Result of FASTA (ccds) for
pFN21AE1529
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1529, 147 aa
1>>>pF1KE1529 147 - 147 aa - 147 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9637+/-0.000544; mu= 13.5624+/- 0.033
mean_var=61.0866+/-12.196, 0's: 0 Z-trim(113.8): 69 B-trim: 296 in 1/51
Lambda= 0.164097
statistics sampled from 14315 (14388) to 14315 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.811), E-opt: 0.2 (0.442), width: 16
Scan time: 1.410
The best scores are: opt bits E(32554)
CCDS7252.1 UBE2D1 gene_id:7321|Hs108|chr10 ( 147) 1040 253.5 3.3e-68
CCDS5474.1 UBE2D4 gene_id:51619|Hs108|chr7 ( 147) 970 237.0 3.2e-63
CCDS43369.1 UBE2D2 gene_id:7322|Hs108|chr5 ( 147) 955 233.4 3.8e-62
CCDS3660.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 147) 950 232.2 8.6e-62
CCDS3661.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 148) 950 232.2 8.7e-62
CCDS3659.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 149) 919 224.9 1.4e-59
CCDS47275.1 UBE2D2 gene_id:7322|Hs108|chr5 ( 118) 778 191.5 1.3e-49
CCDS75172.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 118) 770 189.6 4.9e-49
CCDS73139.1 UBE2D1 gene_id:7321|Hs108|chr10 ( 109) 751 185.0 1e-47
CCDS2638.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 193) 670 166.0 9.7e-42
CCDS2637.1 UBE2E2 gene_id:7325|Hs108|chr3 ( 201) 670 166.0 1e-41
CCDS2282.1 UBE2E3 gene_id:10477|Hs108|chr2 ( 207) 669 165.8 1.2e-41
CCDS56244.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 160) 664 164.6 2.2e-41
CCDS2639.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 176) 580 144.7 2.3e-35
CCDS31875.1 UBE2N gene_id:7334|Hs108|chr12 ( 152) 453 114.6 2.3e-26
CCDS14580.1 UBE2A gene_id:7319|Hs108|chrX ( 152) 446 112.9 7.3e-26
CCDS4174.1 UBE2B gene_id:7320|Hs108|chr5 ( 152) 440 111.5 2e-25
CCDS1425.1 UBE2T gene_id:29089|Hs108|chr1 ( 197) 428 108.7 1.7e-24
CCDS13790.1 UBE2L3 gene_id:7332|Hs108|chr22 ( 154) 404 103.0 7.3e-23
CCDS33976.1 UBE2K gene_id:3093|Hs108|chr4 ( 200) 405 103.3 7.7e-23
CCDS58795.1 UBE2L3 gene_id:7332|Hs108|chr22 ( 212) 390 99.8 9.4e-22
CCDS78500.1 UBE2A gene_id:7319|Hs108|chrX ( 119) 374 95.8 8.1e-21
CCDS7960.1 UBE2L6 gene_id:9246|Hs108|chr11 ( 153) 375 96.1 8.5e-21
CCDS58796.1 UBE2L3 gene_id:7332|Hs108|chr22 ( 122) 364 93.5 4.3e-20
CCDS13370.1 UBE2C gene_id:11065|Hs108|chr20 ( 179) 362 93.1 8.1e-20
CCDS33114.1 UBE2S gene_id:27338|Hs108|chr19 ( 222) 356 91.7 2.6e-19
CCDS47043.1 UBE2K gene_id:3093|Hs108|chr4 ( 157) 353 90.9 3.2e-19
CCDS10433.1 UBE2I gene_id:7329|Hs108|chr16 ( 158) 339 87.6 3.2e-18
CCDS13374.1 UBE2C gene_id:11065|Hs108|chr20 ( 140) 335 86.6 5.6e-18
CCDS12987.1 UBE2M gene_id:9040|Hs108|chr19 ( 183) 320 83.2 8.2e-17
CCDS32532.1 UBE2G1 gene_id:7326|Hs108|chr17 ( 170) 318 82.7 1.1e-16
CCDS5814.1 UBE2H gene_id:7328|Hs108|chr7 ( 183) 314 81.7 2.2e-16
CCDS13714.1 UBE2G2 gene_id:7327|Hs108|chr21 ( 165) 302 78.9 1.4e-15
CCDS13372.1 UBE2C gene_id:11065|Hs108|chr20 ( 150) 299 78.1 2.2e-15
CCDS47874.2 UBE2W gene_id:55284|Hs108|chr8 ( 180) 296 77.5 4.1e-15
CCDS47875.2 UBE2W gene_id:55284|Hs108|chr8 ( 191) 296 77.5 4.3e-15
CCDS627.1 UBE2U gene_id:148581|Hs108|chr1 ( 226) 293 76.8 8.1e-15
CCDS2523.1 UBE2F gene_id:140739|Hs108|chr2 ( 185) 286 75.1 2.2e-14
CCDS63175.1 UBE2F gene_id:140739|Hs108|chr2 ( 161) 278 73.2 7.2e-14
CCDS6546.1 UBE2R2 gene_id:54926|Hs108|chr9 ( 238) 274 72.3 1.9e-13
CCDS12030.1 CDC34 gene_id:997|Hs108|chr19 ( 236) 263 69.7 1.2e-12
CCDS47044.1 UBE2K gene_id:3093|Hs108|chr4 ( 149) 260 68.9 1.3e-12
CCDS5021.1 UBE2J1 gene_id:51465|Hs108|chr6 ( 318) 263 69.8 1.5e-12
CCDS33586.1 UBE2G2 gene_id:7327|Hs108|chr21 ( 137) 245 65.3 1.4e-11
CCDS63177.1 UBE2F gene_id:140739|Hs108|chr2 ( 153) 242 64.6 2.6e-11
CCDS11540.2 UBE2Z gene_id:65264|Hs108|chr17 ( 354) 242 64.9 5.1e-11
>>CCDS7252.1 UBE2D1 gene_id:7321|Hs108|chr10 (147 aa)
initn: 1040 init1: 1040 opt: 1040 Z-score: 1338.0 bits: 253.5 E(32554): 3.3e-68
Smith-Waterman score: 1040; 100.0% identity (100.0% similar) in 147 aa overlap (1-147:1-147)
10 20 30 40 50 60
pF1KE1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV
70 80 90 100 110 120
130 140
pF1KE1 PDIAQIYKSDKEKYNRHAREWTQKYAM
:::::::::::::::::::::::::::
CCDS72 PDIAQIYKSDKEKYNRHAREWTQKYAM
130 140
>>CCDS5474.1 UBE2D4 gene_id:51619|Hs108|chr7 (147 aa)
initn: 970 init1: 970 opt: 970 Z-score: 1248.4 bits: 237.0 E(32554): 3.2e-63
Smith-Waterman score: 970; 91.8% identity (97.3% similar) in 147 aa overlap (1-147:1-147)
10 20 30 40 50 60
pF1KE1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDY
::::::::::.::::::::.:::::::::::::::::::: :: :::::::::.::::::
CCDS54 MALKRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PFKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV
70 80 90 100 110 120
130 140
pF1KE1 PDIAQIYKSDKEKYNRHAREWTQKYAM
:.::. ::.:.::::: ::::::::::
CCDS54 PEIAHTYKADREKYNRLAREWTQKYAM
130 140
>>CCDS43369.1 UBE2D2 gene_id:7322|Hs108|chr5 (147 aa)
initn: 955 init1: 955 opt: 955 Z-score: 1229.2 bits: 233.4 E(32554): 3.8e-62
Smith-Waterman score: 955; 89.1% identity (97.3% similar) in 147 aa overlap (1-147:1-147)
10 20 30 40 50 60
pF1KE1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDY
::::::.:::.:: :::::.:::::::::.:::::::::: :: :::::::::.::::::
CCDS43 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV
::::::.::::.::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS43 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
70 80 90 100 110 120
130 140
pF1KE1 PDIAQIYKSDKEKYNRHAREWTQKYAM
:.::.:::.:.::::: ::::::::::
CCDS43 PEIARIYKTDREKYNRIAREWTQKYAM
130 140
>>CCDS3660.1 UBE2D3 gene_id:7323|Hs108|chr4 (147 aa)
initn: 950 init1: 950 opt: 950 Z-score: 1222.8 bits: 232.2 E(32554): 8.6e-62
Smith-Waterman score: 950; 88.4% identity (97.3% similar) in 147 aa overlap (1-147:1-147)
10 20 30 40 50 60
pF1KE1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDY
::::::.:::::: :::::.:::::::::.:::::::::: :: :::::::::.::::::
CCDS36 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV
::::::.::::.::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS36 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
70 80 90 100 110 120
130 140
pF1KE1 PDIAQIYKSDKEKYNRHAREWTQKYAM
:.::.:::.:..:::: .:::::::::
CCDS36 PEIARIYKTDRDKYNRISREWTQKYAM
130 140
>>CCDS3661.1 UBE2D3 gene_id:7323|Hs108|chr4 (148 aa)
initn: 950 init1: 950 opt: 950 Z-score: 1222.8 bits: 232.2 E(32554): 8.7e-62
Smith-Waterman score: 950; 88.4% identity (97.3% similar) in 147 aa overlap (1-147:1-147)
10 20 30 40 50 60
pF1KE1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDY
::::::.:::::: :::::.:::::::::.:::::::::: :: :::::::::.::::::
CCDS36 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV
::::::.::::.::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS36 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
70 80 90 100 110 120
130 140
pF1KE1 PDIAQIYKSDKEKYNRHAREWTQKYAM
:.::.:::.:..:::: :::::.::::
CCDS36 PEIARIYKTDRDKYNRLAREWTEKYAML
130 140
>>CCDS3659.1 UBE2D3 gene_id:7323|Hs108|chr4 (149 aa)
initn: 919 init1: 919 opt: 919 Z-score: 1183.1 bits: 224.9 E(32554): 1.4e-59
Smith-Waterman score: 919; 86.8% identity (96.5% similar) in 144 aa overlap (4-147:6-149)
10 20 30 40 50
pF1KE1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPT
: ..:::::: :::::.:::::::::.:::::::::: :: :::::::::.::::
CCDS36 MLSNRKCLSKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDP
::::::::.::::.::::::::::::::::::::::::::.:::::::::::::::::::
CCDS36 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDP
70 80 90 100 110 120
120 130 140
pF1KE1 LVPDIAQIYKSDKEKYNRHAREWTQKYAM
:::.::.:::.:..:::: .:::::::::
CCDS36 LVPEIARIYKTDRDKYNRISREWTQKYAM
130 140
>>CCDS47275.1 UBE2D2 gene_id:7322|Hs108|chr5 (118 aa)
initn: 778 init1: 778 opt: 778 Z-score: 1004.1 bits: 191.5 E(32554): 1.3e-49
Smith-Waterman score: 778; 89.8% identity (97.5% similar) in 118 aa overlap (30-147:1-118)
10 20 30 40 50 60
pF1KE1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDY
.:::::::::: :: :::::::::.::::::
CCDS47 MFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
10 20 30
70 80 90 100 110 120
pF1KE1 PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV
::::::.::::.::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS47 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
40 50 60 70 80 90
130 140
pF1KE1 PDIAQIYKSDKEKYNRHAREWTQKYAM
:.::.:::.:.::::: ::::::::::
CCDS47 PEIARIYKTDREKYNRIAREWTQKYAM
100 110
>>CCDS75172.1 UBE2D3 gene_id:7323|Hs108|chr4 (118 aa)
initn: 770 init1: 770 opt: 770 Z-score: 993.9 bits: 189.6 E(32554): 4.9e-49
Smith-Waterman score: 770; 88.1% identity (97.5% similar) in 118 aa overlap (30-147:1-118)
10 20 30 40 50 60
pF1KE1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDY
.:::::::::: :: :::::::::.::::::
CCDS75 MFHWQATIMGPNDSPYQGGVFFLTIHFPTDY
10 20 30
70 80 90 100 110 120
pF1KE1 PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV
::::::.::::.::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS75 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV
40 50 60 70 80 90
130 140
pF1KE1 PDIAQIYKSDKEKYNRHAREWTQKYAM
:.::.:::.:..:::: .:::::::::
CCDS75 PEIARIYKTDRDKYNRISREWTQKYAM
100 110
>>CCDS73139.1 UBE2D1 gene_id:7321|Hs108|chr10 (109 aa)
initn: 751 init1: 751 opt: 751 Z-score: 970.1 bits: 185.0 E(32554): 1e-47
Smith-Waterman score: 751; 100.0% identity (100.0% similar) in 107 aa overlap (41-147:3-109)
20 30 40 50 60 70
pF1KE1 SDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFT
::::::::::::::::::::::::::::::
CCDS73 MTPDSAYQGGVFFLTVHFPTDYPFKPPKIAFT
10 20 30
80 90 100 110 120 130
pF1KE1 TKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSD
40 50 60 70 80 90
140
pF1KE1 KEKYNRHAREWTQKYAM
:::::::::::::::::
CCDS73 KEKYNRHAREWTQKYAM
100
>>CCDS2638.1 UBE2E1 gene_id:7324|Hs108|chr3 (193 aa)
initn: 670 init1: 670 opt: 670 Z-score: 862.8 bits: 166.0 E(32554): 9.7e-42
Smith-Waterman score: 670; 62.9% identity (85.3% similar) in 143 aa overlap (4-146:50-192)
10 20 30
pF1KE1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHW
:::::::.:. ::: .::::: ::....:
CCDS26 QQTEKETNTPKKKESKVSMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEW
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE1 QATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQW
..::.::: :.:.:::::: . : .:::::::..: :.::: ::::.: ::::::...:
CCDS26 RSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNW
80 90 100 110 120 130
100 110 120 130 140
pF1KE1 SPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM
:::::.::::::::::: : :: :::: .:: : ... ...: ::.::..::
CCDS26 SPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT
140 150 160 170 180 190
147 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 02:17:52 2016 done: Mon Nov 7 02:17:53 2016
Total Scan time: 1.410 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]