Result of FASTA (ccds) for
pFN21AE1630
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1630, 147 aa
1>>>pF1KE1630 147 - 147 aa - 147 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9513+/-0.000553; mu= 13.7437+/- 0.034
mean_var=61.6172+/-12.275, 0's: 0 Z-trim(112.8): 69 B-trim: 0 in 0/51
Lambda= 0.163389
statistics sampled from 13478 (13549) to 13478 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.792), E-opt: 0.2 (0.416), width: 16
Scan time: 1.780
The best scores are: opt bits E(32554)
CCDS43369.1 UBE2D2 gene_id:7322|Hs108|chr5 ( 147) 1039 252.3 7.6e-68
CCDS3660.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 147) 1016 246.9 3.3e-66
CCDS3661.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 148) 1012 246.0 6.3e-66
CCDS5474.1 UBE2D4 gene_id:51619|Hs108|chr7 ( 147) 987 240.1 3.7e-64
CCDS3659.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 149) 983 239.1 7.3e-64
CCDS7252.1 UBE2D1 gene_id:7321|Hs108|chr10 ( 147) 955 232.5 7e-62
CCDS47275.1 UBE2D2 gene_id:7322|Hs108|chr5 ( 118) 835 204.2 1.9e-53
CCDS75172.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 118) 827 202.3 7.1e-53
CCDS73139.1 UBE2D1 gene_id:7321|Hs108|chr10 ( 109) 700 172.4 6.8e-44
CCDS2282.1 UBE2E3 gene_id:10477|Hs108|chr2 ( 207) 668 165.0 2.1e-41
CCDS2638.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 193) 663 163.8 4.6e-41
CCDS2637.1 UBE2E2 gene_id:7325|Hs108|chr3 ( 201) 663 163.8 4.7e-41
CCDS56244.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 160) 657 162.3 1e-40
CCDS2639.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 176) 581 144.4 2.8e-35
CCDS31875.1 UBE2N gene_id:7334|Hs108|chr12 ( 152) 460 115.9 9.6e-27
CCDS14580.1 UBE2A gene_id:7319|Hs108|chrX ( 152) 440 111.2 2.5e-25
CCDS4174.1 UBE2B gene_id:7320|Hs108|chr5 ( 152) 434 109.7 6.7e-25
CCDS1425.1 UBE2T gene_id:29089|Hs108|chr1 ( 197) 432 109.3 1.1e-24
CCDS33976.1 UBE2K gene_id:3093|Hs108|chr4 ( 200) 405 103.0 9.5e-23
CCDS13790.1 UBE2L3 gene_id:7332|Hs108|chr22 ( 154) 399 101.5 2.1e-22
CCDS58795.1 UBE2L3 gene_id:7332|Hs108|chr22 ( 212) 389 99.2 1.4e-21
CCDS78500.1 UBE2A gene_id:7319|Hs108|chrX ( 119) 377 96.2 6.1e-21
CCDS33114.1 UBE2S gene_id:27338|Hs108|chr19 ( 222) 374 95.7 1.6e-20
CCDS58796.1 UBE2L3 gene_id:7332|Hs108|chr22 ( 122) 360 92.2 1e-19
CCDS7960.1 UBE2L6 gene_id:9246|Hs108|chr11 ( 153) 359 92.1 1.4e-19
CCDS47043.1 UBE2K gene_id:3093|Hs108|chr4 ( 157) 355 91.1 2.8e-19
CCDS10433.1 UBE2I gene_id:7329|Hs108|chr16 ( 158) 349 89.7 7.4e-19
CCDS13370.1 UBE2C gene_id:11065|Hs108|chr20 ( 179) 347 89.3 1.1e-18
CCDS13374.1 UBE2C gene_id:11065|Hs108|chr20 ( 140) 327 84.5 2.4e-17
CCDS12987.1 UBE2M gene_id:9040|Hs108|chr19 ( 183) 327 84.6 3e-17
CCDS627.1 UBE2U gene_id:148581|Hs108|chr1 ( 226) 319 82.7 1.3e-16
CCDS5814.1 UBE2H gene_id:7328|Hs108|chr7 ( 183) 309 80.3 5.8e-16
CCDS13714.1 UBE2G2 gene_id:7327|Hs108|chr21 ( 165) 298 77.7 3.2e-15
CCDS32532.1 UBE2G1 gene_id:7326|Hs108|chr17 ( 170) 297 77.5 3.9e-15
CCDS13372.1 UBE2C gene_id:11065|Hs108|chr20 ( 150) 294 76.7 5.7e-15
CCDS2523.1 UBE2F gene_id:140739|Hs108|chr2 ( 185) 275 72.3 1.5e-13
CCDS63175.1 UBE2F gene_id:140739|Hs108|chr2 ( 161) 268 70.6 4.2e-13
CCDS47874.2 UBE2W gene_id:55284|Hs108|chr8 ( 180) 266 70.2 6.4e-13
CCDS47875.2 UBE2W gene_id:55284|Hs108|chr8 ( 191) 266 70.2 6.7e-13
CCDS47044.1 UBE2K gene_id:3093|Hs108|chr4 ( 149) 257 68.0 2.4e-12
CCDS11540.2 UBE2Z gene_id:65264|Hs108|chr17 ( 354) 249 66.4 1.8e-11
CCDS6546.1 UBE2R2 gene_id:54926|Hs108|chr9 ( 238) 246 65.6 2.1e-11
CCDS33586.1 UBE2G2 gene_id:7327|Hs108|chr21 ( 137) 241 64.2 3e-11
CCDS63177.1 UBE2F gene_id:140739|Hs108|chr2 ( 153) 237 63.3 6.4e-11
CCDS14.1 UBE2J2 gene_id:118424|Hs108|chr1 ( 259) 239 63.9 7.1e-11
CCDS5021.1 UBE2J1 gene_id:51465|Hs108|chr6 ( 318) 238 63.7 9.8e-11
>>CCDS43369.1 UBE2D2 gene_id:7322|Hs108|chr5 (147 aa)
initn: 1039 init1: 1039 opt: 1039 Z-score: 1331.5 bits: 252.3 E(32554): 7.6e-68
Smith-Waterman score: 1039; 100.0% identity (100.0% similar) in 147 aa overlap (1-147:1-147)
10 20 30 40 50 60
pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
70 80 90 100 110 120
130 140
pF1KE1 PEIARIYKTDREKYNRIAREWTQKYAM
:::::::::::::::::::::::::::
CCDS43 PEIARIYKTDREKYNRIAREWTQKYAM
130 140
>>CCDS3660.1 UBE2D3 gene_id:7323|Hs108|chr4 (147 aa)
initn: 1016 init1: 1016 opt: 1016 Z-score: 1302.2 bits: 246.9 E(32554): 3.3e-66
Smith-Waterman score: 1016; 97.3% identity (100.0% similar) in 147 aa overlap (1-147:1-147)
10 20 30 40 50 60
pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
::::::.:::.:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
70 80 90 100 110 120
130 140
pF1KE1 PEIARIYKTDREKYNRIAREWTQKYAM
:::::::::::.:::::.:::::::::
CCDS36 PEIARIYKTDRDKYNRISREWTQKYAM
130 140
>>CCDS3661.1 UBE2D3 gene_id:7323|Hs108|chr4 (148 aa)
initn: 1012 init1: 1012 opt: 1012 Z-score: 1297.0 bits: 246.0 E(32554): 6.3e-66
Smith-Waterman score: 1012; 96.6% identity (100.0% similar) in 147 aa overlap (1-147:1-147)
10 20 30 40 50 60
pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
::::::.:::.:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
70 80 90 100 110 120
130 140
pF1KE1 PEIARIYKTDREKYNRIAREWTQKYAM
:::::::::::.::::.:::::.::::
CCDS36 PEIARIYKTDRDKYNRLAREWTEKYAML
130 140
>>CCDS5474.1 UBE2D4 gene_id:51619|Hs108|chr7 (147 aa)
initn: 987 init1: 987 opt: 987 Z-score: 1265.2 bits: 240.1 E(32554): 3.7e-64
Smith-Waterman score: 987; 93.2% identity (98.6% similar) in 147 aa overlap (1-147:1-147)
10 20 30 40 50 60
pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
::::::.:::.:: :::::::::::::::.::::::::::::::::::::::::::::::
CCDS54 MALKRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
:::::::::::.::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS54 PFKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV
70 80 90 100 110 120
130 140
pF1KE1 PEIARIYKTDREKYNRIAREWTQKYAM
::::. ::.:::::::.::::::::::
CCDS54 PEIAHTYKADREKYNRLAREWTQKYAM
130 140
>>CCDS3659.1 UBE2D3 gene_id:7323|Hs108|chr4 (149 aa)
initn: 983 init1: 983 opt: 983 Z-score: 1260.0 bits: 239.1 E(32554): 7.3e-64
Smith-Waterman score: 983; 95.8% identity (98.6% similar) in 144 aa overlap (4-147:6-149)
10 20 30 40 50
pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPT
: . :::.:::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 MLSNRKCLSKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDP
70 80 90 100 110 120
120 130 140
pF1KE1 LVPEIARIYKTDREKYNRIAREWTQKYAM
:::::::::::::.:::::.:::::::::
CCDS36 LVPEIARIYKTDRDKYNRISREWTQKYAM
130 140
>>CCDS7252.1 UBE2D1 gene_id:7321|Hs108|chr10 (147 aa)
initn: 955 init1: 955 opt: 955 Z-score: 1224.5 bits: 232.5 E(32554): 7e-62
Smith-Waterman score: 955; 89.1% identity (97.3% similar) in 147 aa overlap (1-147:1-147)
10 20 30 40 50 60
pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
::::::.:::.:: :::::.:::::::::.:::::::::: :: :::::::::.::::::
CCDS72 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
::::::.::::.::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS72 PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV
70 80 90 100 110 120
130 140
pF1KE1 PEIARIYKTDREKYNRIAREWTQKYAM
:.::.:::.:.::::: ::::::::::
CCDS72 PDIAQIYKSDKEKYNRHAREWTQKYAM
130 140
>>CCDS47275.1 UBE2D2 gene_id:7322|Hs108|chr5 (118 aa)
initn: 835 init1: 835 opt: 835 Z-score: 1073.0 bits: 204.2 E(32554): 1.9e-53
Smith-Waterman score: 835; 100.0% identity (100.0% similar) in 118 aa overlap (30-147:1-118)
10 20 30 40 50 60
pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
:::::::::::::::::::::::::::::::
CCDS47 MFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
10 20 30
70 80 90 100 110 120
pF1KE1 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
40 50 60 70 80 90
130 140
pF1KE1 PEIARIYKTDREKYNRIAREWTQKYAM
:::::::::::::::::::::::::::
CCDS47 PEIARIYKTDREKYNRIAREWTQKYAM
100 110
>>CCDS75172.1 UBE2D3 gene_id:7323|Hs108|chr4 (118 aa)
initn: 827 init1: 827 opt: 827 Z-score: 1062.8 bits: 202.3 E(32554): 7.1e-53
Smith-Waterman score: 827; 98.3% identity (100.0% similar) in 118 aa overlap (30-147:1-118)
10 20 30 40 50 60
pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
:::::::::::::::::::::::::::::::
CCDS75 MFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
10 20 30
70 80 90 100 110 120
pF1KE1 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
40 50 60 70 80 90
130 140
pF1KE1 PEIARIYKTDREKYNRIAREWTQKYAM
:::::::::::.:::::.:::::::::
CCDS75 PEIARIYKTDRDKYNRISREWTQKYAM
100 110
>>CCDS73139.1 UBE2D1 gene_id:7321|Hs108|chr10 (109 aa)
initn: 697 init1: 697 opt: 700 Z-score: 901.5 bits: 172.4 E(32554): 6.8e-44
Smith-Waterman score: 700; 89.1% identity (96.4% similar) in 110 aa overlap (38-147:1-109)
10 20 30 40 50 60
pF1KE1 KELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKV
: : :: :::::::::.::::::::::::.
CCDS73 MTP-DSAYQGGVFFLTVHFPTDYPFKPPKI
10 20
70 80 90 100 110 120
pF1KE1 AFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY
::::.::::::::::::::::::::::::::.::::::::::::::::::::::.::.::
CCDS73 AFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIY
30 40 50 60 70 80
130 140
pF1KE1 KTDREKYNRIAREWTQKYAM
:.:.::::: ::::::::::
CCDS73 KSDKEKYNRHAREWTQKYAM
90 100
>>CCDS2282.1 UBE2E3 gene_id:10477|Hs108|chr2 (207 aa)
initn: 668 init1: 668 opt: 668 Z-score: 856.7 bits: 165.0 E(32554): 2.1e-41
Smith-Waterman score: 668; 66.4% identity (84.6% similar) in 143 aa overlap (4-146:64-206)
10 20 30
pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHW
:::.::: ... ::: .::::: ::....:
CCDS22 EQEERKPSATQQKKNTKLSSKTTAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEW
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE1 QATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQW
..::.:: : :.:::::: : : .:::::::::.: ::::: ::::.: ::::::...:
CCDS22 RSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNW
100 110 120 130 140 150
100 110 120 130 140
pF1KE1 SPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM
::::::::::::::::: : :: :::: :: : :.: ...::::.::..::
CCDS22 SPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYAT
160 170 180 190 200
147 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 10:57:57 2016 done: Sun Nov 6 10:57:57 2016
Total Scan time: 1.780 Total Display time: -0.040
Function used was FASTA [36.3.4 Apr, 2011]