Result of FASTA (omim) for
pFN21AE1533
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1533, 771 aa
1>>>pF1KE1533 771 - 771 aa - 771 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.8811+/-0.000483; mu= -1.3566+/- 0.030
mean_var=263.9716+/-53.852, 0's: 0 Z-trim(117.1): 24 B-trim: 386 in 1/56
Lambda= 0.078940
statistics sampled from 28871 (28891) to 28871 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.681), E-opt: 0.2 (0.339), width: 16
Scan time: 14.640
The best scores are: opt bits E(85289)
NP_006640 (OMIM: 300508) U3 small nucleolar RNA-as ( 771) 4955 578.6 3.5e-164
NP_067677 (OMIM: 608969) U3 small nucleolar RNA-as ( 766) 4450 521.0 7.1e-147
NP_001159693 (OMIM: 300508) U3 small nucleolar RNA ( 719) 3848 452.5 3e-126
XP_016884726 (OMIM: 300508) PREDICTED: U3 small nu ( 627) 3846 452.2 3.1e-126
XP_016884727 (OMIM: 300508) PREDICTED: U3 small nu ( 449) 2951 350.2 1.2e-95
>>NP_006640 (OMIM: 300508) U3 small nucleolar RNA-associ (771 aa)
initn: 4955 init1: 4955 opt: 4955 Z-score: 3068.6 bits: 578.6 E(85289): 3.5e-164
Smith-Waterman score: 4955; 100.0% identity (100.0% similar) in 771 aa overlap (1-771:1-771)
10 20 30 40 50 60
pF1KE1 MTANRLAESLLALSQQEELADLPKDYLLSESEDEGDNDGERKHQKLLEAISSLDGKNRRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MTANRLAESLLALSQQEELADLPKDYLLSESEDEGDNDGERKHQKLLEAISSLDGKNRRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LAERSEASLKVSEFNVSSEGSGEKLVLADLLEPVKTSSSLATVKKQLSRVKSKKTVELPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LAERSEASLKVSEFNVSSEGSGEKLVLADLLEPVKTSSSLATVKKQLSRVKSKKTVELPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 NKEEIERIHREVAFNKTAQVLSKWDPVVLKNRQAEQLVFPLEKEEPAIAPIEHVLSGWKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NKEEIERIHREVAFNKTAQVLSKWDPVVLKNRQAEQLVFPLEKEEPAIAPIEHVLSGWKA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 RTPLEQEIFNLLHKNKQPVTDPLLTPVEKASLRAMSLEEAKMRRAELQRARALQSYYEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RTPLEQEIFNLLHKNKQPVTDPLLTPVEKASLRAMSLEEAKMRRAELQRARALQSYYEAK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 ARREKKIKSKKYHKVVKKGKAKKALKEFEQLRKVNPAAALEELEKIEKARMMERMSLKHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 ARREKKIKSKKYHKVVKKGKAKKALKEFEQLRKVNPAAALEELEKIEKARMMERMSLKHQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 NSGKWAKSKAIMAKYDLEARQAMQEQLSKNKELTQKLQVASESEEEEGGTEDVEELLVPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NSGKWAKSKAIMAKYDLEARQAMQEQLSKNKELTQKLQVASESEEEEGGTEDVEELLVPD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 VVNEVQMNADGPNPWMLRSCTSDTKEAATQEDPEQLPELEAHGVSESEGEERPVAEEEIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VVNEVQMNADGPNPWMLRSCTSDTKEAATQEDPEQLPELEAHGVSESEGEERPVAEEEIL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 LREFEERRSLRKRSELSQDAEPAGSQETKDSGSQEVLSELRVLSQKLKENHQSRKQKASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LREFEERRSLRKRSELSQDAEPAGSQETKDSGSQEVLSELRVLSQKLKENHQSRKQKASS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 EGTIPQVQREEPAPEEEEPLLLQRPERVQTLEELEELGKEECFQNKELPRPVLEGQQSER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 EGTIPQVQREEPAPEEEEPLLLQRPERVQTLEELEELGKEECFQNKELPRPVLEGQQSER
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE1 TPNNRPDAPKEKKKKEQMIDLQNLLTTQSPSVKSLAVPTIEELEDEEERNHRQMIKEAFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TPNNRPDAPKEKKKKEQMIDLQNLLTTQSPSVKSLAVPTIEELEDEEERNHRQMIKEAFA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE1 GDDVIRDFLKEKREAVEASKPKDVDLTLPGWGEWGGVGLKPSAKKRRRFLIKAPEGPPRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GDDVIRDFLKEKREAVEASKPKDVDLTLPGWGEWGGVGLKPSAKKRRRFLIKAPEGPPRK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE1 DKNLPNVIINEKRNIHAAAHQVRVLPYPFTHHWQFERTIQTPIGSTWNTQRAFQKLTTPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DKNLPNVIINEKRNIHAAAHQVRVLPYPFTHHWQFERTIQTPIGSTWNTQRAFQKLTTPK
670 680 690 700 710 720
730 740 750 760 770
pF1KE1 VVTKPGHIINPIKAEDVGYRSSSRSDLSVIQRNPKRITTRHKKQLKKCSVD
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VVTKPGHIINPIKAEDVGYRSSSRSDLSVIQRNPKRITTRHKKQLKKCSVD
730 740 750 760 770
>>NP_067677 (OMIM: 608969) U3 small nucleolar RNA-associ (766 aa)
initn: 4378 init1: 3026 opt: 4450 Z-score: 2757.8 bits: 521.0 E(85289): 7.1e-147
Smith-Waterman score: 4450; 90.2% identity (97.9% similar) in 767 aa overlap (1-766:1-765)
10 20 30 40 50 60
pF1KE1 MTANRLAESLLALSQQEELADLPKDYLLSESEDEGDNDGERKHQKLLEAISSLDGKNRRK
:..:..::.: :::.::::.::::.: :::.:::::.::::::::::::: :::::::::
NP_067 MNVNQVAENL-ALSHQEELVDLPKNYPLSENEDEGDSDGERKHQKLLEAIISLDGKNRRK
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 LAERSEASLKVSEFNVSSEGSGEKLVLADLLEPVKTSSSLATVKKQLSRVKSKKTVELPL
::::::::::::::.:::::::::: :::::::::::::::::::::.::::::.:::::
NP_067 LAERSEASLKVSEFSVSSEGSGEKLGLADLLEPVKTSSSLATVKKQLNRVKSKKVVELPL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 NKEEIERIHREVAFNKTAQVLSKWDPVVLKNRQAEQLVFPLEKEEPAIAPIEHVLSGWKA
:::.::.:::::::.::.::::::::..:::.::::::::: ::.::::::::.::::::
NP_067 NKEKIEQIHREVAFSKTSQVLSKWDPIILKNQQAEQLVFPLGKEQPAIAPIEHALSGWKA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 RTPLEQEIFNLLHKNKQPVTDPLLTPVEKASLRAMSLEEAKMRRAELQRARALQSYYEAK
::::::::::::::::::::::::::.:::::.:::::::::.:::::::::::::::::
NP_067 RTPLEQEIFNLLHKNKQPVTDPLLTPMEKASLQAMSLEEAKMHRAELQRARALQSYYEAK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE1 ARREKKIKSKKYHKVVKKGKAKKALKEFEQLRKVNPAAALEELEKIEKARMMERMSLKHQ
::.::::::::::::::::::::::::::::.::::..::::.::::.::::::::::::
NP_067 ARKEKKIKSKKYHKVVKKGKAKKALKEFEQLQKVNPTVALEEMEKIENARMMERMSLKHQ
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE1 NSGKWAKSKAIMAKYDLEARQAMQEQLSKNKELTQKLQVASESEEEEGGTEDVEELLVPD
:::::::::::::::::::::::::::.::::::::::::::::::::::: :::::::
NP_067 NSGKWAKSKAIMAKYDLEARQAMQEQLAKNKELTQKLQVASESEEEEGGTE-VEELLVPH
300 310 320 330 340 350
370 380 390 400 410 420
pF1KE1 VVNEVQMNADGPNPWMLRSCTSDTKEAATQEDPEQLPELEAHGVSESEGEERPVAEEEIL
:.::::::.:::::::.::::::::::::::::::.::: :: :: ::.:::::::::::
NP_067 VANEVQMNVDGPNPWMFRSCTSDTKEAATQEDPEQVPELAAHEVSASEAEERPVAEEEIL
360 370 380 390 400 410
430 440 450 460 470 480
pF1KE1 LREFEERRSLRKRSELSQDAEPAGSQETKDSGSQEVLSELRVLSQKLKENHQSRKQKASS
:::::::.::::::::.::::::.:::::::.:::::::::.:::::::.::::::::::
NP_067 LREFEERQSLRKRSELNQDAEPASSQETKDSSSQEVLSELRALSQKLKEKHQSRKQKASS
420 430 440 450 460 470
490 500 510 520 530 540
pF1KE1 EGTIPQVQREEPAPEEEEPLLLQRPERVQTLEELEELGKEECFQNKELPRPVLEGQQSER
:::.:::::::::::: ::::::: :::::::::::::::.:::::::::::::::::::
NP_067 EGTVPQVQREEPAPEEAEPLLLQRSERVQTLEELEELGKEDCFQNKELPRPVLEGQQSER
480 490 500 510 520 530
550 560 570 580 590
pF1KE1 TPNNRPDAPKEKKKKEQMIDLQNLLTTQSPSVKSLAVPTI-EELEDEEERNHRQMIKEAF
:::::::::::::.:::.:.:::.::::::::.::::::: :::::::::..::::::::
NP_067 TPNNRPDAPKEKKEKEQLINLQNFLTTQSPSVRSLAVPTIIEELEDEEERDQRQMIKEAF
540 550 560 570 580 590
600 610 620 630 640 650
pF1KE1 AGDDVIRDFLKEKREAVEASKPKDVDLTLPGWGEWGGVGLKPSAKKRRRFLIKAPEGPPR
::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::
NP_067 AGDDVIRDFLKEKREAVEASKPKDVDLTLPGWGEWGGVGLKPSAKKRRQFLIKAPEGPPR
600 610 620 630 640 650
660 670 680 690 700 710
pF1KE1 KDKNLPNVIINEKRNIHAAAHQVRVLPYPFTHHWQFERTIQTPIGSTWNTQRAFQKLTTP
::::::::::.::::::::::::.::::::::: ::::::::::::::::::::::::::
NP_067 KDKNLPNVIISEKRNIHAAAHQVQVLPYPFTHHRQFERTIQTPIGSTWNTQRAFQKLTTP
660 670 680 690 700 710
720 730 740 750 760 770
pF1KE1 KVVTKPGHIINPIKAEDVGYRSSSRSDLSVIQRNPKRITTRHKKQLKKCSVD
::::::::::.:::::::::.::::::: :::::::::::::.:. :
NP_067 KVVTKPGHIIKPIKAEDVGYQSSSRSDLPVIQRNPKRITTRHNKEEKL
720 730 740 750 760
>>NP_001159693 (OMIM: 300508) U3 small nucleolar RNA-ass (719 aa)
initn: 3848 init1: 3848 opt: 3848 Z-score: 2387.7 bits: 452.5 E(85289): 3e-126
Smith-Waterman score: 4494; 93.3% identity (93.3% similar) in 771 aa overlap (1-771:1-719)
10 20 30 40 50 60
pF1KE1 MTANRLAESLLALSQQEELADLPKDYLLSESEDEGDNDGERKHQKLLEAISSLDGKNRRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTANRLAESLLALSQQEELADLPKDYLLSESEDEGDNDGERKHQKLLEAISSLDGKNRRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LAERSEASLKVSEFNVSSEGSGEKLVLADLLEPVKTSSSLATVKKQLSRVKSKKTVELPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAERSEASLKVSEFNVSSEGSGEKLVLADLLEPVKTSSSLATVKKQLSRVKSKKTVELPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 NKEEIERIHREVAFNKTAQVLSKWDPVVLKNRQAEQLVFPLEKEEPAIAPIEHVLSGWKA
::::::: :
NP_001 NKEEIER----------------------------------------------------A
190 200 210 220 230 240
pF1KE1 RTPLEQEIFNLLHKNKQPVTDPLLTPVEKASLRAMSLEEAKMRRAELQRARALQSYYEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTPLEQEIFNLLHKNKQPVTDPLLTPVEKASLRAMSLEEAKMRRAELQRARALQSYYEAK
130 140 150 160 170 180
250 260 270 280 290 300
pF1KE1 ARREKKIKSKKYHKVVKKGKAKKALKEFEQLRKVNPAAALEELEKIEKARMMERMSLKHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARREKKIKSKKYHKVVKKGKAKKALKEFEQLRKVNPAAALEELEKIEKARMMERMSLKHQ
190 200 210 220 230 240
310 320 330 340 350 360
pF1KE1 NSGKWAKSKAIMAKYDLEARQAMQEQLSKNKELTQKLQVASESEEEEGGTEDVEELLVPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSGKWAKSKAIMAKYDLEARQAMQEQLSKNKELTQKLQVASESEEEEGGTEDVEELLVPD
250 260 270 280 290 300
370 380 390 400 410 420
pF1KE1 VVNEVQMNADGPNPWMLRSCTSDTKEAATQEDPEQLPELEAHGVSESEGEERPVAEEEIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVNEVQMNADGPNPWMLRSCTSDTKEAATQEDPEQLPELEAHGVSESEGEERPVAEEEIL
310 320 330 340 350 360
430 440 450 460 470 480
pF1KE1 LREFEERRSLRKRSELSQDAEPAGSQETKDSGSQEVLSELRVLSQKLKENHQSRKQKASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LREFEERRSLRKRSELSQDAEPAGSQETKDSGSQEVLSELRVLSQKLKENHQSRKQKASS
370 380 390 400 410 420
490 500 510 520 530 540
pF1KE1 EGTIPQVQREEPAPEEEEPLLLQRPERVQTLEELEELGKEECFQNKELPRPVLEGQQSER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGTIPQVQREEPAPEEEEPLLLQRPERVQTLEELEELGKEECFQNKELPRPVLEGQQSER
430 440 450 460 470 480
550 560 570 580 590 600
pF1KE1 TPNNRPDAPKEKKKKEQMIDLQNLLTTQSPSVKSLAVPTIEELEDEEERNHRQMIKEAFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPNNRPDAPKEKKKKEQMIDLQNLLTTQSPSVKSLAVPTIEELEDEEERNHRQMIKEAFA
490 500 510 520 530 540
610 620 630 640 650 660
pF1KE1 GDDVIRDFLKEKREAVEASKPKDVDLTLPGWGEWGGVGLKPSAKKRRRFLIKAPEGPPRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDDVIRDFLKEKREAVEASKPKDVDLTLPGWGEWGGVGLKPSAKKRRRFLIKAPEGPPRK
550 560 570 580 590 600
670 680 690 700 710 720
pF1KE1 DKNLPNVIINEKRNIHAAAHQVRVLPYPFTHHWQFERTIQTPIGSTWNTQRAFQKLTTPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKNLPNVIINEKRNIHAAAHQVRVLPYPFTHHWQFERTIQTPIGSTWNTQRAFQKLTTPK
610 620 630 640 650 660
730 740 750 760 770
pF1KE1 VVTKPGHIINPIKAEDVGYRSSSRSDLSVIQRNPKRITTRHKKQLKKCSVD
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVTKPGHIINPIKAEDVGYRSSSRSDLSVIQRNPKRITTRHKKQLKKCSVD
670 680 690 700 710
>>XP_016884726 (OMIM: 300508) PREDICTED: U3 small nucleo (627 aa)
initn: 3846 init1: 3846 opt: 3846 Z-score: 2387.3 bits: 452.2 E(85289): 3.1e-126
Smith-Waterman score: 3846; 99.8% identity (100.0% similar) in 593 aa overlap (179-771:35-627)
150 160 170 180 190 200
pF1KE1 LKNRQAEQLVFPLEKEEPAIAPIEHVLSGWKARTPLEQEIFNLLHKNKQPVTDPLLTPVE
.:::::::::::::::::::::::::::::
XP_016 SAGGFLFYMKKRSGLKCGCRMKGDFRKKKSEARTPLEQEIFNLLHKNKQPVTDPLLTPVE
10 20 30 40 50 60
210 220 230 240 250 260
pF1KE1 KASLRAMSLEEAKMRRAELQRARALQSYYEAKARREKKIKSKKYHKVVKKGKAKKALKEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KASLRAMSLEEAKMRRAELQRARALQSYYEAKARREKKIKSKKYHKVVKKGKAKKALKEF
70 80 90 100 110 120
270 280 290 300 310 320
pF1KE1 EQLRKVNPAAALEELEKIEKARMMERMSLKHQNSGKWAKSKAIMAKYDLEARQAMQEQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQLRKVNPAAALEELEKIEKARMMERMSLKHQNSGKWAKSKAIMAKYDLEARQAMQEQLS
130 140 150 160 170 180
330 340 350 360 370 380
pF1KE1 KNKELTQKLQVASESEEEEGGTEDVEELLVPDVVNEVQMNADGPNPWMLRSCTSDTKEAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KNKELTQKLQVASESEEEEGGTEDVEELLVPDVVNEVQMNADGPNPWMLRSCTSDTKEAA
190 200 210 220 230 240
390 400 410 420 430 440
pF1KE1 TQEDPEQLPELEAHGVSESEGEERPVAEEEILLREFEERRSLRKRSELSQDAEPAGSQET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TQEDPEQLPELEAHGVSESEGEERPVAEEEILLREFEERRSLRKRSELSQDAEPAGSQET
250 260 270 280 290 300
450 460 470 480 490 500
pF1KE1 KDSGSQEVLSELRVLSQKLKENHQSRKQKASSEGTIPQVQREEPAPEEEEPLLLQRPERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KDSGSQEVLSELRVLSQKLKENHQSRKQKASSEGTIPQVQREEPAPEEEEPLLLQRPERV
310 320 330 340 350 360
510 520 530 540 550 560
pF1KE1 QTLEELEELGKEECFQNKELPRPVLEGQQSERTPNNRPDAPKEKKKKEQMIDLQNLLTTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QTLEELEELGKEECFQNKELPRPVLEGQQSERTPNNRPDAPKEKKKKEQMIDLQNLLTTQ
370 380 390 400 410 420
570 580 590 600 610 620
pF1KE1 SPSVKSLAVPTIEELEDEEERNHRQMIKEAFAGDDVIRDFLKEKREAVEASKPKDVDLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPSVKSLAVPTIEELEDEEERNHRQMIKEAFAGDDVIRDFLKEKREAVEASKPKDVDLTL
430 440 450 460 470 480
630 640 650 660 670 680
pF1KE1 PGWGEWGGVGLKPSAKKRRRFLIKAPEGPPRKDKNLPNVIINEKRNIHAAAHQVRVLPYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGWGEWGGVGLKPSAKKRRRFLIKAPEGPPRKDKNLPNVIINEKRNIHAAAHQVRVLPYP
490 500 510 520 530 540
690 700 710 720 730 740
pF1KE1 FTHHWQFERTIQTPIGSTWNTQRAFQKLTTPKVVTKPGHIINPIKAEDVGYRSSSRSDLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FTHHWQFERTIQTPIGSTWNTQRAFQKLTTPKVVTKPGHIINPIKAEDVGYRSSSRSDLS
550 560 570 580 590 600
750 760 770
pF1KE1 VIQRNPKRITTRHKKQLKKCSVD
:::::::::::::::::::::::
XP_016 VIQRNPKRITTRHKKQLKKCSVD
610 620
>>XP_016884727 (OMIM: 300508) PREDICTED: U3 small nucleo (449 aa)
initn: 2951 init1: 2951 opt: 2951 Z-score: 1838.4 bits: 350.2 E(85289): 1.2e-95
Smith-Waterman score: 2951; 100.0% identity (100.0% similar) in 449 aa overlap (323-771:1-449)
300 310 320 330 340 350
pF1KE1 ERMSLKHQNSGKWAKSKAIMAKYDLEARQAMQEQLSKNKELTQKLQVASESEEEEGGTED
::::::::::::::::::::::::::::::
XP_016 MQEQLSKNKELTQKLQVASESEEEEGGTED
10 20 30
360 370 380 390 400 410
pF1KE1 VEELLVPDVVNEVQMNADGPNPWMLRSCTSDTKEAATQEDPEQLPELEAHGVSESEGEER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VEELLVPDVVNEVQMNADGPNPWMLRSCTSDTKEAATQEDPEQLPELEAHGVSESEGEER
40 50 60 70 80 90
420 430 440 450 460 470
pF1KE1 PVAEEEILLREFEERRSLRKRSELSQDAEPAGSQETKDSGSQEVLSELRVLSQKLKENHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVAEEEILLREFEERRSLRKRSELSQDAEPAGSQETKDSGSQEVLSELRVLSQKLKENHQ
100 110 120 130 140 150
480 490 500 510 520 530
pF1KE1 SRKQKASSEGTIPQVQREEPAPEEEEPLLLQRPERVQTLEELEELGKEECFQNKELPRPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SRKQKASSEGTIPQVQREEPAPEEEEPLLLQRPERVQTLEELEELGKEECFQNKELPRPV
160 170 180 190 200 210
540 550 560 570 580 590
pF1KE1 LEGQQSERTPNNRPDAPKEKKKKEQMIDLQNLLTTQSPSVKSLAVPTIEELEDEEERNHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LEGQQSERTPNNRPDAPKEKKKKEQMIDLQNLLTTQSPSVKSLAVPTIEELEDEEERNHR
220 230 240 250 260 270
600 610 620 630 640 650
pF1KE1 QMIKEAFAGDDVIRDFLKEKREAVEASKPKDVDLTLPGWGEWGGVGLKPSAKKRRRFLIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QMIKEAFAGDDVIRDFLKEKREAVEASKPKDVDLTLPGWGEWGGVGLKPSAKKRRRFLIK
280 290 300 310 320 330
660 670 680 690 700 710
pF1KE1 APEGPPRKDKNLPNVIINEKRNIHAAAHQVRVLPYPFTHHWQFERTIQTPIGSTWNTQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APEGPPRKDKNLPNVIINEKRNIHAAAHQVRVLPYPFTHHWQFERTIQTPIGSTWNTQRA
340 350 360 370 380 390
720 730 740 750 760 770
pF1KE1 FQKLTTPKVVTKPGHIINPIKAEDVGYRSSSRSDLSVIQRNPKRITTRHKKQLKKCSVD
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FQKLTTPKVVTKPGHIINPIKAEDVGYRSSSRSDLSVIQRNPKRITTRHKKQLKKCSVD
400 410 420 430 440
771 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 02:54:04 2016 done: Mon Nov 7 02:54:06 2016
Total Scan time: 14.640 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]