Result of FASTA (ccds) for
pFN21AE1492
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1492, 846 aa
1>>>pF1KE1492 846 - 846 aa - 846 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.2331+/-0.00105; mu= 6.1737+/- 0.063
mean_var=127.6115+/-25.216, 0's: 0 Z-trim(107.6): 32 B-trim: 22 in 1/50
Lambda= 0.113535
statistics sampled from 9630 (9649) to 9630 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.655), E-opt: 0.2 (0.296), width: 16
Scan time: 4.460
The best scores are: opt bits E(32554)
CCDS1620.1 EXO1 gene_id:9156|Hs108|chr1 ( 846) 5582 926.2 0
CCDS44336.1 EXO1 gene_id:9156|Hs108|chr1 ( 803) 5273 875.6 0
CCDS8010.1 FEN1 gene_id:2237|Hs108|chr11 ( 380) 371 72.6 1.4e-12
>>CCDS1620.1 EXO1 gene_id:9156|Hs108|chr1 (846 aa)
initn: 5582 init1: 5582 opt: 5582 Z-score: 4946.2 bits: 926.2 E(32554): 0
Smith-Waterman score: 5582; 99.8% identity (99.8% similar) in 846 aa overlap (1-846:1-846)
10 20 30 40 50 60
pF1KE1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 KVILKMDQFGNGLEIDQARLGMCRQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 KVILKMDQFGNGLEIDQARLGMCRQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 VLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 VLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLNA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 YEDDVDPETLSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRSHSWDDKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 YEDDVDPETLSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRSHSWDDKT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 CQKSANVSSIWHRNYSPRPESGTVSDAPQLKENPSTVGVERVISTKGLNLPRKSSIVKRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 CQKSANVSSIWHRNYSPRPESGTVSDAPQLKENPSTVGVERVISTKGLNLPRKSSIVKRP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 RSAELSEDDLLSQYSLSFTKKTKKNSSEGNKSLSFSEVFVPDLVNGPTNKKSVSTPPRTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 RSAELSEDDLLSQYSLSFTKKTKKNSSEGNKSLSFSEVFVPDLVNGPTNKKSVSTPPRTR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 NKFATFLQRKNEESGAVVVPGTRSRFFCSSDSTDCVSNKVSIQPLDETAVTDKENNLHES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 NKFATFLQRKNEESGAVVVPGTRSRFFCSSDSTDCVSNKVSIQPLDETAVTDKENNLHES
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE1 EYGDQEGKRLVDTDVARNSSDDIPNNHIPGDHIPDKATVFTDEESYSFESSKFTRTISPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 EYGDQEGKRLVDTDVARNSSDDIPNNHIPGDHIPDKATVFTDEESYSFESSKFTRTISPP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE1 TLGTLRSCFSWSGGLGDFSRTPSPSPSTALQQFRRKSDSPTSLPENNMSDVSQLKSEESS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 TLGTLRSCFSWSGGLGDFSRTPSPSPSTALQQFRRKSDSPTSLPENNMSDVSQLKSEESS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE1 DDESHPLREGACSSQSQESGEFSLQSSNASKLSQCSSKDSDSEESDCNIKLLDSQSDQTS
::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 DDESHPLREEACSSQSQESGEFSLQSSNASKLSQCSSKDSDSEESDCNIKLLDSQSDQTS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE1 KLCLSHFSKKDTPLRNKVPGLYKSSSADSLSTTKIKPLGPARASGLSKKPASIQKRKHHN
:: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 KLRLSHFSKKDTPLRNKVPGLYKSSSADSLSTTKIKPLGPARASGLSKKPASIQKRKHHN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE1 AENKPGLQIKLNELWKNFGFKKDSEKLPPCKKPLSPVRDNIQLTPEAEEDIFNKPECGRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 AENKPGLQIKLNELWKNFGFKKDSEKLPPCKKPLSPVRDNIQLTPEAEEDIFNKPECGRV
790 800 810 820 830 840
pF1KE1 QRAIFQ
::::::
CCDS16 QRAIFQ
>>CCDS44336.1 EXO1 gene_id:9156|Hs108|chr1 (803 aa)
initn: 5273 init1: 5273 opt: 5273 Z-score: 4673.1 bits: 875.6 E(32554): 0
Smith-Waterman score: 5273; 99.8% identity (99.8% similar) in 802 aa overlap (1-802:1-802)
10 20 30 40 50 60
pF1KE1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 KVILKMDQFGNGLEIDQARLGMCRQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KVILKMDQFGNGLEIDQARLGMCRQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 VLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLNA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 YEDDVDPETLSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRSHSWDDKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 YEDDVDPETLSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRSHSWDDKT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 CQKSANVSSIWHRNYSPRPESGTVSDAPQLKENPSTVGVERVISTKGLNLPRKSSIVKRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 CQKSANVSSIWHRNYSPRPESGTVSDAPQLKENPSTVGVERVISTKGLNLPRKSSIVKRP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 RSAELSEDDLLSQYSLSFTKKTKKNSSEGNKSLSFSEVFVPDLVNGPTNKKSVSTPPRTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RSAELSEDDLLSQYSLSFTKKTKKNSSEGNKSLSFSEVFVPDLVNGPTNKKSVSTPPRTR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 NKFATFLQRKNEESGAVVVPGTRSRFFCSSDSTDCVSNKVSIQPLDETAVTDKENNLHES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 NKFATFLQRKNEESGAVVVPGTRSRFFCSSDSTDCVSNKVSIQPLDETAVTDKENNLHES
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE1 EYGDQEGKRLVDTDVARNSSDDIPNNHIPGDHIPDKATVFTDEESYSFESSKFTRTISPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EYGDQEGKRLVDTDVARNSSDDIPNNHIPGDHIPDKATVFTDEESYSFESSKFTRTISPP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE1 TLGTLRSCFSWSGGLGDFSRTPSPSPSTALQQFRRKSDSPTSLPENNMSDVSQLKSEESS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TLGTLRSCFSWSGGLGDFSRTPSPSPSTALQQFRRKSDSPTSLPENNMSDVSQLKSEESS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE1 DDESHPLREGACSSQSQESGEFSLQSSNASKLSQCSSKDSDSEESDCNIKLLDSQSDQTS
::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DDESHPLREEACSSQSQESGEFSLQSSNASKLSQCSSKDSDSEESDCNIKLLDSQSDQTS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE1 KLCLSHFSKKDTPLRNKVPGLYKSSSADSLSTTKIKPLGPARASGLSKKPASIQKRKHHN
:: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KLRLSHFSKKDTPLRNKVPGLYKSSSADSLSTTKIKPLGPARASGLSKKPASIQKRKHHN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE1 AENKPGLQIKLNELWKNFGFKKDSEKLPPCKKPLSPVRDNIQLTPEAEEDIFNKPECGRV
::::::::::::::::::::::
CCDS44 AENKPGLQIKLNELWKNFGFKKF
790 800
>>CCDS8010.1 FEN1 gene_id:2237|Hs108|chr11 (380 aa)
initn: 255 init1: 221 opt: 371 Z-score: 339.1 bits: 72.6 E(32554): 1.4e-12
Smith-Waterman score: 371; 29.8% identity (59.3% similar) in 302 aa overlap (1-290:1-291)
10 20 30 40 50
pF1KE1 MGIQGLLQFIKEASEPIHVRK-----YKGQVVAVDTYCWLHKGAIACAE-----KLAKGE
:::::: ..: ... : .:. : :. ::.:. ... :: . . .::
CCDS80 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 PTDRYVGFCMKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREG
:.. .:. .. . :. .::::. :::: :. : : ..: .:.:. : : . .
CCDS80 TTSHLMGMFYRTIRMM-ENGIKPVYVFDGKP-PQLKSGELAKRSERRAEAEKQLQQAQAA
60 70 80 90 100 110
120 130 140 150 160
pF1KE1 KVSEARECFT-RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIIT
. . : :: : ...:. . . .:. : :: ::.:. : : ::: : : :
CCDS80 GAEQEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAAT
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 EDSDLLAFGCKKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLS
:: : :.:: . :... ... .. .. . : : .. ...:.: .::: : ::
CCDS80 EDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCE
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE1 SLRGIGLAKACKVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVF
:.:::: .: ... .. .: ...... . :::.... .:.. :: :.
CCDS80 SIRGIGPKRAVDLIQ--KHKSIEEIVRRLD---PNKYPVPENWLHK--EAHQLFLEPEVL
240 250 260 270 280
290 300 310 320 330 340
pF1KE1 DPIKRKLIPLNAYEDDVDPETLSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMP
::
CCDS80 DPESVELKWSEPNEEELIKFMCGEKQFSEERIRSGVKRLSKSRQGSTQGRLDDFFKVTGS
290 300 310 320 330 340
846 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 02:13:08 2016 done: Mon Nov 7 02:13:09 2016
Total Scan time: 4.460 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]