FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1635, 151 aa
  1>>>pF1KE1635 151 - 151 aa - 151 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1432+/-0.000696; mu= 12.4570+/- 0.042
 mean_var=61.5892+/-12.383, 0's: 0 Z-trim(109.4): 12  B-trim: 0 in 0/50
 Lambda= 0.163426
 statistics sampled from 10894 (10896) to 10894 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.722), E-opt: 0.2 (0.335), width:  16
 Scan time:  1.470

The best scores are:                                      opt bits E(32554)
CCDS4190.1 LECT2 gene_id:3950|Hs108|chr5           ( 151) 1034 251.7 1.3e-67


>>CCDS4190.1 LECT2 gene_id:3950|Hs108|chr5                (151 aa)
 initn: 1034 init1: 1034 opt: 1034  Z-score: 1327.3  bits: 251.7 E(32554): 1.3e-67
Smith-Waterman score: 1034; 99.3% identity (100.0% similar) in 151 aa overlap (1-151:1-151)

               10        20        30        40        50        60
pF1KE1 MFSTKALLLAGLISTALAGPWANICAGKSSNEIRTCDRHGCGQYSAQRSQRPHQGVDVLC
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::
CCDS41 MFSTKALLLAGLISTALAGPWANICAGKSSNEIRTCDRHGCGQYSAQRSQRPHQGVDILC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 SAGSTVYAPFTGMIVGQEKPYQNKNAINNGVRISGRGFCVKMFYIKPIKYKGPIKKGEKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SAGSTVYAPFTGMIVGQEKPYQNKNAINNGVRISGRGFCVKMFYIKPIKYKGPIKKGEKL
               70        80        90       100       110       120

              130       140       150 
pF1KE1 GTLLPLQKVYPGIQSHVHIENCDSSDPTAYL
       :::::::::::::::::::::::::::::::
CCDS41 GTLLPLQKVYPGIQSHVHIENCDSSDPTAYL
              130       140       150 




151 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 17:08:19 2016 done: Sun Nov  6 17:08:19 2016
 Total Scan time:  1.470 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]