Result of FASTA (ccds) for
pFN21AE1567
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1567, 418 aa
1>>>pF1KE1567 418 - 418 aa - 418 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8449+/-0.000927; mu= 19.4119+/- 0.056
mean_var=60.6456+/-11.949, 0's: 0 Z-trim(104.4): 36 B-trim: 83 in 1/52
Lambda= 0.164693
statistics sampled from 7857 (7893) to 7857 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.623), E-opt: 0.2 (0.242), width: 16
Scan time: 2.750
The best scores are: opt bits E(32554)
CCDS9284.1 TUBA3C gene_id:7278|Hs108|chr13 ( 450) 2649 638.2 4.8e-183
CCDS33290.1 TUBA3D gene_id:113457|Hs108|chr2 ( 450) 2649 638.2 4.8e-183
CCDS2158.1 TUBA3E gene_id:112714|Hs108|chr2 ( 450) 2627 632.9 1.8e-181
CCDS8781.1 TUBA1A gene_id:7846|Hs108|chr12 ( 451) 2626 632.7 2.1e-181
CCDS58227.1 TUBA1A gene_id:7846|Hs108|chr12 ( 451) 2626 632.7 2.1e-181
CCDS31792.1 TUBA1B gene_id:10376|Hs108|chr12 ( 451) 2615 630.1 1.3e-180
CCDS8782.1 TUBA1C gene_id:84790|Hs108|chr12 ( 449) 2614 629.8 1.5e-180
CCDS76556.1 TUBA1C gene_id:84790|Hs108|chr12 ( 519) 2607 628.2 5.4e-180
CCDS2438.1 TUBA4A gene_id:7277|Hs108|chr2 ( 448) 2568 618.9 3e-177
CCDS63131.1 TUBA4A gene_id:7277|Hs108|chr2 ( 433) 2466 594.7 5.7e-170
CCDS13751.1 TUBA8 gene_id:51807|Hs108|chr22 ( 449) 2441 588.7 3.6e-168
CCDS58226.1 TUBA1A gene_id:7846|Hs108|chr12 ( 416) 2364 570.4 1.1e-162
CCDS54495.1 TUBA8 gene_id:51807|Hs108|chr22 ( 383) 2081 503.2 1.8e-142
CCDS7066.2 TUBAL3 gene_id:79861|Hs108|chr10 ( 446) 2080 503.0 2.4e-142
CCDS53491.1 TUBAL3 gene_id:79861|Hs108|chr10 ( 406) 1870 453.0 2.3e-127
CCDS4687.1 TUBB gene_id:203068|Hs108|chr6 ( 444) 1112 273.0 4.1e-73
CCDS11858.1 TUBB6 gene_id:84617|Hs108|chr18 ( 446) 1104 271.1 1.5e-72
CCDS7039.1 TUBB4B gene_id:10383|Hs108|chr9 ( 445) 1100 270.1 3e-72
CCDS12168.1 TUBB4A gene_id:10382|Hs108|chr19 ( 444) 1099 269.9 3.5e-72
CCDS4484.1 TUBB2A gene_id:7280|Hs108|chr6 ( 445) 1095 268.9 6.7e-72
CCDS4485.1 TUBB2B gene_id:347733|Hs108|chr6 ( 445) 1093 268.4 9.4e-72
CCDS10988.1 TUBB3 gene_id:10381|Hs108|chr16 ( 450) 1088 267.3 2.2e-71
CCDS7051.1 TUBB8 gene_id:347688|Hs108|chr10 ( 444) 1066 262.0 8e-70
CCDS13475.1 TUBB1 gene_id:81027|Hs108|chr20 ( 451) 1042 256.3 4.2e-68
CCDS78124.1 TUBB gene_id:203068|Hs108|chr6 ( 372) 901 222.8 4.4e-58
CCDS56012.1 TUBB3 gene_id:10381|Hs108|chr16 ( 378) 889 219.9 3.2e-57
CCDS11433.1 TUBG1 gene_id:7283|Hs108|chr17 ( 451) 767 191.0 2e-48
CCDS32658.1 TUBG2 gene_id:27175|Hs108|chr17 ( 451) 763 190.0 3.8e-48
CCDS5100.1 TUBE1 gene_id:51175|Hs108|chr6 ( 475) 439 113.1 5.9e-25
CCDS54154.1 TUBD1 gene_id:51174|Hs108|chr17 ( 396) 372 97.1 3.2e-20
CCDS11620.1 TUBD1 gene_id:51174|Hs108|chr17 ( 453) 372 97.1 3.5e-20
CCDS54153.1 TUBD1 gene_id:51174|Hs108|chr17 ( 398) 367 95.9 7.2e-20
CCDS54152.1 TUBD1 gene_id:51174|Hs108|chr17 ( 351) 357 93.5 3.4e-19
CCDS77153.1 TUBB6 gene_id:84617|Hs108|chr18 ( 104) 269 72.2 2.5e-13
>>CCDS9284.1 TUBA3C gene_id:7278|Hs108|chr13 (450 aa)
initn: 2649 init1: 2649 opt: 2649 Z-score: 3399.7 bits: 638.2 E(32554): 4.8e-183
Smith-Waterman score: 2733; 92.9% identity (92.9% similar) in 450 aa overlap (1-418:1-450)
10 20 30 40 50 60
pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
310 320 330 340 350 360
370 380 390
pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD----------------------------
::::::::::::::::::::::::::::::::
CCDS92 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
370 380 390 400 410 420
400 410
pF1KE1 ----LAALEKDYEEVGVDSVEAEAEEGEEY
::::::::::::::::::::::::::
CCDS92 AREDLAALEKDYEEVGVDSVEAEAEEGEEY
430 440 450
>>CCDS33290.1 TUBA3D gene_id:113457|Hs108|chr2 (450 aa)
initn: 2649 init1: 2649 opt: 2649 Z-score: 3399.7 bits: 638.2 E(32554): 4.8e-183
Smith-Waterman score: 2733; 92.9% identity (92.9% similar) in 450 aa overlap (1-418:1-450)
10 20 30 40 50 60
pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
310 320 330 340 350 360
370 380 390
pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD----------------------------
::::::::::::::::::::::::::::::::
CCDS33 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
370 380 390 400 410 420
400 410
pF1KE1 ----LAALEKDYEEVGVDSVEAEAEEGEEY
::::::::::::::::::::::::::
CCDS33 AREDLAALEKDYEEVGVDSVEAEAEEGEEY
430 440 450
>>CCDS2158.1 TUBA3E gene_id:112714|Hs108|chr2 (450 aa)
initn: 2770 init1: 2627 opt: 2627 Z-score: 3371.5 bits: 632.9 E(32554): 1.8e-181
Smith-Waterman score: 2701; 92.0% identity (92.4% similar) in 450 aa overlap (1-418:1-450)
10 20 30 40 50 60
pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
CCDS21 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAASNYARGHYTIGKEIVDLVLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
:::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::
CCDS21 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYSKKSKLEFAIYPAPQVSTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
310 320 330 340 350 360
370 380 390
pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARL-----------------------------
:::::::::::::::::::::::::::::::
CCDS21 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMYAKWAFVHWYVGEGMEEGEFSE
370 380 390 400 410 420
400 410
pF1KE1 ---DLAALEKDYEEVGVDSVEAEAEEGEEY
:::::::: :::::::::::::::: :
CCDS21 AREDLAALEKDCEEVGVDSVEAEAEEGEAY
430 440 450
>>CCDS8781.1 TUBA1A gene_id:7846|Hs108|chr12 (451 aa)
initn: 2652 init1: 2626 opt: 2626 Z-score: 3370.2 bits: 632.7 E(32554): 2.1e-181
Smith-Waterman score: 2686; 90.5% identity (92.5% similar) in 451 aa overlap (1-418:1-451)
10 20 30 40 50 60
pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
::::::::::::::.:::::::::::::::::::::::::::::::::::::::.:::::
CCDS87 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
::::::: ::::::::.::::::::::::.:::::::::::::::::::.::::::::::
CCDS87 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
CCDS87 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
310 320 330 340 350 360
370 380 390
pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD----------------------------
::::::::::::::::::::::::::::::::
CCDS87 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
370 380 390 400 410 420
400 410
pF1KE1 ----LAALEKDYEEVGVDSVEAEAEE-GEEY
.::::::::::::::::.:.:: ::::
CCDS87 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
430 440 450
>>CCDS58227.1 TUBA1A gene_id:7846|Hs108|chr12 (451 aa)
initn: 2652 init1: 2626 opt: 2626 Z-score: 3370.2 bits: 632.7 E(32554): 2.1e-181
Smith-Waterman score: 2686; 90.5% identity (92.5% similar) in 451 aa overlap (1-418:1-451)
10 20 30 40 50 60
pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
::::::::::::::.:::::::::::::::::::::::::::::::::::::::.:::::
CCDS58 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
::::::: ::::::::.::::::::::::.:::::::::::::::::::.::::::::::
CCDS58 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
CCDS58 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
310 320 330 340 350 360
370 380 390
pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD----------------------------
::::::::::::::::::::::::::::::::
CCDS58 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
370 380 390 400 410 420
400 410
pF1KE1 ----LAALEKDYEEVGVDSVEAEAEE-GEEY
.::::::::::::::::.:.:: ::::
CCDS58 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
430 440 450
>>CCDS31792.1 TUBA1B gene_id:10376|Hs108|chr12 (451 aa)
initn: 2641 init1: 2615 opt: 2615 Z-score: 3356.0 bits: 630.1 E(32554): 1.3e-180
Smith-Waterman score: 2675; 90.0% identity (92.5% similar) in 451 aa overlap (1-418:1-451)
10 20 30 40 50 60
pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
::::::::::::::.:::::::::::::::::::::::::::::::::::::::.:::::
CCDS31 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
::::::: ::::::::.::::::::::::.:::::::::::::::::::.::::::::::
CCDS31 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS31 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
::::::::::::::::.::::::::::::::::::::::.::::::::::::::::::::
CCDS31 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
310 320 330 340 350 360
370 380 390
pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD----------------------------
::::::::::::::::::::::::::::::::
CCDS31 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
370 380 390 400 410 420
400 410
pF1KE1 ----LAALEKDYEEVGVDSVEAEAEE-GEEY
.::::::::::::::::.:.:: ::::
CCDS31 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
430 440 450
>>CCDS8782.1 TUBA1C gene_id:84790|Hs108|chr12 (449 aa)
initn: 2713 init1: 2614 opt: 2614 Z-score: 3354.8 bits: 629.8 E(32554): 1.5e-180
Smith-Waterman score: 2656; 89.1% identity (92.4% similar) in 450 aa overlap (1-418:1-449)
10 20 30 40 50 60
pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
::::::::::::::.:::::::::::::::::::::::::::::::::::::::.:::::
CCDS87 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
::::::: ::::::::.::::::::::::.:::::::::::::::::::.::::::::::
CCDS87 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS87 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
CCDS87 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
CCDS87 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
310 320 330 340 350 360
370 380 390
pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD----------------------------
:::::::::::::::::::::::.::::::::
CCDS87 TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
370 380 390 400 410 420
400 410
pF1KE1 ----LAALEKDYEEVGVDSVEAEAEEGEEY
.:::::::::::.::...: .:::::
CCDS87 AREDMAALEKDYEEVGADSADGE-DEGEEY
430 440
>>CCDS76556.1 TUBA1C gene_id:84790|Hs108|chr12 (519 aa)
initn: 2706 init1: 2607 opt: 2607 Z-score: 3344.9 bits: 628.2 E(32554): 5.4e-180
Smith-Waterman score: 2649; 89.1% identity (92.4% similar) in 449 aa overlap (2-418:72-519)
10 20 30
pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQ
::::::::::::::::::::::::::::::
CCDS76 IYFTRTLQLPAPFNTCTSSKSRGEPGCDSKRECISIHVGQAGVQIGNACWELYCLEHGIQ
50 60 70 80 90 100
40 50 60 70 80 90
pF1KE1 PDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQ
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
CCDS76 PDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQ
110 120 130 140 150 160
100 110 120 130 140 150
pF1KE1 LITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFAS
:::::::::::::::::::::::.:::::::::::: ::::::::.::::::::::::.:
CCDS76 LITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTS
170 180 190 200 210 220
160 170 180 190 200 210
pF1KE1 LLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
CCDS76 LLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD
230 240 250 260 270 280
220 230 240 250 260 270
pF1KE1 ICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLAT
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
CCDS76 ICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLAT
290 300 310 320 330 340
280 290 300 310 320 330
pF1KE1 YAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAA
:::::::::::::::.:::::::::::::::::::::::::::::.::::::::::::::
CCDS76 YAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAA
350 360 370 380 390 400
340 350 360 370 380 390
pF1KE1 IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL
::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::
CCDS76 IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARL
410 420 430 440 450 460
400 410
pF1KE1 D--------------------------------LAALEKDYEEVGVDSVEAEAEEGEEY
: .:::::::::::.::...: .:::::
CCDS76 DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSADGE-DEGEEY
470 480 490 500 510
>>CCDS2438.1 TUBA4A gene_id:7277|Hs108|chr2 (448 aa)
initn: 2672 init1: 2568 opt: 2568 Z-score: 3295.7 bits: 618.9 E(32554): 3e-177
Smith-Waterman score: 2607; 87.3% identity (91.3% similar) in 449 aa overlap (1-417:1-448)
10 20 30 40 50 60
pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
::::::.::::::::.:::::::::::::::::::::::::::::::::.::: ::::::
CCDS24 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
::::::::::::::.::.:.: ::::::::::::::::::::::::::::::::.: :::
CCDS24 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
:::::.: ::::::::.::::::::::::.:::::::::::::::::::.::::::::::
CCDS24 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS24 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
::::::::::::::::.::::::::::::::::.:::::.::::::::::::::::::::
CCDS24 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
310 320 330 340 350 360
370 380 390
pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD----------------------------
::::::::::::::::::::::::::::::::
CCDS24 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
370 380 390 400 410 420
400 410
pF1KE1 ----LAALEKDYEEVGVDSVEAEAEEGEEY
.:::::::::::.:: : : .::::
CCDS24 AREDMAALEKDYEEVGIDSYEDE-DEGEE
430 440
>>CCDS63131.1 TUBA4A gene_id:7277|Hs108|chr2 (433 aa)
initn: 2570 init1: 2466 opt: 2466 Z-score: 3165.0 bits: 594.7 E(32554): 5.7e-170
Smith-Waterman score: 2505; 87.1% identity (91.0% similar) in 434 aa overlap (16-417:1-433)
10 20 30 40 50 60
pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
.:::::::::::::::::::::::::::::::::.::: ::::::
CCDS63 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK
10 20 30 40
70 80 90 100 110 120
pF1KE1 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
::::::::::::::.::.:.: ::::::::::::::::::::::::::::::::.: :::
CCDS63 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE1 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
:::::.: ::::::::.::::::::::::.:::::::::::::::::::.::::::::::
CCDS63 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS63 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
230 240 250 260 270 280
310 320 330 340 350 360
pF1KE1 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
::::::::::::::::.::::::::::::::::.:::::.::::::::::::::::::::
CCDS63 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
290 300 310 320 330 340
370 380 390
pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD----------------------------
::::::::::::::::::::::::::::::::
CCDS63 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
350 360 370 380 390 400
400 410
pF1KE1 ----LAALEKDYEEVGVDSVEAEAEEGEEY
.:::::::::::.:: : : .::::
CCDS63 AREDMAALEKDYEEVGIDSYEDE-DEGEE
410 420 430
418 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 01:49:26 2016 done: Mon Nov 7 01:49:27 2016
Total Scan time: 2.750 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]