSLHKSSTREHVQKKAAEWKIKIDIIA
              130       140       150       160       170       180

              190       200         
pF1KE1 ELRYDLPASYKFHKKKSVDIEVDLIRFSF
       :::::::::::::::::::::::::::::
CCDS33 ELRYDLPASYKFHKKKSVDIEVDLIRFSF
              190       200         




209 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 12:07:11 2016 done: Sun Nov  6 12:07:12 2016
 Total Scan time:  1.990 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]