Result of FASTA (ccds) for
pFN21AE1620
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1620, 132 aa
1>>>pF1KE1620 132 - 132 aa - 132 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0653+/-0.000964; mu= 11.6091+/- 0.058
mean_var=54.4211+/-10.917, 0's: 0 Z-trim(103.3): 27 B-trim: 300 in 1/47
Lambda= 0.173856
statistics sampled from 7311 (7336) to 7311 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.601), E-opt: 0.2 (0.225), width: 16
Scan time: 1.530
The best scores are: opt bits E(32554)
CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 ( 132) 850 221.2 1.5e-58
CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 ( 132) 587 155.2 1.1e-38
CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 ( 133) 563 149.2 7.1e-37
CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 ( 132) 505 134.6 1.7e-32
CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 ( 166) 480 128.4 1.6e-30
CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 ( 140) 475 127.1 3.3e-30
CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8 ( 135) 468 125.3 1.1e-29
CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 ( 134) 307 85.0 1.5e-17
CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 ( 134) 295 82.0 1.2e-16
CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 ( 137) 280 78.2 1.7e-15
CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3 ( 197) 281 78.5 2e-15
CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 ( 138) 260 73.2 5.6e-14
CCDS3712.1 FABP2 gene_id:2169|Hs108|chr4 ( 132) 253 71.4 1.8e-13
CCDS8574.1 RBP5 gene_id:83758|Hs108|chr12 ( 135) 219 62.9 6.8e-11
>>CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 (132 aa)
initn: 850 init1: 850 opt: 850 Z-score: 1164.6 bits: 221.2 E(32554): 1.5e-58
Smith-Waterman score: 850; 100.0% identity (100.0% similar) in 132 aa overlap (1-132:1-132)
10 20 30 40 50 60
pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM
70 80 90 100 110 120
130
pF1KE1 KGVTSTRVYERA
::::::::::::
CCDS62 KGVTSTRVYERA
130
>>CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 (132 aa)
initn: 585 init1: 571 opt: 587 Z-score: 808.1 bits: 155.2 E(32554): 1.1e-38
Smith-Waterman score: 587; 67.2% identity (88.5% similar) in 131 aa overlap (1-131:1-131)
10 20 30 40 50 60
pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN
: . :.:::::::::::::::: .:::.::::....:::..::: .::.:::..::::::
CCDS62 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM
::::: :::::.:.:::.::.:: .::. : : .::.:::: :::::: . :.:.:: :
CCDS62 TEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKM
70 80 90 100 110 120
130
pF1KE1 KGVTSTRVYERA
:::. ::.::.
CCDS62 KGVVCTRIYEKV
130
>>CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 (133 aa)
initn: 557 init1: 557 opt: 563 Z-score: 775.5 bits: 149.2 E(32554): 7.1e-37
Smith-Waterman score: 563; 64.9% identity (84.7% similar) in 131 aa overlap (1-131:1-131)
10 20 30 40 50 60
pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN
: :::.::::::.:.::::::: .:::::::.::.:.::. :: :::..:.:..:::::
CCDS34 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM
::::: :: ::::.::::::::: .::::: :::.:::::. ::. :. : ::.. .
CCDS34 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH
70 80 90 100 110 120
130
pF1KE1 KGVTSTRVYERA
.. ::.::.
CCDS34 GTAVCTRTYEKEA
130
>>CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 (132 aa)
initn: 533 init1: 497 opt: 505 Z-score: 696.9 bits: 134.6 E(32554): 1.7e-32
Smith-Waterman score: 505; 56.8% identity (85.6% similar) in 132 aa overlap (1-132:1-132)
10 20 30 40 50 60
pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN
: .:: .::::..:.:::.::: .:::::::.:....::..::: .:: ..:.. :::::
CCDS51 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM
::::: ::.::::.:::::. ::...::: :::.:::::: :.. :. .: :.:. ..
CCDS51 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMTLTF
70 80 90 100 110 120
130
pF1KE1 KGVTSTRVYERA
:...: ::.:
CCDS51 GDVVAVRHYEKA
130
>>CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 (166 aa)
initn: 490 init1: 472 opt: 480 Z-score: 661.4 bits: 128.4 E(32554): 1.6e-30
Smith-Waterman score: 480; 60.3% identity (87.9% similar) in 116 aa overlap (1-116:1-116)
10 20 30 40 50 60
pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN
: .:: .::::..:.:::.::: .:::::::.:....::..::: .:: ..:.. :::::
CCDS83 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM
::::: ::.::::.:::::. ::...::: :::.:::::: :.. :. .: :.:.
CCDS83 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMVSND
70 80 90 100 110 120
130
pF1KE1 KGVTSTRVYERA
CCDS83 NSPFFLVFFSSPHTSHLLPSSSLLLPFFLLPSFFNNTSLARFFNYM
130 140 150 160
>>CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 (140 aa)
initn: 503 init1: 465 opt: 475 Z-score: 655.8 bits: 127.1 E(32554): 3.3e-30
Smith-Waterman score: 475; 55.7% identity (79.4% similar) in 131 aa overlap (1-131:1-131)
10 20 30 40 50 60
pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN
: : . :::: .: :: .:::::.:.: :.::.. .:::.. ::..:::::::..: :::
CCDS47 MIDQLQGTWKSISCENSEDYMKELGIGRASRKLGRLAKPTVTISTDGDVITIKTKSIFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM
.:::: ::.::.:.: .:.:: .::: :..:: :::: ::: :: : :.::: ..
CCDS47 NEISFKLGEEFEEITPGGHKTKSKVTLDKESLIQVQDWDGKETTITRKLVDGKMVVESTV
70 80 90 100 110 120
130
pF1KE1 KGVTSTRVYERA
..: ::.::.
CCDS47 NSVICTRTYEKVSSNSVSNS
130 140
>>CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8 (135 aa)
initn: 467 init1: 443 opt: 468 Z-score: 646.6 bits: 125.3 E(32554): 1.1e-29
Smith-Waterman score: 468; 55.2% identity (85.6% similar) in 125 aa overlap (7-131:9-133)
10 20 30 40 50
pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTF
: :.::.:..::.::::.:::.: ::...::::. ::. .: .:::.:::.
CCDS62 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 KNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVEC
:.:..: ::..:.:.::: ::.... .. :.::. :.:::: .:: :: .: ::::::
CCDS62 KTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVEC
70 80 90 100 110 120
120 130
pF1KE1 VMKGVTSTRVYERA
::..:: ::.::.
CCDS62 VMNNVTCTRIYEKVE
130
>>CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 (134 aa)
initn: 313 init1: 236 opt: 307 Z-score: 428.4 bits: 85.0 E(32554): 1.5e-17
Smith-Waterman score: 307; 39.8% identity (68.0% similar) in 128 aa overlap (7-132:7-134)
10 20 30 40 50 60
pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN
::: :.::.::. :: .:. :::::.: . ::. .: ::: .::...:...:
CCDS10 MPADLSGTWTLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQNGDSFTIHTNSSLRN
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 TEISFILGQEFDEVTA--DDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVEC
..: .:.:::: . :.:: :: . :. :. .:: . :. . : ::: .:
CCDS10 YFVKFKVGEEFDEDNRGLDNRKCKSLVIWDNDRLTCIQKGEKKNRGWTHWIEGDKLHLEM
70 80 90 100 110 120
120 130
pF1KE1 VMKGVTSTRVYERA
.: . ....::
CCDS10 FCEGQVCKQTFQRA
130
>>CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 (134 aa)
initn: 277 init1: 211 opt: 295 Z-score: 412.1 bits: 82.0 E(32554): 1.2e-16
Smith-Waterman score: 295; 39.4% identity (66.1% similar) in 127 aa overlap (7-131:7-133)
10 20 30 40 50 60
pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN
:::.. :.:::. ::: . . :::::.: . .:. .:: . :. :::.:
CCDS31 MTRDQNGTWEMESNENFEGYMKALDIDFATRKIAVRLTQTKVIDQDGDNFKTKTTSTFRN
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 TEISFILGQEFDEVTA--DDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVEC
...: .: :::: : :.:.::. .: .: ::: ::: . .. :. : ::: .:
CCDS31 YDVDFTVGVEFDEYTKSLDNRHVKALVTWEGDVLVCVQKGEKENRGWKQWIEGDKLYLEL
70 80 90 100 110 120
120 130
pF1KE1 VMKGVTSTRVYERA
. . .:...
CCDS31 TCGDQVCRQVFKKK
130
>>CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 (137 aa)
initn: 265 init1: 137 opt: 280 Z-score: 391.7 bits: 78.2 E(32554): 1.7e-15
Smith-Waterman score: 280; 39.1% identity (63.2% similar) in 133 aa overlap (5-131:4-136)
10 20 30 40 50
pF1KE1 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMA--KPNMIISVNGDVITIKSESTF
:.::::. ::::::. .: .::. :::: : ::.. : .:: . ::. .:
CCDS10 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 KNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKW----DGKSTTIKRKREDDKL
..:::.: .:. :.: :.: :: .: : .. .: . :: .: :. .:.:
CCDS10 RTTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTRELANDEL
60 70 80 90 100 110
120 130
pF1KE1 VVECVMKGVTSTRVYERA
.. :. ::.: :
CCDS10 ILTFGADDVVCTRIYVRE
120 130
132 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 16:06:28 2016 done: Sun Nov 6 16:06:29 2016
Total Scan time: 1.530 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]