Result of FASTA (ccds) for
pFN21AE1629
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1629, 146 aa
1>>>pF1KE1629 146 - 146 aa - 146 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4265+/-0.000902; mu= 11.6602+/- 0.055
mean_var=107.3957+/-20.534, 0's: 0 Z-trim(109.5): 130 B-trim: 4 in 1/52
Lambda= 0.123760
statistics sampled from 10758 (10921) to 10758 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.72), E-opt: 0.2 (0.335), width: 16
Scan time: 1.810
The best scores are: opt bits E(32554)
CCDS7068.1 CALML5 gene_id:51806|Hs108|chr10 ( 146) 931 176.1 6.7e-45
CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 ( 149) 494 98.1 2.1e-21
CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 ( 149) 494 98.1 2.1e-21
CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 ( 149) 494 98.1 2.1e-21
CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 ( 149) 465 92.9 7.6e-20
CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18 ( 172) 373 76.6 7.4e-15
CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX ( 172) 352 72.8 9.9e-14
CCDS73333.1 CABP4 gene_id:57010|Hs108|chr11 ( 170) 338 70.3 5.6e-13
CCDS8166.1 CABP4 gene_id:57010|Hs108|chr11 ( 275) 338 70.5 7.7e-13
CCDS13375.1 TNNC2 gene_id:7125|Hs108|chr20 ( 160) 328 68.5 1.8e-12
CCDS9204.1 CABP1 gene_id:9478|Hs108|chr12 ( 167) 321 67.3 4.5e-12
CCDS9205.1 CABP1 gene_id:9478|Hs108|chr12 ( 227) 321 67.4 5.5e-12
CCDS31913.1 CABP1 gene_id:9478|Hs108|chr12 ( 370) 321 67.6 7.7e-12
CCDS8170.1 CABP2 gene_id:51475|Hs108|chr11 ( 220) 314 66.1 1.3e-11
CCDS2857.1 TNNC1 gene_id:7134|Hs108|chr3 ( 161) 309 65.1 1.9e-11
CCDS4066.1 CETN3 gene_id:1070|Hs108|chr5 ( 167) 305 64.4 3.3e-11
>>CCDS7068.1 CALML5 gene_id:51806|Hs108|chr10 (146 aa)
initn: 931 init1: 931 opt: 931 Z-score: 919.5 bits: 176.1 E(32554): 6.7e-45
Smith-Waterman score: 931; 100.0% identity (100.0% similar) in 146 aa overlap (1-146:1-146)
10 20 30 40 50 60
pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS70 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DGEISFQEFLTAAKKARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS70 DGEISFQEFLTAAKKARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELD
70 80 90 100 110 120
130 140
pF1KE1 AMIREADVDQDGRVNYEEFARMLAQE
::::::::::::::::::::::::::
CCDS70 AMIREADVDQDGRVNYEEFARMLAQE
130 140
>>CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 (149 aa)
initn: 489 init1: 253 opt: 494 Z-score: 497.7 bits: 98.1 E(32554): 2.1e-21
Smith-Waterman score: 494; 51.4% identity (83.6% similar) in 146 aa overlap (1-143:1-146)
10 20 30 40 50 60
pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDG
:: .:: :. :..:.::: : ::.:::...:::..... :.: .::.:. .:.:::.::
CCDS18 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 DGEISFQEFLTA-AKKARA--GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQE
.: :.: :::: :.: . . :... :::.::.::.:.:.. :::..:..::. : .:
CCDS18 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
70 80 90 100 110 120
120 130 140
pF1KE1 ELDAMIREADVDQDGRVNYEEFARMLAQE
:.: ::::::.: ::.::::::..:.
CCDS18 EVDEMIREADIDGDGQVNYEEFVQMMTAK
130 140
>>CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 (149 aa)
initn: 489 init1: 253 opt: 494 Z-score: 497.7 bits: 98.1 E(32554): 2.1e-21
Smith-Waterman score: 494; 51.4% identity (83.6% similar) in 146 aa overlap (1-143:1-146)
10 20 30 40 50 60
pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDG
:: .:: :. :..:.::: : ::.:::...:::..... :.: .::.:. .:.:::.::
CCDS33 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 DGEISFQEFLTA-AKKARA--GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQE
.: :.: :::: :.: . . :... :::.::.::.:.:.. :::..:..::. : .:
CCDS33 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
70 80 90 100 110 120
120 130 140
pF1KE1 ELDAMIREADVDQDGRVNYEEFARMLAQE
:.: ::::::.: ::.::::::..:.
CCDS33 EVDEMIREADIDGDGQVNYEEFVQMMTAK
130 140
>>CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 (149 aa)
initn: 489 init1: 253 opt: 494 Z-score: 497.7 bits: 98.1 E(32554): 2.1e-21
Smith-Waterman score: 494; 51.4% identity (83.6% similar) in 146 aa overlap (1-143:1-146)
10 20 30 40 50 60
pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDG
:: .:: :. :..:.::: : ::.:::...:::..... :.: .::.:. .:.:::.::
CCDS98 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 DGEISFQEFLTA-AKKARA--GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQE
.: :.: :::: :.: . . :... :::.::.::.:.:.. :::..:..::. : .:
CCDS98 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
70 80 90 100 110 120
120 130 140
pF1KE1 ELDAMIREADVDQDGRVNYEEFARMLAQE
:.: ::::::.: ::.::::::..:.
CCDS98 EVDEMIREADIDGDGQVNYEEFVQMMTAK
130 140
>>CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 (149 aa)
initn: 531 init1: 240 opt: 465 Z-score: 469.8 bits: 92.9 E(32554): 7.6e-20
Smith-Waterman score: 465; 47.0% identity (79.9% similar) in 149 aa overlap (1-146:1-149)
10 20 30 40 50 60
pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDG
:: .:: :. ...:.::: : ::.: :...:::..... :.: .::.:: ..::.: ::
CCDS70 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDG
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 DGEISFQEFL-TAAKKARA--GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQE
.: ..: ::: :.: . . :... :::.::.::.: ... :::..:. ::. : .:
CCDS70 NGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDE
70 80 90 100 110 120
120 130 140
pF1KE1 ELDAMIREADVDQDGRVNYEEFARMLAQE
:.: ::: ::.: ::.::::::.:.:...
CCDS70 EVDEMIRAADTDGDGQVNYEEFVRVLVSK
130 140
>>CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18 (172 aa)
initn: 428 init1: 210 opt: 373 Z-score: 380.2 bits: 76.6 E(32554): 7.4e-15
Smith-Waterman score: 373; 42.8% identity (71.0% similar) in 145 aa overlap (4-145:24-168)
10 20 30 40
pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKAT
::: ... . ..::. :.::.:::.:.:: .:..:
CCDS11 MASGFKKPSAASTGQKRKVAPKPELTEDQKQEVREAFDLFDVDGSGTIDAKELKVAMRAL
10 20 30 40 50 60
50 60 70 80 90
pF1KE1 GKNLSEAQLRKLISEVDSDGDGEISFQEFL---TAAKKARAGLEDLQVAFRAFDQDGDGH
: . . ...:.::::: .: :.:::..:: : . . :.. ::: ::.: :.
CCDS11 GFEPRKEEMKKMISEVDREGTGKISFNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGK
70 80 90 100 110 120
100 110 120 130 140
pF1KE1 ITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQE
:. .:.:. ::. : .:::. :: ::: : ::.:: ::: :.. .
CCDS11 ISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIMKKTSLY
130 140 150 160 170
>>CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX (172 aa)
initn: 408 init1: 204 opt: 352 Z-score: 360.0 bits: 72.8 E(32554): 9.9e-14
Smith-Waterman score: 352; 38.6% identity (72.4% similar) in 145 aa overlap (4-145:24-168)
10 20 30 40
pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKAT
::: :.. . ..::. :.::.:::...:: .:..:
CCDS14 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
10 20 30 40 50 60
50 60 70 80 90
pF1KE1 GKNLSEAQLRKLISEVDSDGDGEISFQEFLTAAKKA---RAGLEDLQVAFRAFDQDGDGH
: . .. ...:.:::.:..: :...: .:::. . . :.. ::. ::.: :.
CCDS14 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
70 80 90 100 110 120
100 110 120 130 140
pF1KE1 ITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQE
:. .:.:. ::. : .:::. :: ::: : ::.:. .:: :.. .
CCDS14 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
130 140 150 160 170
>>CCDS73333.1 CABP4 gene_id:57010|Hs108|chr11 (170 aa)
initn: 401 init1: 132 opt: 338 Z-score: 346.5 bits: 70.3 E(32554): 5.6e-13
Smith-Waterman score: 338; 40.0% identity (67.3% similar) in 150 aa overlap (4-145:20-169)
10 20 30 40
pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNL
:: ::: . . :: ::: .: :. .::: ... :
CCDS73 MTEPWLALGTSWTLPLQDRELGPEELDELQAAFEEFDTDRDGYISHRELGDCMRTLGYMP
10 20 30 40 50 60
50 60 70 80 90
pF1KE1 SEAQLRKLISEVDSDGDGEISFQEFLT-AAKKARA------GLEDLQVAFRAFDQDGDGH
.: .: .. ... :...:.::. . : : :...:..::: ::.: ::.
CCDS73 TEMELLEVSQHIKMRMGGRVDFEEFVELIGPKLREETAHMLGVRELRIAFREFDRDRDGR
70 80 90 100 110 120
100 110 120 130 140
pF1KE1 ITVDELRRAM-AGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQE
::: :::.:. : ::.:: ::: :.::.:.. :: :...::. ::..
CCDS73 ITVAELREAVPALLGEPLAGPELDEMLREVDLNGDGTVDFDEFVMMLSRH
130 140 150 160 170
>>CCDS8166.1 CABP4 gene_id:57010|Hs108|chr11 (275 aa)
initn: 422 init1: 132 opt: 338 Z-score: 344.0 bits: 70.5 E(32554): 7.7e-13
Smith-Waterman score: 338; 40.0% identity (67.3% similar) in 150 aa overlap (4-145:125-274)
10 20 30
pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQEL
:: ::: . . :: ::: .: :. .::
CCDS81 QSHRHRPDSLHDAAQRTYGPLLNRVFGKDRELGPEELDELQAAFEEFDTDRDGYISHREL
100 110 120 130 140 150
40 50 60 70 80
pF1KE1 GAALKATGKNLSEAQLRKLISEVDSDGDGEISFQEFLT-AAKKARA------GLEDLQVA
: ... : .: .: .. ... :...:.::. . : : :...:..:
CCDS81 GDCMRTLGYMPTEMELLEVSQHIKMRMGGRVDFEEFVELIGPKLREETAHMLGVRELRIA
160 170 180 190 200 210
90 100 110 120 130 140
pF1KE1 FRAFDQDGDGHITVDELRRAM-AGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ
:: ::.: ::.::: :::.:. : ::.:: ::: :.::.:.. :: :...::. ::..
CCDS81 FREFDRDRDGRITVAELREAVPALLGEPLAGPELDEMLREVDLNGDGTVDFDEFVMMLSR
220 230 240 250 260 270
pF1KE1 E
CCDS81 H
>>CCDS13375.1 TNNC2 gene_id:7125|Hs108|chr20 (160 aa)
initn: 370 init1: 182 opt: 328 Z-score: 337.2 bits: 68.5 E(32554): 1.8e-12
Smith-Waterman score: 328; 35.2% identity (71.0% similar) in 145 aa overlap (5-143:12-156)
10 20 30 40 50
pF1KE1 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLI
:. : :..: ::. :.::.: :...:::.... :.. .. .: .:
CCDS13 MTDQQAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAII
10 20 30 40 50 60
60 70 80 90 100
pF1KE1 SEVDSDGDGEISFQEFLTAA----KKARAGL--EDLQVAFRAFDQDGDGHITVDELRRAM
::: ::.: :.:.:::. :. : :.: :: ::...::.: .:: . .
CCDS13 EEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIF
70 80 90 100 110 120
110 120 130 140
pF1KE1 AGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQE
. :. . .::........: ..:::....:: .:.
CCDS13 RASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEGVQ
130 140 150 160
146 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 15:35:51 2016 done: Sun Nov 6 15:35:51 2016
Total Scan time: 1.810 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]