Result of FASTA (ccds) for
pFN21AE1542
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1542, 196 aa
1>>>pF1KE1542 196 - 196 aa - 196 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0143+/-0.000907; mu= 9.5131+/- 0.054
mean_var=71.5261+/-14.579, 0's: 0 Z-trim(105.3): 53 B-trim: 3 in 1/49
Lambda= 0.151650
statistics sampled from 8313 (8366) to 8313 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.646), E-opt: 0.2 (0.257), width: 16
Scan time: 1.950
The best scores are: opt bits E(32554)
CCDS1375.2 RGS1 gene_id:5996|Hs108|chr1 ( 209) 1284 289.9 7.1e-79
CCDS41448.1 RGS21 gene_id:431704|Hs108|chr1 ( 152) 519 122.5 1.3e-28
CCDS6798.1 RGS3 gene_id:5998|Hs108|chr9 ( 519) 494 117.2 1.7e-26
CCDS6797.1 RGS3 gene_id:5998|Hs108|chr9 ( 917) 494 117.3 2.9e-26
CCDS43869.1 RGS3 gene_id:5998|Hs108|chr9 (1198) 494 117.3 3.7e-26
CCDS65111.1 RGS3 gene_id:5998|Hs108|chr9 ( 591) 484 115.0 8.9e-26
CCDS41443.1 RGS8 gene_id:85397|Hs108|chr1 ( 180) 470 111.8 2.5e-25
CCDS1349.1 RGS8 gene_id:85397|Hs108|chr1 ( 198) 470 111.8 2.7e-25
CCDS35114.1 RGS3 gene_id:5998|Hs108|chr9 ( 311) 472 112.3 3.1e-25
CCDS1376.1 RGS13 gene_id:6003|Hs108|chr1 ( 159) 465 110.7 4.8e-25
CCDS1374.1 RGS18 gene_id:64407|Hs108|chr1 ( 235) 456 108.8 2.7e-24
CCDS44272.1 RGS4 gene_id:5999|Hs108|chr1 ( 187) 454 108.3 2.9e-24
CCDS1243.1 RGS4 gene_id:5999|Hs108|chr1 ( 205) 454 108.3 3.2e-24
CCDS1244.1 RGS5 gene_id:8490|Hs108|chr1 ( 181) 453 108.1 3.3e-24
CCDS1377.1 RGS2 gene_id:5997|Hs108|chr1 ( 211) 452 107.9 4.5e-24
CCDS44270.1 RGS4 gene_id:5999|Hs108|chr1 ( 302) 454 108.4 4.6e-24
CCDS58041.1 RGS5 gene_id:8490|Hs108|chr1 ( 185) 435 104.2 5.2e-23
CCDS1348.1 RGS16 gene_id:6004|Hs108|chr1 ( 202) 424 101.8 3e-22
CCDS6156.1 RGS20 gene_id:8601|Hs108|chr8 ( 241) 385 93.3 1.3e-19
CCDS69482.1 RGS20 gene_id:8601|Hs108|chr8 ( 273) 385 93.3 1.5e-19
CCDS13555.1 RGS19 gene_id:10287|Hs108|chr20 ( 217) 382 92.6 1.9e-19
CCDS6155.1 RGS20 gene_id:8601|Hs108|chr8 ( 388) 385 93.3 2e-19
CCDS5244.1 RGS17 gene_id:26575|Hs108|chr6 ( 210) 380 92.1 2.5e-19
CCDS41572.1 RGS10 gene_id:6001|Hs108|chr10 ( 167) 364 88.6 2.3e-18
CCDS31294.1 RGS10 gene_id:6001|Hs108|chr10 ( 181) 364 88.6 2.4e-18
CCDS45764.1 RGS9 gene_id:8787|Hs108|chr17 ( 671) 339 83.3 3.5e-16
CCDS42373.1 RGS9 gene_id:8787|Hs108|chr17 ( 674) 339 83.3 3.6e-16
CCDS60457.1 RGS7 gene_id:6000|Hs108|chr1 ( 424) 334 82.2 5e-16
CCDS10403.1 RGS11 gene_id:8786|Hs108|chr16 ( 446) 334 82.2 5.2e-16
CCDS66884.1 RGS11 gene_id:8786|Hs108|chr16 ( 456) 334 82.2 5.3e-16
CCDS42088.1 RGS11 gene_id:8786|Hs108|chr16 ( 467) 334 82.2 5.4e-16
CCDS60458.1 RGS7 gene_id:6000|Hs108|chr1 ( 469) 334 82.2 5.5e-16
CCDS60459.1 RGS7 gene_id:6000|Hs108|chr1 ( 477) 334 82.2 5.5e-16
CCDS31071.1 RGS7 gene_id:6000|Hs108|chr1 ( 487) 334 82.2 5.7e-16
CCDS73655.1 RGS6 gene_id:9628|Hs108|chr14 ( 437) 319 78.9 5e-15
CCDS9808.1 RGS6 gene_id:9628|Hs108|chr14 ( 472) 319 78.9 5.3e-15
CCDS55924.1 RGS6 gene_id:9628|Hs108|chr14 ( 490) 319 78.9 5.5e-15
CCDS3368.1 RGS12 gene_id:6002|Hs108|chr4 ( 799) 317 78.5 1.2e-14
CCDS3367.1 RGS12 gene_id:6002|Hs108|chr4 (1376) 308 76.6 7.5e-14
CCDS3366.1 RGS12 gene_id:6002|Hs108|chr4 (1447) 308 76.6 7.9e-14
CCDS43405.1 RGS14 gene_id:10636|Hs108|chr5 ( 566) 280 70.4 2.3e-12
>>CCDS1375.2 RGS1 gene_id:5996|Hs108|chr1 (209 aa)
initn: 1284 init1: 1284 opt: 1284 Z-score: 1529.6 bits: 289.9 E(32554): 7.1e-79
Smith-Waterman score: 1284; 100.0% identity (100.0% similar) in 196 aa overlap (1-196:14-209)
10 20 30 40
pF1KE1 MPGMFFSANPKELKGTTHSLLDDKMQKRRPKTFGMDMKAYLRSMIPH
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MRAAAISTPKLDKMPGMFFSANPKELKGTTHSLLDDKMQKRRPKTFGMDMKAYLRSMIPH
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 LESGMKSSKSKDVLSAAEVMQWSQSLEKLLANQTGQNVFGSFLKSEFSEENIEFWLACED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LESGMKSSKSKDVLSAAEVMQWSQSLEKLLANQTGQNVFGSFLKSEFSEENIEFWLACED
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE1 YKKTESDLLPCKAEEIYKAFVHSDAAKQINIDFRTRESTAKKIKAPTPTCFDEAQKVIYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YKKTESDLLPCKAEEIYKAFVHSDAAKQINIDFRTRESTAKKIKAPTPTCFDEAQKVIYT
130 140 150 160 170 180
170 180 190
pF1KE1 LMEKDSYPRFLKSDIYLNLLNDLQANSLK
:::::::::::::::::::::::::::::
CCDS13 LMEKDSYPRFLKSDIYLNLLNDLQANSLK
190 200
>>CCDS41448.1 RGS21 gene_id:431704|Hs108|chr1 (152 aa)
initn: 534 init1: 288 opt: 519 Z-score: 627.3 bits: 122.5 E(32554): 1.3e-28
Smith-Waterman score: 519; 59.0% identity (81.3% similar) in 134 aa overlap (64-196:13-146)
40 50 60 70 80 90
pF1KE1 GMDMKAYLRSMIPHLESGMKSSKSKDVLSAAEVMQWSQSLEKLLANQTGQNVFGSFLKSE
::.: ::.... :::::.: ..: :::::
CCDS41 MPVKCCFYRSPTAETMTWSENMDTLLANQAGLDAFRIFLKSE
10 20 30 40
100 110 120 130 140 150
pF1KE1 FSEENIEFWLACEDYKKTES-DLLPCKAEEIYKAFVHSDAAKQINIDFRTRESTAKKIKA
:::::.::::::::.:::.. : . ::. ::. :...:: :.::::: ::. .:.:
CCDS41 FSEENVEFWLACEDFKKTKNADKIASKAKMIYSEFIEADAPKEINIDFGTRDLISKNIAE
50 60 70 80 90 100
160 170 180 190
pF1KE1 PTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK
:: :::::::.:: :: :::.::::::.:: .:.:. :. . :
CCDS41 PTLKCFDEAQKLIYCLMAKDSFPRFLKSEIYKKLVNSQQVPNHKKWLPFL
110 120 130 140 150
>>CCDS6798.1 RGS3 gene_id:5998|Hs108|chr9 (519 aa)
initn: 473 init1: 244 opt: 494 Z-score: 589.0 bits: 117.2 E(32554): 1.7e-26
Smith-Waterman score: 494; 42.5% identity (70.5% similar) in 193 aa overlap (4-188:319-511)
10 20 30
pF1KE1 MPGMFFSANPKELKGTTHSLLDDKMQKRRPKTF
.::... : . : . :. .::. :..
CCDS67 EGAASTWGMPSPSTLKKELGRNGGSMHHLSLFFTGHRKMSGADTVGDDDEASRKRKSKNL
290 300 310 320 330 340
40 50 60 70 80
pF1KE1 GMDMKAYL-----RSMIPHLESGMKSSKSKDVL--SAAEVMQWSQSLEKLLANQTGQNVF
. ::: : :. : . :..: . .. :...:..::::::... : ::
CCDS67 AKDMKNKLGIFRRRNESPGAPPAGKADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVF
350 360 370 380 390 400
90 100 110 120 130 140
pF1KE1 GSFLKSEFSEENIEFWLACEDYKKTESDL-LPCKAEEIYKAFVHSDAAKQINIDFRTRES
.::..::::::.::::::::.::..:. . ::..:. .. .: :..:.: :::
CCDS67 QAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTREH
410 420 430 440 450 460
150 160 170 180 190
pF1KE1 TAKKIKAPTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK
: .... : ::: ::: :. :::::::::::.::.::.:.:
CCDS67 TKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLINQKKMSPPL
470 480 490 500 510
>>CCDS6797.1 RGS3 gene_id:5998|Hs108|chr9 (917 aa)
initn: 473 init1: 244 opt: 494 Z-score: 584.9 bits: 117.3 E(32554): 2.9e-26
Smith-Waterman score: 494; 42.5% identity (70.5% similar) in 193 aa overlap (4-188:717-909)
10 20 30
pF1KE1 MPGMFFSANPKELKGTTHSLLDDKMQKRRPKTF
.::... : . : . :. .::. :..
CCDS67 EGAASTWGMPSPSTLKKELGRNGGSMHHLSLFFTGHRKMSGADTVGDDDEASRKRKSKNL
690 700 710 720 730 740
40 50 60 70 80
pF1KE1 GMDMKAYL-----RSMIPHLESGMKSSKSKDVL--SAAEVMQWSQSLEKLLANQTGQNVF
. ::: : :. : . :..: . .. :...:..::::::... : ::
CCDS67 AKDMKNKLGIFRRRNESPGAPPAGKADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVF
750 760 770 780 790 800
90 100 110 120 130 140
pF1KE1 GSFLKSEFSEENIEFWLACEDYKKTESDL-LPCKAEEIYKAFVHSDAAKQINIDFRTRES
.::..::::::.::::::::.::..:. . ::..:. .. .: :..:.: :::
CCDS67 QAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTREH
810 820 830 840 850 860
150 160 170 180 190
pF1KE1 TAKKIKAPTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK
: .... : ::: ::: :. :::::::::::.::.::.:.:
CCDS67 TKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLINQKKMSPPL
870 880 890 900 910
>>CCDS43869.1 RGS3 gene_id:5998|Hs108|chr9 (1198 aa)
initn: 473 init1: 244 opt: 494 Z-score: 583.0 bits: 117.3 E(32554): 3.7e-26
Smith-Waterman score: 494; 42.5% identity (70.5% similar) in 193 aa overlap (4-188:998-1190)
10 20 30
pF1KE1 MPGMFFSANPKELKGTTHSLLDDKMQKRRPKTF
.::... : . : . :. .::. :..
CCDS43 EGAASTWGMPSPSTLKKELGRNGGSMHHLSLFFTGHRKMSGADTVGDDDEASRKRKSKNL
970 980 990 1000 1010 1020
40 50 60 70 80
pF1KE1 GMDMKAYL-----RSMIPHLESGMKSSKSKDVL--SAAEVMQWSQSLEKLLANQTGQNVF
. ::: : :. : . :..: . .. :...:..::::::... : ::
CCDS43 AKDMKNKLGIFRRRNESPGAPPAGKADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVF
1030 1040 1050 1060 1070 1080
90 100 110 120 130 140
pF1KE1 GSFLKSEFSEENIEFWLACEDYKKTESDL-LPCKAEEIYKAFVHSDAAKQINIDFRTRES
.::..::::::.::::::::.::..:. . ::..:. .. .: :..:.: :::
CCDS43 QAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTREH
1090 1100 1110 1120 1130 1140
150 160 170 180 190
pF1KE1 TAKKIKAPTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK
: .... : ::: ::: :. :::::::::::.::.::.:.:
CCDS43 TKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLINQKKMSPPL
1150 1160 1170 1180 1190
>>CCDS65111.1 RGS3 gene_id:5998|Hs108|chr9 (591 aa)
initn: 463 init1: 244 opt: 484 Z-score: 576.2 bits: 115.0 E(32554): 8.9e-26
Smith-Waterman score: 485; 41.8% identity (70.1% similar) in 194 aa overlap (6-188:390-583)
10 20 30
pF1KE1 MPGMFFSANPKELKGTTHSLL---DDKMQKRRPKT
..:.: . : . . . :. .::. :.
CCDS65 ECLFTLEAHSQEQKKRVCWCLSENIAKQQQLAASPPDSKMSGADTVGDDDEASRKRKSKN
360 370 380 390 400 410
40 50 60 70 80
pF1KE1 FGMDMKAYL-----RSMIPHLESGMKSSKSKDVL--SAAEVMQWSQSLEKLLANQTGQNV
.. ::: : :. : . :..: . .. :...:..::::::... : :
CCDS65 LAKDMKNKLGIFRRRNESPGAPPAGKADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAV
420 430 440 450 460 470
90 100 110 120 130 140
pF1KE1 FGSFLKSEFSEENIEFWLACEDYKKTESDL-LPCKAEEIYKAFVHSDAAKQINIDFRTRE
: .::..::::::.::::::::.::..:. . ::..:. .. .: :..:.: :::
CCDS65 FQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTRE
480 490 500 510 520 530
150 160 170 180 190
pF1KE1 STAKKIKAPTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK
: .... : ::: ::: :. :::::::::::.::.::.:.:
CCDS65 HTKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLINQKKMSPPL
540 550 560 570 580 590
>>CCDS41443.1 RGS8 gene_id:85397|Hs108|chr1 (180 aa)
initn: 467 init1: 276 opt: 470 Z-score: 568.1 bits: 111.8 E(32554): 2.5e-25
Smith-Waterman score: 470; 50.0% identity (80.7% similar) in 140 aa overlap (53-191:37-176)
30 40 50 60 70 80
pF1KE1 DKMQKRRPKTFGMDMKAYLRSMIPHLESGMKSSKSKDVLSAAEVMQWSQSLEKLLANQTG
: ... ::. :. .:..:.. ::... :
CCDS41 PRRNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYG
10 20 30 40 50 60
90 100 110 120 130 140
pF1KE1 QNVFGSFLKSEFSEENIEFWLACEDYKKTESDL-LPCKAEEIYKAFVHSDAAKQINIDFR
.: .:::.::::::.:::::::..:::.: : ::..:.. :: .: ...::::.
CCDS41 VAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQ
70 80 90 100 110 120
150 160 170 180 190
pF1KE1 TRESTAKKIKAPTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK
:::.: :... :. ::::.:: ...:::::::::::.: .::.::.. :
CCDS41 TREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQSQRRLS
130 140 150 160 170 180
>>CCDS1349.1 RGS8 gene_id:85397|Hs108|chr1 (198 aa)
initn: 467 init1: 276 opt: 470 Z-score: 567.5 bits: 111.8 E(32554): 2.7e-25
Smith-Waterman score: 470; 50.0% identity (80.7% similar) in 140 aa overlap (53-191:55-194)
30 40 50 60 70 80
pF1KE1 DKMQKRRPKTFGMDMKAYLRSMIPHLESGMKSSKSKDVLSAAEVMQWSQSLEKLLANQTG
: ... ::. :. .:..:.. ::... :
CCDS13 QRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYG
30 40 50 60 70 80
90 100 110 120 130 140
pF1KE1 QNVFGSFLKSEFSEENIEFWLACEDYKKTESDL-LPCKAEEIYKAFVHSDAAKQINIDFR
.: .:::.::::::.:::::::..:::.: : ::..:.. :: .: ...::::.
CCDS13 VAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQ
90 100 110 120 130 140
150 160 170 180 190
pF1KE1 TRESTAKKIKAPTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK
:::.: :... :. ::::.:: ...:::::::::::.: .::.::.. :
CCDS13 TREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQSQRRLS
150 160 170 180 190
>>CCDS35114.1 RGS3 gene_id:5998|Hs108|chr9 (311 aa)
initn: 426 init1: 244 opt: 472 Z-score: 566.6 bits: 112.3 E(32554): 3.1e-25
Smith-Waterman score: 472; 41.7% identity (68.4% similar) in 187 aa overlap (10-188:117-303)
10 20 30
pF1KE1 MPGMFFSANPKELKGTTHSLLDDKMQKRRPKTFGMDMKA
: :. . . ..:.:. . :::
CCDS35 VAARCPGRGVGDRSQSGASYRPICGPKVGGPTEMLRGMYLTRNGNLQRRHTMKEAKDMKN
90 100 110 120 130 140
40 50 60 70 80 90
pF1KE1 YL-----RSMIPHLESGMKSSKSKDVL--SAAEVMQWSQSLEKLLANQTGQNVFGSFLKS
: :. : . :..: . .. :...:..::::::... : :: .::..
CCDS35 KLGIFRRRNESPGAPPAGKADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVFQAFLRT
150 160 170 180 190 200
100 110 120 130 140 150
pF1KE1 EFSEENIEFWLACEDYKKTESDL-LPCKAEEIYKAFVHSDAAKQINIDFRTRESTAKKIK
::::::.::::::::.::..:. . ::..:. .. .: :..:.: ::: : ...
CCDS35 EFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTREHTKDNLQ
210 220 230 240 250 260
160 170 180 190
pF1KE1 APTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK
. : ::: ::: :. :::::::::::.::.::.:.:
CCDS35 SVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLINQKKMSPPL
270 280 290 300 310
>>CCDS1376.1 RGS13 gene_id:6003|Hs108|chr1 (159 aa)
initn: 454 init1: 268 opt: 465 Z-score: 563.1 bits: 110.7 E(32554): 4.8e-25
Smith-Waterman score: 465; 46.2% identity (77.6% similar) in 143 aa overlap (53-194:15-157)
30 40 50 60 70 80
pF1KE1 DKMQKRRPKTFGMDMKAYLRSMIPHLESGMKSSKSKDVLSAAEVMQWSQSLEKLLANQTG
.:.. . :. ::.::.::.:.:.:.. :
CCDS13 MSRRNCWICKMCRDESKRPPSNLTLEEVLQWAQSFENLMATKYG
10 20 30 40
90 100 110 120 130 140
pF1KE1 QNVFGSFLKSEFSEENIEFWLACEDYKKTESDLLP-CKAEEIYKAFVHSDAAKQINIDFR
:....:: : :.:::.::.::: ::: : .:...:: ... .. ..::::
CCDS13 PVVYAAYLKMEHSDENIQFWMACETYKKIASRWSRISRAKKLYKIYIQPQSPREINIDSS
50 60 70 80 90 100
150 160 170 180 190
pF1KE1 TRESTAKKIKAPTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK
:::. ..:. :: :::.::::..: ::.:::::::::..: .::. .:.:.
CCDS13 TRETIIRNIQEPTETCFEEAQKIVYMHMERDSYPRFLKSEMYQKLLKTMQSNNSF
110 120 130 140 150
196 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 22:54:13 2016 done: Sun Nov 6 22:54:13 2016
Total Scan time: 1.950 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]