Result of FASTA (ccds) for
pFN21AE1494
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1494, 247 aa
1>>>pF1KE1494 247 - 247 aa - 247 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6319+/-0.000729; mu= 13.1085+/- 0.044
mean_var=75.5659+/-15.154, 0's: 0 Z-trim(109.9): 170 B-trim: 0 in 0/52
Lambda= 0.147541
statistics sampled from 11028 (11207) to 11028 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.726), E-opt: 0.2 (0.344), width: 16
Scan time: 2.060
The best scores are: opt bits E(32554)
CCDS9633.1 GZMB gene_id:3002|Hs108|chr14 ( 247) 1697 370.1 7.8e-103
CCDS9632.1 GZMH gene_id:2999|Hs108|chr14 ( 246) 1172 258.3 3.4e-69
CCDS9631.1 CTSG gene_id:1511|Hs108|chr14 ( 255) 990 219.6 1.6e-57
CCDS9630.1 CMA1 gene_id:1215|Hs108|chr14 ( 247) 826 184.7 5e-47
CCDS59243.1 GZMH gene_id:2999|Hs108|chr14 ( 160) 629 142.7 1.5e-34
CCDS3965.1 GZMA gene_id:3001|Hs108|chr5 ( 262) 582 132.8 2.3e-31
CCDS12823.2 KLK14 gene_id:43847|Hs108|chr19 ( 267) 554 126.8 1.4e-29
CCDS32860.1 PRTN3 gene_id:5657|Hs108|chr19 ( 256) 544 124.7 6.1e-29
CCDS12046.1 CFD gene_id:1675|Hs108|chr19 ( 253) 529 121.5 5.5e-28
CCDS82261.1 CFD gene_id:1675|Hs108|chr19 ( 260) 526 120.8 8.7e-28
CCDS12819.1 KLK11 gene_id:11012|Hs108|chr19 ( 250) 525 120.6 9.8e-28
CCDS12818.1 KLK11 gene_id:11012|Hs108|chr19 ( 282) 525 120.7 1.1e-27
CCDS12822.1 KLK13 gene_id:26085|Hs108|chr19 ( 277) 523 120.2 1.4e-27
CCDS12813.1 KLK8 gene_id:11202|Hs108|chr19 ( 260) 522 120.0 1.6e-27
CCDS5872.1 PRSS1 gene_id:5644|Hs108|chr7 ( 247) 521 119.8 1.8e-27
CCDS42600.1 KLK8 gene_id:11202|Hs108|chr19 ( 305) 520 119.6 2.4e-27
CCDS77203.1 PRSS57 gene_id:400668|Hs108|chr19 ( 282) 515 118.5 4.7e-27
CCDS12041.1 PRSS57 gene_id:400668|Hs108|chr19 ( 283) 515 118.5 4.8e-27
CCDS3964.1 GZMK gene_id:3003|Hs108|chr5 ( 264) 511 117.7 8.1e-27
CCDS12031.1 GZMM gene_id:3004|Hs108|chr19 ( 257) 493 113.8 1.1e-25
CCDS6545.1 PRSS3 gene_id:5646|Hs108|chr9 ( 247) 480 111.0 7.4e-25
CCDS56571.1 PRSS3 gene_id:5646|Hs108|chr9 ( 261) 474 109.8 1.9e-24
CCDS12812.1 KLK7 gene_id:5650|Hs108|chr19 ( 253) 473 109.6 2.1e-24
CCDS12809.1 KLK4 gene_id:9622|Hs108|chr19 ( 254) 472 109.3 2.5e-24
CCDS47958.1 PRSS3 gene_id:5646|Hs108|chr9 ( 304) 470 109.0 3.9e-24
CCDS56570.1 PRSS3 gene_id:5646|Hs108|chr9 ( 240) 468 108.5 4.3e-24
CCDS12811.1 KLK6 gene_id:5653|Hs108|chr19 ( 244) 467 108.3 5e-24
CCDS12816.1 KLK9 gene_id:284366|Hs108|chr19 ( 250) 462 107.2 1.1e-23
CCDS12810.1 KLK5 gene_id:25818|Hs108|chr19 ( 293) 459 106.6 1.9e-23
CCDS83236.1 PRSS2 gene_id:5645|Hs108|chr7 ( 247) 458 106.4 1.9e-23
CCDS76666.1 CMA1 gene_id:1215|Hs108|chr14 ( 136) 432 100.7 5.4e-22
CCDS12821.1 KLK12 gene_id:43849|Hs108|chr19 ( 248) 426 99.6 2.1e-21
CCDS62766.1 KLK15 gene_id:55554|Hs108|chr19 ( 255) 426 99.6 2.2e-21
CCDS12805.1 KLK15 gene_id:55554|Hs108|chr19 ( 256) 424 99.1 3e-21
CCDS13571.1 TMPRSS15 gene_id:5651|Hs108|chr21 (1019) 429 100.5 4.5e-21
CCDS74240.1 GZMM gene_id:3004|Hs108|chr19 ( 218) 416 97.4 8.4e-21
CCDS8812.1 CELA1 gene_id:1990|Hs108|chr12 ( 258) 408 95.7 3.2e-20
CCDS10852.1 CTRL gene_id:1506|Hs108|chr16 ( 264) 405 95.1 5e-20
CCDS5279.1 PLG gene_id:5340|Hs108|chr6 ( 810) 410 96.4 6.1e-20
CCDS12820.1 KLK12 gene_id:43849|Hs108|chr19 ( 254) 399 93.8 1.2e-19
CCDS54297.1 KLK11 gene_id:11012|Hs108|chr19 ( 275) 398 93.6 1.5e-19
CCDS74669.1 PRSS56 gene_id:646960|Hs108|chr2 ( 603) 396 93.4 3.8e-19
CCDS220.1 CELA3A gene_id:10136|Hs108|chr1 ( 270) 383 90.4 1.3e-18
CCDS74856.1 TMPRSS6 gene_id:164656|Hs108|chr22 ( 802) 389 92.0 1.3e-18
CCDS13941.1 TMPRSS6 gene_id:164656|Hs108|chr22 ( 811) 389 92.0 1.4e-18
CCDS44881.1 TMPRSS12 gene_id:283471|Hs108|chr12 ( 348) 382 90.3 1.9e-18
CCDS12045.1 ELANE gene_id:1991|Hs108|chr19 ( 267) 378 89.4 2.7e-18
CCDS219.1 CELA3B gene_id:23436|Hs108|chr1 ( 270) 378 89.4 2.7e-18
CCDS32490.1 CTRB1 gene_id:1504|Hs108|chr16 ( 263) 375 88.7 4.2e-18
CCDS32489.1 CTRB2 gene_id:440387|Hs108|chr16 ( 263) 373 88.3 5.6e-18
>>CCDS9633.1 GZMB gene_id:3002|Hs108|chr14 (247 aa)
initn: 1697 init1: 1697 opt: 1697 Z-score: 1959.7 bits: 370.1 E(32554): 7.8e-103
Smith-Waterman score: 1697; 99.2% identity (100.0% similar) in 247 aa overlap (1-247:1-247)
10 20 30 40 50 60
pF1KE1 MQPILLLLAFLLLPRADAGEIIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIQDDFVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
CCDS96 MQPILLLLAFLLLPRADAGEIIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIRDDFVL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TAAHCWGSSINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 TAAHCWGSSINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 TRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 TRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 YDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRNNGMPPRACTKVSSFVHWI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 YDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRNNGMPPRACTKVSSFVHWI
190 200 210 220 230 240
pF1KE1 KKTMKRH
::::::.
CCDS96 KKTMKRY
>>CCDS9632.1 GZMH gene_id:2999|Hs108|chr14 (246 aa)
initn: 1172 init1: 831 opt: 1172 Z-score: 1355.8 bits: 258.3 E(32554): 3.4e-69
Smith-Waterman score: 1172; 71.1% identity (85.8% similar) in 246 aa overlap (1-246:1-245)
10 20 30 40 50 60
pF1KE1 MQPILLLLAFLLLPRADAGEIIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIQDDFVL
:::.:::::::: : : . :::::::::::::::::.... ..:: :::::.:.. ::::
CCDS96 MQPFLLLLAFLLTPGAGTEEIIGGHEAKPHSRPYMAFVQFLQEKSRKRCGGILVRKDFVL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TAAHCWGSSINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKR
::::: ::::::::::::::::: :::::::::::::::::::::::::::::::::::
CCDS96 TAAHCQGSSINVTLGAHNIKEQERTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 TRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHY
: ::.::::::.:::::::: ::::::: .. .. . ::::: .:::.: .:: ..
CCDS96 TTAVRPLRLPSSKAQVKPGQLCSVAGWGYVS-MSTLATTLQEVLLTVQKDCQCERLFHGN
130 140 150 160 170
190 200 210 220 230 240
pF1KE1 YDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRNNGMPPRACTKVSSFVHWI
:. . :.:::::. .:.:::::::::::. :::::.::: ..: :: . ::: :. ::
CCDS96 YSRATEICVGDPKKTQTGFKGDSGGPLVCKDVAQGILSYGNKKGTPPGVYIKVSHFLPWI
180 190 200 210 220 230
pF1KE1 KKTMKRH
:.::::
CCDS96 KRTMKRL
240
>>CCDS9631.1 CTSG gene_id:1511|Hs108|chr14 (255 aa)
initn: 1032 init1: 663 opt: 990 Z-score: 1146.2 bits: 219.6 E(32554): 1.6e-57
Smith-Waterman score: 990; 57.5% identity (83.0% similar) in 247 aa overlap (1-245:1-243)
10 20 30 40 50 60
pF1KE1 MQPILLLLAFLLLPRADAGEIIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIQDDFVL
:::.:::::::: :.:::::::.:..::::::::::.: . . .::::::...::::
CCDS96 MQPLLLLLAFLLPTGAEAGEIIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TAAHCWGSSINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKR
::::::::.::::::::::...: ::: : ..: : :: :: ....:::::::: :...:
CCDS96 TAAHCWGSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 TRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHY
.: :.:. :: . ..:: :.:::::... . . . ::.::.. ::.::.: :: .
CCDS96 NRNVNPVALPRAQEGLRPGTLCTVAGWGRVS-MRRGTDTLREVQLRVQRDRQC---LRIF
130 140 150 160 170
190 200 210 220 230
pF1KE1 --YDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRNNGMPPRACTKVSSFVH
:: ..:::: . .:..:::::::::.::.::.::::::...:.::.. :.::::.
CCDS96 GSYDPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGVPPEVFTRVSSFLP
180 190 200 210 220 230
240
pF1KE1 WIKKTMKRH
::. ::.
CCDS96 WIRTTMRSFKLLDQMETPL
240 250
>>CCDS9630.1 CMA1 gene_id:1215|Hs108|chr14 (247 aa)
initn: 833 init1: 420 opt: 826 Z-score: 957.7 bits: 184.7 E(32554): 5e-47
Smith-Waterman score: 826; 53.3% identity (74.8% similar) in 246 aa overlap (1-245:3-245)
10 20 30 40 50
pF1KE1 MQPILLLLAFLLLPRADAGEIIGGHEAKPHSRPYMAYL-MIWDQKSLKRCGGFLIQDD
. :. ::: ::: ::.::::::: : ::::::::::: .. .. : ::::::. .
CCDS96 MLLLPLPLLL-FLLCSRAEAGEIIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRN
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 FVLTAAHCWGSSINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERK
:::::::: : ::.:::::::: :.: : : . : . . :: :: ... .:::::.:..:
CCDS96 FVLTAAHCAGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 AKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDL
:. : :: : .::. : ::. : :::::.:. : : ::::::. ... . : : .
CCDS96 ASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQAC-SHF
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 RHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRNNGMPPRACTKVSSFV
: . : ...::::.:. :..:::::::::.: ::::::::::... :: . :..: .
CCDS96 RDF-DHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSDAKPPAVFTRISHYR
180 190 200 210 220 230
240
pF1KE1 HWIKKTMKRH
::.. ..
CCDS96 PWINQILQAN
240
>>CCDS59243.1 GZMH gene_id:2999|Hs108|chr14 (160 aa)
initn: 629 init1: 629 opt: 629 Z-score: 733.9 bits: 142.7 E(32554): 1.5e-34
Smith-Waterman score: 661; 50.4% identity (57.7% similar) in 246 aa overlap (1-246:1-159)
10 20 30 40 50 60
pF1KE1 MQPILLLLAFLLLPRADAGEIIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIQDDFVL
:::.:::::::: : : . :::::::::::::::::.... ..:: :::::.:.. ::::
CCDS59 MQPFLLLLAFLLTPGAGTEEIIGGHEAKPHSRPYMAFVQFLQEKSRKRCGGILVRKDFVL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TAAHCWGSSINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKR
::::: ::::::::::::::::: :::::::::::::::::::::::::::::
CCDS59 TAAHCQGSSINVTLGAHNIKEQERTQQFIPVKRPIPHPAYNPKNFSNDIMLLQ-------
70 80 90 100 110
130 140 150 160 170 180
pF1KE1 TRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHY
CCDS59 ------------------------------------------------------------
190 200 210 220 230 240
pF1KE1 YDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRNNGMPPRACTKVSSFVHWI
:::::::::. :::::.::: ..: :: . ::: :. ::
CCDS59 --------------------GDSGGPLVCKDVAQGILSYGNKKGTPPGVYIKVSHFLPWI
120 130 140 150
pF1KE1 KKTMKRH
:.::::
CCDS59 KRTMKRL
160
>>CCDS3965.1 GZMA gene_id:3001|Hs108|chr5 (262 aa)
initn: 570 init1: 295 opt: 582 Z-score: 676.7 bits: 132.8 E(32554): 2.3e-31
Smith-Waterman score: 582; 42.0% identity (70.8% similar) in 250 aa overlap (6-245:14-259)
10 20 30 40 50
pF1KE1 MQPILLLLAFLLLPRADAGEIIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGF
.....::.:. .::::.:. :::::::. : . :.:.. :.:
CCDS39 MRNSYRFLASSLSVVVSLLLIPEDVCEKIIGGNEVTPHSRPYMVLLSL-DRKTI--CAGA
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 LIQDDFVLTAAHC-WGSSINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIML
:: :.::::::: .. .: ::::.: ..:::.:.. ::. .:.: :.: . .:. :
CCDS39 LIAKDWVLTAAHCNLNKRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDPATREGDLKL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 LQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDR
::: .::: .. : :.::.. .:::: :.:::::.: .. : ::.::..:. ::
CCDS39 LQLMEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVNITII-DR
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 KCESDLRHY-YDSTIEL---CVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRNN--GM
: .: :: .. .: . :.:. . . : .::::.::.:. : .:..:.: .: :
CCDS39 KVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCEGVFRGVTSFGLENKCGD
180 190 200 210 220 230
230 240
pF1KE1 P--PRACTKVSS-FVHWIKKTMKRH
: : . .:. ..:: :.:
CCDS39 PRGPGVYILLSKKHLNWIIMTIKGAV
240 250 260
>>CCDS12823.2 KLK14 gene_id:43847|Hs108|chr19 (267 aa)
initn: 464 init1: 257 opt: 554 Z-score: 644.3 bits: 126.8 E(32554): 1.4e-29
Smith-Waterman score: 554; 37.8% identity (66.5% similar) in 254 aa overlap (5-245:19-265)
10 20 30 40
pF1KE1 MQPILLLLAFLLLPRA------DAGEIIGGHEAKPHSRPYMAYLMI
::: :. .: : : ..::::: :.:..: :.
CCDS12 MSLRVLGSGTWPSAPKMFLLLTALQVLAIAMTQSQEDENKIIGGHTCTRSSQPWQAALLA
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 WDQKSLKRCGGFLIQDDFVLTAAHCWGSSINVTLGAHNIKEQEPTQQFIPVKRPIPHPAY
.. . ::: :.. ..:.::::: ..:.:: ::... : ::: . : : . :: :
CCDS12 GPRRRFL-CGGALLSGQWVITAAHCGRPILQVALGKHNLRRWEATQQVLRVVRQVTHPNY
70 80 90 100 110
110 120 130 140 150
pF1KE1 NPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQ-TAPLGKHSHT
: .. .::.:::::.. :. :::.:... ..: ..:: .: :.::: ..:.... .
CCDS12 NSRTHDNDLMLLQLQQPARIGRAVRPIEV--TQACASPGTSCRVSGWGTISSPIARYPAS
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE1 LQEVKMTVQEDRKCESDLRHYYDSTIE---LCVGDPEIKKTSFKGDSGGPLVCNKVAQGI
:: :..... :. :.. : :: .:.: :. : : .::::::::: ::.
CCDS12 LQCVNINISPDEVCQKA----YPRTITPGMVCAGVPQGGKDSCQGDSGGPLVCRGQLQGL
180 190 200 210 220 230
220 230 240
pF1KE1 VSYGRNN-GMP--PRACTKVSSFVHWIKKTMKRH
::.: . ..: : . :.. .. ::..::.
CCDS12 VSWGMERCALPGYPGVYTNLCKYRSWIEETMRDK
240 250 260
>>CCDS32860.1 PRTN3 gene_id:5657|Hs108|chr19 (256 aa)
initn: 519 init1: 231 opt: 544 Z-score: 633.1 bits: 124.7 E(32554): 6.1e-29
Smith-Waterman score: 544; 38.7% identity (63.3% similar) in 248 aa overlap (6-246:13-249)
10 20 30 40 50
pF1KE1 MQPILLLLAFLLLPRADAGEIIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFL
.:::.:: : :.::.:::::.:::::::: :.. . . . ::: :
CCDS32 MAHRPPSPALASVLLALLLSGAARAAEIVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTL
10 20 30 40 50 60
60 70 80 90 100
pF1KE1 IQDDFVLTAAHCWGSS----INVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDI
:. .:::::::: . .::.:::::.. :::::: . : . . :. .: ::.
CCDS32 IHPSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQ-VFLNNYDAENKLNDV
70 80 90 100 110
110 120 130 140 150 160
pF1KE1 MLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQE
.:.:: :. . .: ..::.. : : : . :::... ...:::...::
CCDS32 LLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVVT
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 DRKCESDLRHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSY---GRNNGMP
.. ..:. :. : :::::::.:. . ::: :. : . .
CCDS32 ----------FFCRPHNICTFVPRRKAGICFGDSGGPLICDGIIQGIDSFVIWGCATRLF
180 190 200 210 220
230 240
pF1KE1 PRACTKVSSFVHWIKKTMKRH
: :.:. .: ::..:..:
CCDS32 PDFFTRVALYVDWIRSTLRRVEAKGRP
230 240 250
>>CCDS12046.1 CFD gene_id:1675|Hs108|chr19 (253 aa)
initn: 394 init1: 247 opt: 529 Z-score: 615.9 bits: 121.5 E(32554): 5.5e-28
Smith-Waterman score: 529; 36.1% identity (64.3% similar) in 249 aa overlap (4-244:9-252)
10 20 30 40 50
pF1KE1 MQPILLLLAFLLLPRADAGEIIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIQ
.:.::. :.:.::.::. :.::::: ... .. . ::: :.
CCDS12 MHSWERLAVLVLLGAAACAAPPRGRILGGREAEAHARPYMASVQL---NGAHLCGGVLVA
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 DDFVLTAAHCW----GSSINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIML
...::.:::: ....: ::::.... ::.... : : .::: .: ....:..:
CCDS12 EQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 LQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDR
::: .:: ::.:: .: :: :.::::: . :.. .::.: . : .
CCDS12 LQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRA
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 KCESDLRHYYDSTI-ELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGR---NNGMPP
:. : ..:..: : . .. : ::::::::::. : .:.:. : .: :
CCDS12 TCNR--RTHHDGAITERLMCAESNRRDSCKGDSGGPLVCGGVLEGVVTSGSRVCGNRKKP
180 190 200 210 220 230
230 240
pF1KE1 RACTKVSSFVHWIKKTMKRH
:.:.:.. :: ...
CCDS12 GIYTRVASYAAWIDSVLA
240 250
>>CCDS82261.1 CFD gene_id:1675|Hs108|chr19 (260 aa)
initn: 419 init1: 247 opt: 526 Z-score: 612.3 bits: 120.8 E(32554): 8.7e-28
Smith-Waterman score: 526; 36.9% identity (65.1% similar) in 241 aa overlap (14-244:29-259)
10 20 30 40
pF1KE1 MQPILLLLAFLLLPRADAGEIIGGHEAKPHSRPYMAYLMIWDQKS
:: :.:.::.::. :.::::: ... ..
CCDS82 MHSWERLAVLVLLGAAACGEEAWAWAAPPR---GRILGGREAEAHARPYMASVQL---NG
10 20 30 40 50
50 60 70 80 90 100
pF1KE1 LKRCGGFLIQDDFVLTAAHCW----GSSINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYN
. ::: :. ...::.:::: ....: ::::.... ::.... : : .::: .
CCDS82 AHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQ
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE1 PKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQ
: ....:..:::: .:: ::.:: .: :: :.::::: . :.. .::
CCDS82 PDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQ
120 130 140 150 160 170
170 180 190 200 210
pF1KE1 EVKMTVQEDRKCESDLRHYYDSTIE---LCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVS
.: . : . :. : ..:..: .:. .. : ::::::::::. : .:.:.
CCDS82 HVLLPVLDRATCNR--RTHHDGAITERLMCA--ESNRRDSCKGDSGGPLVCGGVLEGVVT
180 190 200 210 220 230
220 230 240
pF1KE1 YGR---NNGMPPRACTKVSSFVHWIKKTMKRH
: .: : :.:.:.. :: ...
CCDS82 SGSRVCGNRKKPGIYTRVASYAAWIDSVLA
240 250 260
247 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 22:29:23 2016 done: Sun Nov 6 22:29:23 2016
Total Scan time: 2.060 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]