Result of FASTA (omim) for
pFN21AE1682
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1682, 196 aa
1>>>pF1KE1682 196 - 196 aa - 196 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7167+/-0.000315; mu= 16.8628+/- 0.020
mean_var=67.2271+/-13.838, 0's: 0 Z-trim(116.3): 23 B-trim: 1607 in 1/53
Lambda= 0.156424
statistics sampled from 27319 (27342) to 27319 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.711), E-opt: 0.2 (0.321), width: 16
Scan time: 5.970
The best scores are: opt bits E(85289)
NP_005082 (OMIM: 604963) peptidoglycan recognition ( 196) 1391 322.2 3.4e-88
XP_011508095 (OMIM: 608198) PREDICTED: peptidoglyc ( 205) 552 132.9 3.5e-31
XP_011508093 (OMIM: 608198) PREDICTED: peptidoglyc ( 369) 552 133.1 5.3e-31
XP_011508091 (OMIM: 608198) PREDICTED: peptidoglyc ( 373) 552 133.1 5.4e-31
NP_065126 (OMIM: 608198) peptidoglycan recognition ( 373) 552 133.1 5.4e-31
XP_011508092 (OMIM: 608198) PREDICTED: peptidoglyc ( 373) 552 133.1 5.4e-31
NP_443122 (OMIM: 608199) N-acetylmuramoyl-L-alanin ( 576) 470 114.8 2.8e-25
XP_006722696 (OMIM: 608199) PREDICTED: N-acetylmur ( 634) 470 114.8 3e-25
XP_011507421 (OMIM: 608197) PREDICTED: peptidoglyc ( 341) 420 103.3 4.7e-22
NP_443123 (OMIM: 608197) peptidoglycan recognition ( 341) 420 103.3 4.7e-22
XP_011507420 (OMIM: 608197) PREDICTED: peptidoglyc ( 377) 418 102.9 6.9e-22
XP_011507422 (OMIM: 608197) PREDICTED: peptidoglyc ( 339) 416 102.4 8.7e-22
XP_011508094 (OMIM: 608198) PREDICTED: peptidoglyc ( 340) 350 87.5 2.6e-17
>>NP_005082 (OMIM: 604963) peptidoglycan recognition pro (196 aa)
initn: 1391 init1: 1391 opt: 1391 Z-score: 1704.4 bits: 322.2 E(85289): 3.4e-88
Smith-Waterman score: 1391; 100.0% identity (100.0% similar) in 196 aa overlap (1-196:1-196)
10 20 30 40 50 60
pF1KE1 MSRRSMLLAWALPSLLRLGAAQETEDPACCSPIVPRNEWKALASECAQHLSLPLRYVVVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MSRRSMLLAWALPSLLRLGAAQETEDPACCSPIVPRNEWKALASECAQHLSLPLRYVVVS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 HTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 HTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSGH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGALRSNYVLKGHRDVQRTLSPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGALRSNYVLKGHRDVQRTLSPG
130 140 150 160 170 180
190
pF1KE1 NQLYHLIQNWPHYRSP
::::::::::::::::
NP_005 NQLYHLIQNWPHYRSP
190
>>XP_011508095 (OMIM: 608198) PREDICTED: peptidoglycan r (205 aa)
initn: 518 init1: 253 opt: 552 Z-score: 680.9 bits: 132.9 E(85289): 3.5e-31
Smith-Waterman score: 552; 41.8% identity (69.5% similar) in 177 aa overlap (18-194:30-204)
10 20 30 40
pF1KE1 MSRRSMLLAWALPSLLRLGAAQETEDPACCSPIVPRNEWKALASECAQ
:. :.: : .:::. : : ..: .
XP_011 MENLITYAVQKGHLSSSYVQPLLGKGENCLAPRQKTSLKKACPGVVPRSVWGARETHCPR
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 HLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEG
..:: .: .. :::: .:: :. .:..: ... : ::.:::::.:.:: .:::
XP_011 -MTLPAKYGIIIHTAGRTCNISDECRLLVRDIQSFYIDRLKSCDIGYNFLVGQDGAIYEG
70 80 90 100 110
110 120 130 140 150 160
pF1KE1 RGWNFTGAHSGHLWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGALRSNYVLK
::: :. : .. ...::.:::.. :. :..::: :. :....: : ::.:
XP_011 VGWNVQGS-STPGYDDIALGITFMGTFTGIPPNAAALEAAQDLIQCAMVKGYLTPNYLLV
120 130 140 150 160 170
170 180 190
pF1KE1 GHRDVQRTLSPGNQLYHLIQNWPHYRSP
:: :: ::::::. ::..:..:::..
XP_011 GHSDVARTLSPGQALYNIISTWPHFKH
180 190 200
>>XP_011508093 (OMIM: 608198) PREDICTED: peptidoglycan r (369 aa)
initn: 483 init1: 253 opt: 552 Z-score: 677.5 bits: 133.1 E(85289): 5.3e-31
Smith-Waterman score: 552; 41.8% identity (69.5% similar) in 177 aa overlap (18-194:194-368)
10 20 30 40
pF1KE1 MSRRSMLLAWALPSLLRLGAAQETEDPACCSPIVPRNEWKALASECA
:. :.: : .:::. : : ..:
XP_011 AMENLITYAVQKGHLSSSYVQPLLGKGENCLAPRQKTSLKKACPGVVPRSVWGARETHCP
170 180 190 200 210 220
50 60 70 80 90 100
pF1KE1 QHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYE
. ..:: .: .. :::: .:: :. .:..: ... : ::.:::::.:.:: .::
XP_011 R-MTLPAKYGIIIHTAGRTCNISDECRLLVRDIQSFYIDRLKSCDIGYNFLVGQDGAIYE
230 240 250 260 270 280
110 120 130 140 150 160
pF1KE1 GRGWNFTGAHSGHLWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGALRSNYVL
: ::: :. : .. ...::.:::.. :. :..::: :. :....: : ::.:
XP_011 GVGWNVQGS-STPGYDDIALGITFMGTFTGIPPNAAALEAAQDLIQCAMVKGYLTPNYLL
290 300 310 320 330 340
170 180 190
pF1KE1 KGHRDVQRTLSPGNQLYHLIQNWPHYRSP
:: :: ::::::. ::..:..:::..
XP_011 VGHSDVARTLSPGQALYNIISTWPHFKH
350 360
>--
initn: 190 init1: 154 opt: 370 Z-score: 455.6 bits: 92.0 E(85289): 1.2e-18
Smith-Waterman score: 370; 39.0% identity (70.6% similar) in 136 aa overlap (31-166:49-183)
10 20 30 40 50 60
pF1KE1 MSRRSMLLAWALPSLLRLGAAQETEDPACCSPIVPRNEWKALASECAQHLSLPLRYVVVS
: : :. : : : :. .:. :. .:.
XP_011 SSWNKTQAKQVSEGLQYLFENISQLTEKDVSTTVSRKAWGAEAVGCSIQLTTPVNVLVIH
20 30 40 50 60 70
70 80 90 100 110 120
pF1KE1 HTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSGH
:. : :. . :.:. :..: .:... . :::.::::.:.:: :::: :::. :.:. .
XP_011 HVPGLECHDQTVCSQRLRELQAHHVHNNSGCDVAYNFLVGDDGRVYEGVGWNIQGVHT-Q
80 90 100 110 120 130
130 140 150 160 170 180
pF1KE1 LWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGALRSNYVLKGHRDVQRTLSPG
.: .:.:..:.:. . :.: :. : ..:.. .: .: : :.::
XP_011 GYNNISLGFAFFGTKKGHSPSPAALSAMENLITYAVQKGHLSSSYVQPLLGKGENCLAPR
140 150 160 170 180 190
190
pF1KE1 NQLYHLIQNWPHYRSP
XP_011 QKTSLKKACPGVVPRSVWGARETHCPRMTLPAKYGIIIHTAGRTCNISDECRLLVRDIQS
200 210 220 230 240 250
>>XP_011508091 (OMIM: 608198) PREDICTED: peptidoglycan r (373 aa)
initn: 483 init1: 253 opt: 552 Z-score: 677.5 bits: 133.1 E(85289): 5.4e-31
Smith-Waterman score: 552; 41.8% identity (69.5% similar) in 177 aa overlap (18-194:198-372)
10 20 30 40
pF1KE1 MSRRSMLLAWALPSLLRLGAAQETEDPACCSPIVPRNEWKALASECA
:. :.: : .:::. : : ..:
XP_011 AMENLITYAVQKGHLSSSYVQPLLGKGENCLAPRQKTSLKKACPGVVPRSVWGARETHCP
170 180 190 200 210 220
50 60 70 80 90 100
pF1KE1 QHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYE
. ..:: .: .. :::: .:: :. .:..: ... : ::.:::::.:.:: .::
XP_011 R-MTLPAKYGIIIHTAGRTCNISDECRLLVRDIQSFYIDRLKSCDIGYNFLVGQDGAIYE
230 240 250 260 270 280
110 120 130 140 150 160
pF1KE1 GRGWNFTGAHSGHLWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGALRSNYVL
: ::: :. : .. ...::.:::.. :. :..::: :. :....: : ::.:
XP_011 GVGWNVQGS-STPGYDDIALGITFMGTFTGIPPNAAALEAAQDLIQCAMVKGYLTPNYLL
290 300 310 320 330 340
170 180 190
pF1KE1 KGHRDVQRTLSPGNQLYHLIQNWPHYRSP
:: :: ::::::. ::..:..:::..
XP_011 VGHSDVARTLSPGQALYNIISTWPHFKH
350 360 370
>--
initn: 190 init1: 154 opt: 376 Z-score: 462.8 bits: 93.4 E(85289): 4.9e-19
Smith-Waterman score: 376; 38.5% identity (68.9% similar) in 148 aa overlap (21-166:41-187)
10 20 30 40
pF1KE1 MSRRSMLLAWALPSLLRLGAAQETED--PACCSPIVPRNEWKALASECAQ
.: :: :. : : :. : : : :.
XP_011 LGIQAWGDSSWNKTQAKQVSEGLQYLFENISQLTEKGLPTDVSTTVSRKAWGAEAVGCSI
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE1 HLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEG
.:. :. .:. :. : :. . :.:. :..: .:... . :::.::::.:.:: ::::
XP_011 QLTTPVNVLVIHHVPGLECHDQTVCSQRLRELQAHHVHNNSGCDVAYNFLVGDDGRVYEG
80 90 100 110 120 130
110 120 130 140 150 160
pF1KE1 RGWNFTGAHSGHLWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGALRSNYVLK
:::. :.:. . .: .:.:..:.:. . :.: :. : ..:.. .: .: : :.::
XP_011 VGWNIQGVHT-QGYNNISLGFAFFGTKKGHSPSPAALSAMENLITYAVQKGHLSSSYVQP
140 150 160 170 180
170 180 190
pF1KE1 GHRDVQRTLSPGNQLYHLIQNWPHYRSP
XP_011 LLGKGENCLAPRQKTSLKKACPGVVPRSVWGARETHCPRMTLPAKYGIIIHTAGRTCNIS
190 200 210 220 230 240
>>NP_065126 (OMIM: 608198) peptidoglycan recognition pro (373 aa)
initn: 483 init1: 253 opt: 552 Z-score: 677.5 bits: 133.1 E(85289): 5.4e-31
Smith-Waterman score: 552; 41.8% identity (69.5% similar) in 177 aa overlap (18-194:198-372)
10 20 30 40
pF1KE1 MSRRSMLLAWALPSLLRLGAAQETEDPACCSPIVPRNEWKALASECA
:. :.: : .:::. : : ..:
NP_065 AMENLITYAVQKGHLSSSYVQPLLGKGENCLAPRQKTSLKKACPGVVPRSVWGARETHCP
170 180 190 200 210 220
50 60 70 80 90 100
pF1KE1 QHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYE
. ..:: .: .. :::: .:: :. .:..: ... : ::.:::::.:.:: .::
NP_065 R-MTLPAKYGIIIHTAGRTCNISDECRLLVRDIQSFYIDRLKSCDIGYNFLVGQDGAIYE
230 240 250 260 270 280
110 120 130 140 150 160
pF1KE1 GRGWNFTGAHSGHLWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGALRSNYVL
: ::: :. : .. ...::.:::.. :. :..::: :. :....: : ::.:
NP_065 GVGWNVQGS-STPGYDDIALGITFMGTFTGIPPNAAALEAAQDLIQCAMVKGYLTPNYLL
290 300 310 320 330 340
170 180 190
pF1KE1 KGHRDVQRTLSPGNQLYHLIQNWPHYRSP
:: :: ::::::. ::..:..:::..
NP_065 VGHSDVARTLSPGQALYNIISTWPHFKH
350 360 370
>--
initn: 190 init1: 154 opt: 376 Z-score: 462.8 bits: 93.4 E(85289): 4.9e-19
Smith-Waterman score: 376; 38.5% identity (68.9% similar) in 148 aa overlap (21-166:41-187)
10 20 30 40
pF1KE1 MSRRSMLLAWALPSLLRLGAAQETED--PACCSPIVPRNEWKALASECAQ
.: :: :. : : :. : : : :.
NP_065 LGIQAWGDSSWNKTQAKQVSEGLQYLFENISQLTEKGLPTDVSTTVSRKAWGAEAVGCSI
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE1 HLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEG
.:. :. .:. :. : :. . :.:. :..: .:... . :::.::::.:.:: ::::
NP_065 QLTTPVNVLVIHHVPGLECHDQTVCSQRLRELQAHHVHNNSGCDVAYNFLVGDDGRVYEG
80 90 100 110 120 130
110 120 130 140 150 160
pF1KE1 RGWNFTGAHSGHLWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGALRSNYVLK
:::. :.:. . .: .:.:..:.:. . :.: :. : ..:.. .: .: : :.::
NP_065 VGWNIQGVHT-QGYNNISLGFAFFGTKKGHSPSPAALSAMENLITYAVQKGHLSSSYVQP
140 150 160 170 180
170 180 190
pF1KE1 GHRDVQRTLSPGNQLYHLIQNWPHYRSP
NP_065 LLGKGENCLAPRQKTSLKKACPGVVPRSVWGARETHCPRMTLPAKYGIIIHTAGRTCNIS
190 200 210 220 230 240
>>XP_011508092 (OMIM: 608198) PREDICTED: peptidoglycan r (373 aa)
initn: 483 init1: 253 opt: 552 Z-score: 677.5 bits: 133.1 E(85289): 5.4e-31
Smith-Waterman score: 552; 41.8% identity (69.5% similar) in 177 aa overlap (18-194:198-372)
10 20 30 40
pF1KE1 MSRRSMLLAWALPSLLRLGAAQETEDPACCSPIVPRNEWKALASECA
:. :.: : .:::. : : ..:
XP_011 AMENLITYAVQKGHLSSSYVQPLLGKGENCLAPRQKTSLKKACPGVVPRSVWGARETHCP
170 180 190 200 210 220
50 60 70 80 90 100
pF1KE1 QHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYE
. ..:: .: .. :::: .:: :. .:..: ... : ::.:::::.:.:: .::
XP_011 R-MTLPAKYGIIIHTAGRTCNISDECRLLVRDIQSFYIDRLKSCDIGYNFLVGQDGAIYE
230 240 250 260 270 280
110 120 130 140 150 160
pF1KE1 GRGWNFTGAHSGHLWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGALRSNYVL
: ::: :. : .. ...::.:::.. :. :..::: :. :....: : ::.:
XP_011 GVGWNVQGS-STPGYDDIALGITFMGTFTGIPPNAAALEAAQDLIQCAMVKGYLTPNYLL
290 300 310 320 330 340
170 180 190
pF1KE1 KGHRDVQRTLSPGNQLYHLIQNWPHYRSP
:: :: ::::::. ::..:..:::..
XP_011 VGHSDVARTLSPGQALYNIISTWPHFKH
350 360 370
>--
initn: 190 init1: 154 opt: 376 Z-score: 462.8 bits: 93.4 E(85289): 4.9e-19
Smith-Waterman score: 376; 38.5% identity (68.9% similar) in 148 aa overlap (21-166:41-187)
10 20 30 40
pF1KE1 MSRRSMLLAWALPSLLRLGAAQETED--PACCSPIVPRNEWKALASECAQ
.: :: :. : : :. : : : :.
XP_011 LGIQAWGDSSWNKTQAKQVSEGLQYLFENISQLTEKGLPTDVSTTVSRKAWGAEAVGCSI
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE1 HLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEG
.:. :. .:. :. : :. . :.:. :..: .:... . :::.::::.:.:: ::::
XP_011 QLTTPVNVLVIHHVPGLECHDQTVCSQRLRELQAHHVHNNSGCDVAYNFLVGDDGRVYEG
80 90 100 110 120 130
110 120 130 140 150 160
pF1KE1 RGWNFTGAHSGHLWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGALRSNYVLK
:::. :.:. . .: .:.:..:.:. . :.: :. : ..:.. .: .: : :.::
XP_011 VGWNIQGVHT-QGYNNISLGFAFFGTKKGHSPSPAALSAMENLITYAVQKGHLSSSYVQP
140 150 160 170 180
170 180 190
pF1KE1 GHRDVQRTLSPGNQLYHLIQNWPHYRSP
XP_011 LLGKGENCLAPRQKTSLKKACPGVVPRSVWGARETHCPRMTLPAKYGIIIHTAGRTCNIS
190 200 210 220 230 240
>>NP_443122 (OMIM: 608199) N-acetylmuramoyl-L-alanine am (576 aa)
initn: 379 init1: 312 opt: 470 Z-score: 575.0 bits: 114.8 E(85289): 2.8e-25
Smith-Waterman score: 470; 41.1% identity (67.2% similar) in 180 aa overlap (20-193:368-545)
10 20 30 40
pF1KE1 MSRRSMLLAWALPSLLRLGAAQE-TEDPACCSPIVPRNEWKALASEC-A
:..: :: : : :: .: : .
NP_443 GTLVLLQRLEPVHLQLQCMSQEQLAQVAANATKEFTEAFLGCPAIHPRCRWGAAPYRGRP
340 350 360 370 380 390
50 60 70 80 90 100
pF1KE1 QHLSLPLRYVVVSHT--AGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLV
. :.::: .. : :: . :. . : . :..:.::. : :: :.::.:..: :: :
NP_443 KLLQLPLGFLYVHHTYVPAPPCTDFTRCAANMRSMQRYHQDTQGWGDIGYSFVVGSDGYV
400 410 420 430 440 450
110 120 130 140 150 160
pF1KE1 YEGRGWNFTGAHS-GHLWNPMSIGISFMGNYMDRVPTPQAIRAAQGLL-ACGVAQGALRS
::::::...:::. :: : ..:....::: .:: :.:... : .:.: : ::
NP_443 YEGRGWHWVGAHTLGH--NSRGFGVAIVGNYTAALPTEAALRTVRDTLPSCAVRAGLLRP
460 470 480 490 500 510
170 180 190
pF1KE1 NYVLKGHRDVQRTLSPGNQLYHLIQNWPHYRSP
.:.: :::.. :: ::. :. :...:::.
NP_443 DYALLGHRQLVRTDCPGDALFDLLRTWPHFTATVKPRPARSVSKRSRREPPPRTLPATDL
520 530 540 550 560 570
>>XP_006722696 (OMIM: 608199) PREDICTED: N-acetylmuramoy (634 aa)
initn: 379 init1: 312 opt: 470 Z-score: 574.4 bits: 114.8 E(85289): 3e-25
Smith-Waterman score: 470; 41.1% identity (67.2% similar) in 180 aa overlap (20-193:368-545)
10 20 30 40
pF1KE1 MSRRSMLLAWALPSLLRLGAAQE-TEDPACCSPIVPRNEWKALASEC-A
:..: :: : : :: .: : .
XP_006 GTLVLLQRLEPVHLQLQCMSQEQLAQVAANATKEFTEAFLGCPAIHPRCRWGAAPYRGRP
340 350 360 370 380 390
50 60 70 80 90 100
pF1KE1 QHLSLPLRYVVVSHT--AGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLV
. :.::: .. : :: . :. . : . :..:.::. : :: :.::.:..: :: :
XP_006 KLLQLPLGFLYVHHTYVPAPPCTDFTRCAANMRSMQRYHQDTQGWGDIGYSFVVGSDGYV
400 410 420 430 440 450
110 120 130 140 150 160
pF1KE1 YEGRGWNFTGAHS-GHLWNPMSIGISFMGNYMDRVPTPQAIRAAQGLL-ACGVAQGALRS
::::::...:::. :: : ..:....::: .:: :.:... : .:.: : ::
XP_006 YEGRGWHWVGAHTLGH--NSRGFGVAIVGNYTAALPTEAALRTVRDTLPSCAVRAGLLRP
460 470 480 490 500 510
170 180 190
pF1KE1 NYVLKGHRDVQRTLSPGNQLYHLIQNWPHYRSP
.:.: :::.. :: ::. :. :...:::.
XP_006 DYALLGHRQLVRTDCPGDALFDLLRTWPHFTAVSLRSLHYTARRPSVYTSSTRPLPPACN
520 530 540 550 560 570
>>XP_011507421 (OMIM: 608197) PREDICTED: peptidoglycan r (341 aa)
initn: 624 init1: 305 opt: 420 Z-score: 517.0 bits: 103.3 E(85289): 4.7e-22
Smith-Waterman score: 582; 41.4% identity (73.7% similar) in 186 aa overlap (13-194:157-340)
10 20 30
pF1KE1 MSRRSMLLAWALPSLLRLGAAQETEDPA----CCSPIVPRNE
: ::. . . . :. : :. :.
XP_011 SSPSPAALSAAEGLISYAIQKGHLSPRYIQPLLLKEETCLDPQHPVMPRKVCPNIIKRSA
130 140 150 160 170 180
40 50 60 70 80 90
pF1KE1 WKALASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFL
:.: ..: . ..:: .::.. ::::.::.. ..:: .::.: .:: : ..::.::.::
XP_011 WEARETHCPK-MNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFCDIGYHFL
190 200 210 220 230 240
100 110 120 130 140 150
pF1KE1 IGEDGLVYEGRGWNFTGAHSGHLWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQ
.:.:: :::: ::.. :.:. . .: ...::.:.: .... :. :..::: :. :.:..
XP_011 VGQDGGVYEGVGWHIQGSHT-YGFNDIALGIAFIGYFVEKPPNAAALEAAQDLIQCAVVE
250 260 270 280 290 300
160 170 180 190
pF1KE1 GALRSNYVLKGHRDVQRTLSPGNQLYHLIQNWPHYRSP
: : ::.: :: :: ::::. ::..:..:::..
XP_011 GYLTPNYLLMGHSDVVNILSPGQALYNIISTWPHFKH
310 320 330 340
>--
initn: 631 init1: 305 opt: 420 Z-score: 517.0 bits: 103.3 E(85289): 4.7e-22
Smith-Waterman score: 420; 39.6% identity (66.7% similar) in 159 aa overlap (8-166:4-155)
10 20 30 40 50 60
pF1KE1 MSRRSMLLAWALPSLLRLGAAQETEDPACCSPIVPRNEWKALASECAQHLSLPLRYVVVS
: : : .. :: : . :. :: :.:: : : :.::. :....
XP_011 MGTLPWLLAFFI-LGL-QAWDTPT----IVSRKEWGARPLACRALLTLPVAYIITD
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 HTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSGH
. : .:. . :.:. :..: . . :.:::::.::::.:.:: :::: :::. : :. .
XP_011 QLPGMQCQQQSVCSQMLRGLQSHSVYTIGWCDVAYNFLVGDDGRVYEGVGWNIQGLHT-Q
60 70 80 90 100
130 140 150 160 170 180
pF1KE1 LWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGALRSNYVLKGHRDVQRTLSPG
.: .:.::.:.:: . :.: :. ::.::.. .. .: : :.
XP_011 GYNNISLGIAFFGNKIGSSPSPAALSAAEGLISYAIQKGHLSPRYIQPLLLKEETCLDPQ
110 120 130 140 150 160
190
pF1KE1 NQLYHLIQNWPHYRSP
XP_011 HPVMPRKVCPNIIKRSAWEARETHCPKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQS
170 180 190 200 210 220
>>NP_443123 (OMIM: 608197) peptidoglycan recognition pro (341 aa)
initn: 624 init1: 305 opt: 420 Z-score: 517.0 bits: 103.3 E(85289): 4.7e-22
Smith-Waterman score: 582; 41.4% identity (73.7% similar) in 186 aa overlap (13-194:157-340)
10 20 30
pF1KE1 MSRRSMLLAWALPSLLRLGAAQETEDPA----CCSPIVPRNE
: ::. . . . :. : :. :.
NP_443 SSPSPAALSAAEGLISYAIQKGHLSPRYIQPLLLKEETCLDPQHPVMPRKVCPNIIKRSA
130 140 150 160 170 180
40 50 60 70 80 90
pF1KE1 WKALASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFL
:.: ..: . ..:: .::.. ::::.::.. ..:: .::.: .:: : ..::.::.::
NP_443 WEARETHCPK-MNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFCDIGYHFL
190 200 210 220 230 240
100 110 120 130 140 150
pF1KE1 IGEDGLVYEGRGWNFTGAHSGHLWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQ
.:.:: :::: ::.. :.:. . .: ...::.:.: .... :. :..::: :. :.:..
NP_443 VGQDGGVYEGVGWHIQGSHT-YGFNDIALGIAFIGYFVEKPPNAAALEAAQDLIQCAVVE
250 260 270 280 290 300
160 170 180 190
pF1KE1 GALRSNYVLKGHRDVQRTLSPGNQLYHLIQNWPHYRSP
: : ::.: :: :: ::::. ::..:..:::..
NP_443 GYLTPNYLLMGHSDVVNILSPGQALYNIISTWPHFKH
310 320 330 340
>--
initn: 631 init1: 305 opt: 420 Z-score: 517.0 bits: 103.3 E(85289): 4.7e-22
Smith-Waterman score: 420; 39.6% identity (66.7% similar) in 159 aa overlap (8-166:4-155)
10 20 30 40 50 60
pF1KE1 MSRRSMLLAWALPSLLRLGAAQETEDPACCSPIVPRNEWKALASECAQHLSLPLRYVVVS
: : : .. :: : . :. :: :.:: : : :.::. :....
NP_443 MGTLPWLLAFFI-LGL-QAWDTPT----IVSRKEWGARPLACRALLTLPVAYIITD
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 HTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSGH
. : .:. . :.:. :..: . . :.:::::.::::.:.:: :::: :::. : :. .
NP_443 QLPGMQCQQQSVCSQMLRGLQSHSVYTIGWCDVAYNFLVGDDGRVYEGVGWNIQGLHT-Q
60 70 80 90 100
130 140 150 160 170 180
pF1KE1 LWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGALRSNYVLKGHRDVQRTLSPG
.: .:.::.:.:: . :.: :. ::.::.. .. .: : :.
NP_443 GYNNISLGIAFFGNKIGSSPSPAALSAAEGLISYAIQKGHLSPRYIQPLLLKEETCLDPQ
110 120 130 140 150 160
190
pF1KE1 NQLYHLIQNWPHYRSP
NP_443 HPVMPRKVCPNIIKRSAWEARETHCPKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQS
170 180 190 200 210 220
196 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 13:20:43 2016 done: Sun Nov 6 13:20:44 2016
Total Scan time: 5.970 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]