Result of FASTA (ccds) for
pFN21AE1636
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1636, 152 aa
1>>>pF1KE1636 152 - 152 aa - 152 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6756+/-0.00056; mu= 15.5154+/- 0.034
mean_var=57.2449+/-11.156, 0's: 0 Z-trim(111.7): 21 B-trim: 0 in 0/54
Lambda= 0.169514
statistics sampled from 12537 (12558) to 12537 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.772), E-opt: 0.2 (0.386), width: 16
Scan time: 1.830
The best scores are: opt bits E(32554)
CCDS2112.1 IL1F10 gene_id:84639|Hs108|chr2 ( 152) 1041 261.7 1.2e-70
CCDS2111.1 IL36RN gene_id:26525|Hs108|chr2 ( 155) 371 97.9 2.6e-21
CCDS2115.1 IL1RN gene_id:3557|Hs108|chr2 ( 143) 312 83.4 5.4e-17
CCDS2113.1 IL1RN gene_id:3557|Hs108|chr2 ( 159) 312 83.5 5.8e-17
CCDS46396.1 IL1RN gene_id:3557|Hs108|chr2 ( 177) 312 83.5 6.4e-17
CCDS2114.1 IL1RN gene_id:3557|Hs108|chr2 ( 180) 312 83.5 6.4e-17
CCDS2108.1 IL36G gene_id:56300|Hs108|chr2 ( 169) 235 64.7 2.9e-11
CCDS2110.1 IL36B gene_id:27177|Hs108|chr2 ( 157) 234 64.4 3.2e-11
CCDS42734.1 IL36A gene_id:27179|Hs108|chr2 ( 158) 232 63.9 4.5e-11
>>CCDS2112.1 IL1F10 gene_id:84639|Hs108|chr2 (152 aa)
initn: 1041 init1: 1041 opt: 1041 Z-score: 1381.8 bits: 261.7 E(32554): 1.2e-70
Smith-Waterman score: 1041; 98.7% identity (98.7% similar) in 152 aa overlap (1-152:1-152)
10 20 30 40 50 60
pF1KE1 MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCCAEKICTLPNRGLDRTKVPIFLG
::::::::::::::::::::::::::::::::::::::::::: :::::: :::::::::
CCDS21 MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCCAEKICILPNRGLARTKVPIFLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 IQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 IQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGW
70 80 90 100 110 120
130 140 150
pF1KE1 FLCGPAEPQQPVQLTKESEPSARTKFYFEQSW
::::::::::::::::::::::::::::::::
CCDS21 FLCGPAEPQQPVQLTKESEPSARTKFYFEQSW
130 140 150
>>CCDS2111.1 IL36RN gene_id:26525|Hs108|chr2 (155 aa)
initn: 348 init1: 210 opt: 371 Z-score: 496.1 bits: 97.9 E(32554): 2.6e-21
Smith-Waterman score: 371; 44.4% identity (69.4% similar) in 144 aa overlap (12-150:11-153)
10 20 30 40 50
pF1KE1 MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCC-AEKICTLPNRGLDRTKVPIFL
.: . :.:: ...:::.: : . .:.: ..::: :: . :..:
CCDS21 MVLSGALCFRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSPVIL
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 GIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPG
:.::::.::.: .: :.: :: ::: ::: :..:. :::.. . : . .:.::.::
CCDS21 GVQGGSQCLSCGVGQE-PTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPG
60 70 80 90 100 110
120 130 140 150
pF1KE1 WFLCGPAEPQQPVQLTKESEPSAR----TKFYFEQSW
:::: : .:::.::. : .. : :::.:
CCDS21 WFLCTVPEADQPVRLTQLPENGGWNAPITDFYFQQCD
120 130 140 150
>>CCDS2115.1 IL1RN gene_id:3557|Hs108|chr2 (143 aa)
initn: 322 init1: 260 opt: 312 Z-score: 418.6 bits: 83.4 E(32554): 5.4e-17
Smith-Waterman score: 312; 41.6% identity (67.9% similar) in 137 aa overlap (16-150:10-141)
10 20 30 40 50
pF1KE1 MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCC-AEKICTLPNRGLDRTKVPIFL
.::..: :..::..: . : ::: ..: . .::
CCDS21 MQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPH-----ALFL
10 20 30 40
60 70 80 90 100 110
pF1KE1 GIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPG
::.::. ::.::.. . :::: ::: .: .. .. ::.:..:.:: . .:.:: ::
CCDS21 GIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPG
50 60 70 80 90 100
120 130 140 150
pF1KE1 WFLCGPAEPQQPVQLTK-ESEPSARTKFYFEQSW
:::: : .:::.::. .: :::::..
CCDS21 WFLCTAMEADQPVSLTNMPDEGVMVTKFYFQEDE
110 120 130 140
>>CCDS2113.1 IL1RN gene_id:3557|Hs108|chr2 (159 aa)
initn: 322 init1: 260 opt: 312 Z-score: 418.0 bits: 83.5 E(32554): 5.8e-17
Smith-Waterman score: 312; 41.6% identity (67.9% similar) in 137 aa overlap (16-150:26-157)
10 20 30 40
pF1KE1 MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCC-AEKICTLPNRG
.::..: :..::..: . : ::: ..: .
CCDS21 MALETICRPSGRKSSKMQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEP
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 LDRTKVPIFLGIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSA
.::::.::. ::.::.. . :::: ::: .: .. .. ::.:..:.:: .
CCDS21 H-----ALFLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPT
70 80 90 100 110
110 120 130 140 150
pF1KE1 FRLEAAAWPGWFLCGPAEPQQPVQLTK-ESEPSARTKFYFEQSW
.:.:: :::::: : .:::.::. .: :::::..
CCDS21 TSFESAACPGWFLCTAMEADQPVSLTNMPDEGVMVTKFYFQEDE
120 130 140 150
>>CCDS46396.1 IL1RN gene_id:3557|Hs108|chr2 (177 aa)
initn: 322 init1: 260 opt: 312 Z-score: 417.3 bits: 83.5 E(32554): 6.4e-17
Smith-Waterman score: 312; 41.6% identity (67.9% similar) in 137 aa overlap (16-150:44-175)
10 20 30 40
pF1KE1 MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCC-AEKICT
.::..: :..::..: . : ::: .
CCDS46 LLLFLFHSETICRPSGRKSSKMQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDV
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE1 LPNRGLDRTKVPIFLGIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQS
.: . .::::.::. ::.::.. . :::: ::: .: .. .. ::.:..:
CCDS46 VPIEPH-----ALFLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRS
80 90 100 110 120
110 120 130 140 150
pF1KE1 SSGSAFRLEAAAWPGWFLCGPAEPQQPVQLTK-ESEPSARTKFYFEQSW
.:: . .:.:: :::::: : .:::.::. .: :::::..
CCDS46 DSGPTTSFESAACPGWFLCTAMEADQPVSLTNMPDEGVMVTKFYFQEDE
130 140 150 160 170
>>CCDS2114.1 IL1RN gene_id:3557|Hs108|chr2 (180 aa)
initn: 285 init1: 260 opt: 312 Z-score: 417.2 bits: 83.5 E(32554): 6.4e-17
Smith-Waterman score: 312; 41.6% identity (67.9% similar) in 137 aa overlap (16-150:47-178)
10 20 30 40
pF1KE1 MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCC-AEKICT
.::..: :..::..: . : ::: .
CCDS21 GEDNADSKETICRPSGRKSSKMQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDV
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE1 LPNRGLDRTKVPIFLGIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQS
.: . .::::.::. ::.::.. . :::: ::: .: .. .. ::.:..:
CCDS21 VPIEPH-----ALFLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRS
80 90 100 110 120 130
110 120 130 140 150
pF1KE1 SSGSAFRLEAAAWPGWFLCGPAEPQQPVQLTK-ESEPSARTKFYFEQSW
.:: . .:.:: :::::: : .:::.::. .: :::::..
CCDS21 DSGPTTSFESAACPGWFLCTAMEADQPVSLTNMPDEGVMVTKFYFQEDE
140 150 160 170 180
>>CCDS2108.1 IL36G gene_id:56300|Hs108|chr2 (169 aa)
initn: 246 init1: 190 opt: 235 Z-score: 315.8 bits: 64.7 E(32554): 2.9e-11
Smith-Waterman score: 235; 33.6% identity (62.7% similar) in 134 aa overlap (18-146:32-163)
10 20 30 40
pF1KE1 MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCCAEKI----C
. ..: .:: ::. : .:. . :
CCDS21 RGTPGDADGGGRAVYQSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVITC
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 TLPNRGLDRTKV-PIFLGIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFF
:. .:.. . ::.::::. :: : .. : :.:::.. .: .:: : . : :.
CCDS21 KYPE-ALEQGRGDPIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFY
70 80 90 100 110 120
110 120 130 140 150
pF1KE1 QSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQLTKESEPSARTKFYFEQSW
....: . ::..:.: ::. . .. .::. ::.: : : :
CCDS21 RAKTGRTSTLESVAFPDWFI-ASSKRDQPIILTSELGKSYNTAFELNIND
130 140 150 160
>>CCDS2110.1 IL36B gene_id:27177|Hs108|chr2 (157 aa)
initn: 239 init1: 223 opt: 234 Z-score: 315.0 bits: 64.4 E(32554): 3.2e-11
Smith-Waterman score: 234; 29.5% identity (59.6% similar) in 146 aa overlap (8-149:10-154)
10 20 30 40 50
pF1KE1 MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCCAEKICTLPNRGL---DRTKV
. : :. . : ... .:. :.. :.. . . . : :. :
CCDS21 MNPQREAAPKSYAIRDSRQ-MVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKG
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 P-IFLGIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEA
..:::.: . :: :.: . :.:::.. :: .:: . : ::... ::. ...
CCDS21 NMVYLGIKGKDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQS
60 70 80 90 100 110
120 130 140 150
pF1KE1 AAWPGWFLCGPAEPQQPVQLTKESEPSARTKFYFEQSW
...::::. . ::. :::: . :.::..
CCDS21 VSYPGWFIATSTTSGQPIFLTKERGITNNTNFYLDSVE
120 130 140 150
>>CCDS42734.1 IL36A gene_id:27179|Hs108|chr2 (158 aa)
initn: 221 init1: 221 opt: 232 Z-score: 312.3 bits: 63.9 E(32554): 4.5e-11
Smith-Waterman score: 232; 31.4% identity (58.6% similar) in 140 aa overlap (12-146:15-152)
10 20 30 40 50
pF1KE1 MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCCAEKICTLPNRGL-----DR
:. .... .: : :.. : : : . : . ::
CCDS42 MEKALKIDTPQQGSIQDINHRVWVLQD-QTLIAVPRKDRMSPVTIALISCRHVETLEKDR
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 TKVPIFLGIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRL
. ::.::..: . :: :... . :.:::.. .: .::. : . : :..:.:: .
CCDS42 GN-PIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTF
60 70 80 90 100 110
120 130 140 150
pF1KE1 EAAAWPGWFLCGPAEPQQPVQLTKESEPSARTKFYFEQSW
:..:.::::. .: :. ::.: . : :
CCDS42 ESVAFPGWFIAVSSEGGCPLILTQELGKANTTDFGLTMLF
120 130 140 150
152 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 18:18:19 2016 done: Sun Nov 6 18:18:19 2016
Total Scan time: 1.830 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]