Result of FASTA (omim) for
pFN21AE1546
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1546, 228 aa
1>>>pF1KE1546 228 - 228 aa - 228 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6355+/-0.000411; mu= 18.0483+/- 0.025
mean_var=68.5394+/-13.639, 0's: 0 Z-trim(111.6): 93 B-trim: 33 in 1/54
Lambda= 0.154919
statistics sampled from 20127 (20227) to 20127 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.605), E-opt: 0.2 (0.237), width: 16
Scan time: 5.300
The best scores are: opt bits E(85289)
NP_001760 (OMIM: 143030) CD9 antigen isoform 1 [Ho ( 228) 1537 352.4 3.6e-97
NP_001317241 (OMIM: 143030) CD9 antigen isform 2 [ ( 159) 1078 249.7 2.1e-66
XP_005253871 (OMIM: 143030) PREDICTED: CD9 antigen ( 249) 999 232.2 6e-61
NP_004347 (OMIM: 186845,613496) CD81 antigen isofo ( 236) 722 170.3 2.5e-42
NP_005716 (OMIM: 613133) tetraspanin-2 isoform 1 [ ( 221) 717 169.2 5.2e-42
XP_011518794 (OMIM: 186845,613496) PREDICTED: CD81 ( 229) 599 142.8 4.6e-34
NP_001295245 (OMIM: 613133) tetraspanin-2 isoform ( 193) 533 128.0 1.1e-29
XP_016874087 (OMIM: 186845,613496) PREDICTED: CD81 ( 165) 464 112.5 4.4e-25
NP_001284578 (OMIM: 186845,613496) CD81 antigen is ( 165) 464 112.5 4.4e-25
XP_006719646 (OMIM: 600769) PREDICTED: tetraspanin ( 237) 421 103.0 4.5e-22
XP_016875402 (OMIM: 600769) PREDICTED: tetraspanin ( 237) 421 103.0 4.5e-22
NP_004607 (OMIM: 600769) tetraspanin-8 [Homo sapie ( 237) 421 103.0 4.5e-22
XP_016855485 (OMIM: 613133) PREDICTED: tetraspanin ( 168) 380 93.7 2e-19
NP_001295244 (OMIM: 613133) tetraspanin-2 isoform ( 196) 380 93.8 2.2e-19
NP_000551 (OMIM: 151525) leukocyte surface antigen ( 219) 364 90.3 2.9e-18
NP_001035122 (OMIM: 151525) leukocyte surface anti ( 219) 364 90.3 2.9e-18
XP_006718286 (OMIM: 176807,600623) PREDICTED: CD82 ( 267) 351 87.4 2.5e-17
NP_002222 (OMIM: 176807,600623) CD82 antigen isofo ( 267) 351 87.4 2.5e-17
NP_620599 (OMIM: 179620,602243,609057) CD151 antig ( 253) 349 87.0 3.3e-17
NP_001034579 (OMIM: 179620,602243,609057) CD151 an ( 253) 349 87.0 3.3e-17
NP_620598 (OMIM: 179620,602243,609057) CD151 antig ( 253) 349 87.0 3.3e-17
NP_004348 (OMIM: 179620,602243,609057) CD151 antig ( 253) 349 87.0 3.3e-17
XP_005253159 (OMIM: 602644) PREDICTED: tetraspanin ( 238) 312 78.7 9.7e-15
NP_003262 (OMIM: 602644) tetraspanin-4 isoform a [ ( 238) 312 78.7 9.7e-15
NP_001020409 (OMIM: 602644) tetraspanin-4 isoform ( 238) 312 78.7 9.7e-15
NP_001020407 (OMIM: 602644) tetraspanin-4 isoform ( 238) 312 78.7 9.7e-15
NP_001020408 (OMIM: 602644) tetraspanin-4 isoform ( 238) 312 78.7 9.7e-15
NP_001020405 (OMIM: 602644) tetraspanin-4 isoform ( 238) 312 78.7 9.7e-15
NP_001020406 (OMIM: 602644) tetraspanin-4 isoform ( 238) 312 78.7 9.7e-15
NP_006666 (OMIM: 613137) tetraspanin-9 [Homo sapie ( 239) 292 74.2 2.1e-13
NP_001161792 (OMIM: 613137) tetraspanin-9 [Homo sa ( 239) 292 74.2 2.1e-13
NP_005714 (OMIM: 613136) tetraspanin-5 [Homo sapie ( 268) 288 73.3 4.3e-13
NP_004606 (OMIM: 300096,300210) tetraspanin-7 [Hom ( 249) 282 72.0 1e-12
NP_001771 (OMIM: 155740) CD63 antigen isoform A [H ( 238) 280 71.5 1.4e-12
NP_001244318 (OMIM: 155740) CD63 antigen isoform A ( 238) 280 71.5 1.4e-12
NP_001254627 (OMIM: 155740) CD63 antigen isoform A ( 238) 280 71.5 1.4e-12
NP_001244319 (OMIM: 155740) CD63 antigen isoform A ( 238) 280 71.5 1.4e-12
NP_001244320 (OMIM: 155740) CD63 antigen isoform A ( 238) 280 71.5 1.4e-12
NP_003261 (OMIM: 300191) tetraspanin-6 isoform a [ ( 245) 271 69.5 5.7e-12
NP_001020015 (OMIM: 176807,600623) CD82 antigen is ( 242) 270 69.3 6.5e-12
NP_001765 (OMIM: 151523) leukocyte antigen CD37 is ( 281) 266 68.5 1.4e-11
XP_005259492 (OMIM: 151523) PREDICTED: leukocyte a ( 365) 266 68.6 1.6e-11
XP_005250296 (OMIM: 613138,613310) PREDICTED: tetr ( 305) 260 67.1 3.6e-11
NP_036470 (OMIM: 613138,613310) tetraspanin-12 [Ho ( 305) 260 67.1 3.6e-11
XP_011514296 (OMIM: 613138,613310) PREDICTED: tetr ( 305) 260 67.1 3.6e-11
XP_016867401 (OMIM: 613138,613310) PREDICTED: tetr ( 305) 260 67.1 3.6e-11
XP_011514295 (OMIM: 613138,613310) PREDICTED: tetr ( 305) 260 67.1 3.6e-11
NP_005718 (OMIM: 613170) tetraspanin-1 [Homo sapie ( 241) 257 66.4 4.9e-11
XP_011538762 (OMIM: 613170) PREDICTED: tetraspanin ( 258) 257 66.4 5.1e-11
XP_011518369 (OMIM: 176807,600623) PREDICTED: CD82 ( 236) 250 64.8 1.4e-10
>>NP_001760 (OMIM: 143030) CD9 antigen isoform 1 [Homo s (228 aa)
initn: 1537 init1: 1537 opt: 1537 Z-score: 1865.6 bits: 352.4 E(85289): 3.6e-97
Smith-Waterman score: 1537; 100.0% identity (100.0% similar) in 228 aa overlap (1-228:1-228)
10 20 30 40 50 60
pF1KE1 MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNNSSFYTGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNNSSFYTGV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 YILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVIKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVIKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 VQEFYKDTYNKLKTKDEPQRETLKAIHYALNCCGLAGGVEQFISDICPKKDVLETFTVKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQEFYKDTYNKLKTKDEPQRETLKAIHYALNCCGLAGGVEQFISDICPKKDVLETFTVKS
130 140 150 160 170 180
190 200 210 220
pF1KE1 CPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRNREMV
::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRNREMV
190 200 210 220
>>NP_001317241 (OMIM: 143030) CD9 antigen isform 2 [Homo (159 aa)
initn: 1078 init1: 1078 opt: 1078 Z-score: 1313.2 bits: 249.7 E(85289): 2.1e-66
Smith-Waterman score: 1078; 100.0% identity (100.0% similar) in 159 aa overlap (70-228:1-159)
40 50 60 70 80 90
pF1KE1 QTKSIFEQETNNNNSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVI
::::::::::::::::::::::::::::::
NP_001 MMLVGFLGCCGAVQESQCMLGLFFGFLLVI
10 20 30
100 110 120 130 140 150
pF1KE1 FAIEIAAAIWGYSHKDEVIKEVQEFYKDTYNKLKTKDEPQRETLKAIHYALNCCGLAGGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAIEIAAAIWGYSHKDEVIKEVQEFYKDTYNKLKTKDEPQRETLKAIHYALNCCGLAGGV
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE1 EQFISDICPKKDVLETFTVKSCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSMILCC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQFISDICPKKDVLETFTVKSCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSMILCC
100 110 120 130 140 150
220
pF1KE1 AIRRNREMV
:::::::::
NP_001 AIRRNREMV
>>XP_005253871 (OMIM: 143030) PREDICTED: CD9 antigen iso (249 aa)
initn: 998 init1: 998 opt: 999 Z-score: 1215.2 bits: 232.2 E(85289): 6e-61
Smith-Waterman score: 999; 98.7% identity (99.3% similar) in 152 aa overlap (1-152:1-151)
10 20 30 40 50 60
pF1KE1 MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNNSSFYTGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNNSSFYTGV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 YILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVIKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVIKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 VQEFYKDTYNKLKTKDEPQRETLKAIHYALNCCGLAGGVEQFISDICPKKDVLETFTVKS
:::::::::::::::::::::::::::::. :
XP_005 VQEFYKDTYNKLKTKDEPQRETLKAIHYAV-CRLGKDTLLRFLRIVSAHRVLTAPDQCKH
130 140 150 160 170
190 200 210 220
pF1KE1 CPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRNREMV
XP_005 SNRLLTICFSHPHPCLLAVVELLWFGWGRGTVYLRHLPQEGRTRNLHREGKLRPGSWCPC
180 190 200 210 220 230
>>NP_004347 (OMIM: 186845,613496) CD81 antigen isoform 1 (236 aa)
initn: 714 init1: 335 opt: 722 Z-score: 880.9 bits: 170.3 E(85289): 2.5e-42
Smith-Waterman score: 722; 44.6% identity (78.4% similar) in 231 aa overlap (1-222:1-231)
10 20 30 40 50
pF1KE1 MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNNS--SFYT
: :.: ::::::::: :::.::::: ..:...:::: : :: ... : ... . .::.
NP_004 MGVEGCTKCIKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTNLLYLELGDKPAPNTFYV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 GVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVI
:.::::..::.::.:::::: ::.:::::.:: :: :...:: :.::.:::. .::..
NP_004 GIYILIAVGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQIA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 KEVQEFYKDTYNKLKTKDEPQ--RETLKAIHYALNCCG----LAGGVEQFISDICPK-KD
:.:..:: .. .. . :. . . ..:..: .:.::: : . . ...::. ..
NP_004 KDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSSTLTALTTSVLKNNLCPSGSN
130 140 150 160 170 180
180 190 200 210 220
pF1KE1 VLETFTVKSCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRNREMV
.. .. ..: . : ..:..:...:: ..: .::.::: ::.::.:::.::
NP_004 IISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMILSMVLCCGIRNSSVY
190 200 210 220 230
>>NP_005716 (OMIM: 613133) tetraspanin-2 isoform 1 [Homo (221 aa)
initn: 684 init1: 338 opt: 717 Z-score: 875.3 bits: 169.2 E(85289): 5.2e-42
Smith-Waterman score: 717; 48.2% identity (76.5% similar) in 226 aa overlap (4-228:5-221)
10 20 30 40 50
pF1KE1 MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNNSSFYTG
.:: .::::::.:::..::::: ::.:.:::.:: . : . .. . . ::.:
NP_005 MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGLWFRFGGAIKELSSEDKSPEY--FYVG
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 VYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVIK
.:.:.::::::: :::.:::::..::::.:: :: :::::: :........ : .:.
NP_005 LYVLVGAGALMMAVGFFGCCGAMRESQCVLGSFFTCLLVIFAAEVTTGVFAFIGKGVAIR
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 EVQEFYKDTYNKLKTKDEPQRE-TLKAIHYALNCCGLAGGVEQFISDICPKKDVLETFTV
.:: .:...:: ::. . . :: ..: ...::: .. :: .. ::: : .
NP_005 HVQTMYEEAYNDY-LKDRGKGNGTLITFHSTFQCCGKESS-EQ-VQPTCPK----ELLGH
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 KSCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRNREMV
:.: : :. ... :...:: :::::: . ::::::::.:::::: .:...
NP_005 KNCIDEIETIISVKLQLIGIVGIGIAGLTIFGMIFSMVLCCAIRNSRDVI
180 190 200 210 220
>>XP_011518794 (OMIM: 186845,613496) PREDICTED: CD81 ant (229 aa)
initn: 591 init1: 335 opt: 599 Z-score: 732.5 bits: 142.8 E(85289): 4.6e-34
Smith-Waterman score: 599; 41.1% identity (77.5% similar) in 209 aa overlap (23-222:16-224)
10 20 30 40 50
pF1KE1 MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNNS--SFYT
::: ..:...:::: : :: ... : ... . .::.
XP_011 MAPFVHARAGKTKAQLAGGVILGVALWLRHDPQTTNLLYLELGDKPAPNTFYV
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 GVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVI
:.::::..::.::.:::::: ::.:::::.:: :: :...:: :.::.:::. .::..
XP_011 GIYILIAVGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQIA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 KEVQEFYKDTYNKLKTKDEPQ--RETLKAIHYALNCCG----LAGGVEQFISDICPK-KD
:.:..:: .. .. . :. . . ..:..: .:.::: : . . ...::. ..
XP_011 KDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSSTLTALTTSVLKNNLCPSGSN
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 VLETFTVKSCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRNREMV
.. .. ..: . : ..:..:...:: ..: .::.::: ::.::.:::.::
XP_011 IISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMILSMVLCCGIRNSSVY
180 190 200 210 220
>>NP_001295245 (OMIM: 613133) tetraspanin-2 isoform 3 [H (193 aa)
initn: 638 init1: 338 opt: 533 Z-score: 653.8 bits: 128.0 E(85289): 1.1e-29
Smith-Waterman score: 582; 43.4% identity (68.6% similar) in 226 aa overlap (4-228:5-193)
10 20 30 40 50
pF1KE1 MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNNSSFYTG
.:: .::::::.:::..::::: ::.:.:::.:: . : . .. . . ::.:
NP_001 MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGLWFRFGGAIKELSSEDKSPEY--FYVG
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 VYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVIK
.:.:.::::::: :::.:::::..::::.:: :: :::::: :........ : .:.
NP_001 LYVLVGAGALMMAVGFFGCCGAMRESQCVLGSFFTCLLVIFAAEVTTGVFAFIGKGVAIR
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 EVQEFYKDTYNKLKTKDEPQRE-TLKAIHYALNCCGLAGGVEQFISDICPKKDVLETFTV
.:: .:...:: ::. . . :: ..: ...::: .. :: . :
NP_001 HVQTMYEEAYNDY-LKDRGKGNGTLITFHSTFQCCGKESS-EQ----VQP----------
120 130 140 150 160
180 190 200 210 220
pF1KE1 KSCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRNREMV
.:: ::.. .: ::::::::.:::::: .:...
NP_001 -TCP---KELLGHK---------------IFGMIFSMVLCCAIRNSRDVI
170 180 190
>>XP_016874087 (OMIM: 186845,613496) PREDICTED: CD81 ant (165 aa)
initn: 454 init1: 267 opt: 464 Z-score: 571.3 bits: 112.5 E(85289): 4.4e-25
Smith-Waterman score: 464; 40.6% identity (76.9% similar) in 160 aa overlap (70-222:1-160)
40 50 60 70 80 90
pF1KE1 QTKSIFEQETNNNNSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVI
::.:::::: ::.:::::.:: :: :...
XP_016 MMFVGFLGCYGAIQESQCLLGTFFTCLVIL
10 20 30
100 110 120 130 140 150
pF1KE1 FAIEIAAAIWGYSHKDEVIKEVQEFYKDTYNKLKTKDEPQ--RETLKAIHYALNCCG---
:: :.::.:::. .::.. :.:..:: .. .. . :. . . ..:..: .:.:::
XP_016 FACEVAAGIWGFVNKDQIAKDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSST
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE1 -LAGGVEQFISDICPK-KDVLETFTVKSCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMI
: . . ...::. .... .. ..: . : ..:..:...:: ..: .::.::: ::
XP_016 LTALTTSVLKNNLCPSGSNIISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMI
100 110 120 130 140 150
220
pF1KE1 FSMILCCAIRRNREMV
.::.:::.::
XP_016 LSMVLCCGIRNSSVY
160
>>NP_001284578 (OMIM: 186845,613496) CD81 antigen isofor (165 aa)
initn: 454 init1: 267 opt: 464 Z-score: 571.3 bits: 112.5 E(85289): 4.4e-25
Smith-Waterman score: 464; 40.6% identity (76.9% similar) in 160 aa overlap (70-222:1-160)
40 50 60 70 80 90
pF1KE1 QTKSIFEQETNNNNSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVI
::.:::::: ::.:::::.:: :: :...
NP_001 MMFVGFLGCYGAIQESQCLLGTFFTCLVIL
10 20 30
100 110 120 130 140 150
pF1KE1 FAIEIAAAIWGYSHKDEVIKEVQEFYKDTYNKLKTKDEPQ--RETLKAIHYALNCCG---
:: :.::.:::. .::.. :.:..:: .. .. . :. . . ..:..: .:.:::
NP_001 FACEVAAGIWGFVNKDQIAKDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSST
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE1 -LAGGVEQFISDICPK-KDVLETFTVKSCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMI
: . . ...::. .... .. ..: . : ..:..:...:: ..: .::.::: ::
NP_001 LTALTTSVLKNNLCPSGSNIISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMI
100 110 120 130 140 150
220
pF1KE1 FSMILCCAIRRNREMV
.::.:::.::
NP_001 LSMVLCCGIRNSSVY
160
>>XP_006719646 (OMIM: 600769) PREDICTED: tetraspanin-8 i (237 aa)
initn: 272 init1: 239 opt: 421 Z-score: 517.3 bits: 103.0 E(85289): 4.5e-22
Smith-Waterman score: 505; 35.9% identity (69.7% similar) in 234 aa overlap (5-221:3-234)
10 20 30 40 50 60
pF1KE1 MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNNSSFYTGV
: . :::: .: :::.::: :: .::...:.: ......:: .: . .:: :..:
XP_006 MAGVSACIKYSMFTFNFLFWLCGILILALAIWVRVSNDSQAIFGSE--DVGSSSYVAV
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 YILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVIKE
:::..::..:..::::::::..::.::: ::: ::.:. ...:..: : :.. .
XP_006 DILIAVGAIIMILGFLGCCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKSKSDRI
60 70 80 90 100 110
130 140 150 160
pF1KE1 VQEFYKDTYNKLKTKDEPQRETLKAI---HYALNCCGLAGGVE------QFISDICP---
:.: .. . :.. : ... .:: . ..::::..:. : ..:
XP_006 VNETLYENTKLLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGNNFQHYPELCACLD
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 KKDVLETFTVK-----SCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRR
:. .... : .: . ::. . ... :. ....:.::. :.:..:::.: : :
XP_006 KQRPCQSYNGKQVYKETCISFIKDFLAKNLIIVIGISFGLAVIEILGLVFSMVLYCQIGN
180 190 200 210 220 230
pF1KE1 NREMV
XP_006 K
228 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 01:45:11 2016 done: Mon Nov 7 01:45:12 2016
Total Scan time: 5.300 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]